prot_P-wetherbeei_contig141.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig141.2.1
Unique Nameprot_P-wetherbeei_contig141.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length447
Homology
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BLAST of mRNA_P-wetherbeei_contig141.2.1 vs. uniprot
Match: A0A6H5JDC8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDC8_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 5.880e-9
Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 0 
Query:   59 RPAITVYEGPPDPSYQEAC-RIEVPYASFLLIYAGKAKARDILQLIREHTLKVVGWSSMMLFARSFEYRKDTWDRFYEAKA 138
            RP + V  G P     EA  R+ VPY  FLL+Y+GKA A+DI++L     +++ G+++ M F  SF+Y  DTW  +Y+ KA
Sbjct:   72 RPRVLVTRGGPPVGAGEAKGRVRVPYKHFLLMYSGKATAKDIVRLAMRGNVELTGFAAFMQFGLSFDYSSDTWQGYYDIKA 152
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig141.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JDC8_9PHAE5.880e-941.98Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig141contigP-wetherbeei_contig141:4610..5950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig141.2.1mRNA_P-wetherbeei_contig141.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig141 4407..6021 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig141.2.1 ID=prot_P-wetherbeei_contig141.2.1|Name=mRNA_P-wetherbeei_contig141.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=447bp
MRFSVLHPLRPFNFLQPHAKFRGQTMHLVFGAEHHTGDEHAADLEVTISF
RDAPDGDPRPAITVYEGPPDPSYQEACRIEVPYASFLLIYAGKAKARDIL
QLIREHTLKVVGWSSMMLFARSFEYRKDTWDRFYEAKARGEGVALPFIDA
GGRKVLCTSAAFRRAEDPVREERDDGAAGDAAAAKTAVAALTAAATAGGG
LATSTTGTIATWDANAYCLLCGHGTSLCRPPSSPPSPMSPSELSGRSGTM
DCVRSSLLVALEGLPHAPRGLLHVPAKSLLQLSPSWLHPWTATAARCFHG
LLRPRSTAPCASPGHFPFIVTLRDPSVKTAAGAAAVAAGAAATAAATAAA
MVAAAAAAARRVTTTATVTARQSASWNVPQEQGWTEACCNFGDWHFMGAA
LRDEWHGAALSAAFESGGPGPHHIPALSDLGAVIRLRHGLTTYASF*
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