prot_P-wetherbeei_contig14088.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14088.1.1
Unique Nameprot_P-wetherbeei_contig14088.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length144
Homology
BLAST of mRNA_P-wetherbeei_contig14088.1.1 vs. uniprot
Match: A0A521YWY3_9PROT (DNA polymerase III subunit chi n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YWY3_9PROT)

HSP 1 Score: 194 bits (493), Expect = 2.250e-61
Identity = 88/137 (64.23%), Postives = 105/137 (76.64%), Query Frame = 0
Query:    1 MTTIDFYFNADDRFEVACRLAGKACAQKKKLLIYVPAAESARRIDNMLWTWQPLSFIPHCQAHDPLAASTPVLITTQASDPPECDVLLNLGDDYPPFFERYPRLLEIVGTGDEERSRGRGRYKFYKERGYPIGNHDL 137
            MT+IDFYFNA+DR +VACRLAGKA AQ+K++LIY P AE A R+D MLWTW  + F+PHC AHDPLAA TPVLI +     P+C+VLLNLG + PP FER+ RLLE+V   + ER  GR RY+FY ERGY I NHDL
Sbjct:    1 MTSIDFYFNAEDRLQVACRLAGKALAQRKRMLIYAPEAEIASRVDRMLWTWPAIGFVPHCAAHDPLAADTPVLIASDPQTSPDCEVLLNLGAECPPHFERFERLLEVVSGEESERQAGRSRYRFYLERGYEIANHDL 137          
BLAST of mRNA_P-wetherbeei_contig14088.1.1 vs. uniprot
Match: A0A1F4F9C5_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4F9C5_9PROT)

HSP 1 Score: 190 bits (482), Expect = 1.060e-59
Identity = 86/137 (62.77%), Postives = 102/137 (74.45%), Query Frame = 0
Query:    1 MTTIDFYFNADDRFEVACRLAGKACAQKKKLLIYVPAAESARRIDNMLWTWQPLSFIPHCQAHDPLAASTPVLITTQASDPPECDVLLNLGDDYPPFFERYPRLLEIVGTGDEERSRGRGRYKFYKERGYPIGNHDL 137
            MT+IDFYFNA DR +VACRLAGKA AQ+K++LIY P AE A R+D +LWTW  + F+PHC  HDPLA  TPVLI +    PP C+VLLNLG   PP FER+ RLLE+V  GD ER  GR RY++Y +RGY I NHDL
Sbjct:    1 MTSIDFYFNAADRLQVACRLAGKAVAQRKRMLIYAPEAEVASRVDRLLWTWPAIGFVPHCTLHDPLAPETPVLIASDPETPPGCEVLLNLGAGCPPHFERFERLLEVVSGGDSERQAGRSRYRYYLDRGYRIANHDL 137          
BLAST of mRNA_P-wetherbeei_contig14088.1.1 vs. uniprot
Match: A0A1F4CWS2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CWS2_9PROT)

HSP 1 Score: 189 bits (480), Expect = 1.820e-59
Identity = 85/137 (62.04%), Postives = 105/137 (76.64%), Query Frame = 0
Query:    1 MTTIDFYFNADDRFEVACRLAGKACAQKKKLLIYVPAAESARRIDNMLWTWQPLSFIPHCQAHDPLAASTPVLITTQASDPPECDVLLNLGDDYPPFFERYPRLLEIVGTGDEERSRGRGRYKFYKERGYPIGNHDL 137
            MT+IDFYFNA DR +VACRLAGKA AQK++LL+Y P  E+A RID MLWTW  + F+PHC  H+ L+A TPVLI +    PP C++LLNLG D PP FER+ RLLE+V TG+EER   R RY++Y+ERGY I +HDL
Sbjct:    1 MTSIDFYFNAADRLQVACRLAGKALAQKQRLLVYAPEPETASRIDRMLWTWPAIGFVPHCAVHERLSADTPVLIASGEETPPGCELLLNLGADCPPHFERFERLLEVVSTGEEERKAARARYRYYQERGYKISSHDL 137          
BLAST of mRNA_P-wetherbeei_contig14088.1.1 vs. uniprot
Match: A0A537BLK9_9PROT (DNA polymerase III subunit chi n=5 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A537BLK9_9PROT)

HSP 1 Score: 182 bits (462), Expect = 1.220e-56
Identity = 85/143 (59.44%), Postives = 104/143 (72.73%), Query Frame = 0
Query:    1 MTTIDFYFNADDRFEVACRLAGKACAQKKKLLIYVPAAESARRIDNMLWTWQPLSFIPHCQAHDPLAASTPVLITTQASDPPECDVLLNLGDDYPPFFERYPRLLEIVGTGDEERSRGRGRYKFYKERGYPIGNHDLAGRGAG 143
            MT+IDFYFNA+DR +VACRLAGKA A+ +++LIY P  E A+RID MLWTW  + F+PHC AHD LAA TPVLI +    PP C++LLNL  + PP F R+ RLLEIV    + R  GR RY++Y +RGY I NHDLA  GAG
Sbjct:    1 MTSIDFYFNAEDRLQVACRLAGKALARGQRMLIYAPEHEIAQRIDKMLWTWPAIGFVPHCAAHDALAAQTPVLIASGDEAPPGCELLLNLAAECPPHFARFERLLEIVAADADARKAGRSRYRYYVDRGYQIANHDLAAEGAG 143          
BLAST of mRNA_P-wetherbeei_contig14088.1.1 vs. uniprot
Match: UPI0019987E3E (DNA polymerase III subunit chi n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=UPI0019987E3E)

HSP 1 Score: 181 bits (460), Expect = 2.300e-56
Identity = 86/140 (61.43%), Postives = 109/140 (77.86%), Query Frame = 0
Query:    1 MTTIDFYFNADDRFEVACRLAGKACAQKKKLLIYVPAAESARRIDNMLWTWQPLSFIPHCQAHDPLAASTPVLITTQASDPP-ECDVLLNLGDDYPPFFERYPRLLEIVGTGDEERSRGRGRYKFYKERGYPIGNHDLAG 139
            MT+IDFYFNA DR  VACRLAGKA  QKK++LIY P AE A++ID +LWT Q +SF+PHC AHDPLAA TP+LI + A+ P   C+VLLNL  + PPFFER+ RLLEIV   +++ + GR R+KFY++RGY + +HDLAG
Sbjct:    1 MTSIDFYFNAADRLGVACRLAGKALQQKKRVLIYAPQAELAQKIDRLLWTAQAVSFMPHCYAHDPLAAQTPILIASDAASPAASCEVLLNLSPECPPFFERHERLLEIVAKEEDQLAEGRARFKFYRDRGYAMRSHDLAG 140          
BLAST of mRNA_P-wetherbeei_contig14088.1.1 vs. uniprot
Match: A0A0S8AYA3_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8AYA3_9PROT)

HSP 1 Score: 181 bits (459), Expect = 3.590e-56
Identity = 85/140 (60.71%), Postives = 104/140 (74.29%), Query Frame = 0
Query:    1 MTTIDFYFNADDRFEVACRLAGKACAQKKKLLIYVPAAESARRIDNMLWTWQPLSFIPHCQAHDPLAASTPVLITTQASDPPECDVLLNLGDDYPPFFERYPRLLEIVGTGDEERSRGRGRYKFYKERGYPIGNHDLAGR 140
            MTTIDFYFNA DR +VACRLAGKA AQ+K+LLIY P A++A+ ID +LWTW    F+PHC AHD LA  TPVLI + A  P   ++LLNL +  PP FER+ RLLE+VG  D+ R  GR RY++Y++RGYPI NHDL  R
Sbjct:    1 MTTIDFYFNAPDRLQVACRLAGKAHAQRKRLLIYAPQADTAQGIDRLLWTWPATGFVPHCFAHDALAQETPVLIASDALIPEAGELLLNLDERCPPHFERFERLLEVVGQDDDARREGRERYRYYRDRGYPIRNHDLTAR 140          
BLAST of mRNA_P-wetherbeei_contig14088.1.1 vs. uniprot
Match: A0A1F3YEE1_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YEE1_9PROT)

HSP 1 Score: 178 bits (452), Expect = 4.170e-55
Identity = 89/139 (64.03%), Postives = 100/139 (71.94%), Query Frame = 0
Query:    1 MTTIDFYFNADDRFEVACRLAGKACAQKKKLLIYVPAAESARRIDNMLWTWQPLSFIPHCQAHDPLAASTPVLITTQASDPP--ECDVLLNLGDDYPPFFERYPRLLEIVGTGDEERSRGRGRYKFYKERGYPIGNHDL 137
            MT IDFYFNA DR  VACRLAGKA  Q  ++LIY P  E A+RID MLWT Q +SFIPHC  HDPLAASTPVLI      PP   C+VLLNL  D PPFFER+ RLLE+V   DE++  GR RY FY++RGY I NHDL
Sbjct:    1 MTAIDFYFNAGDRLGVACRLAGKALQQNMRVLIYAPQPELAQRIDRMLWTAQAVSFIPHCAVHDPLAASTPVLIAGGDGLPPGPACEVLLNLAADCPPFFERHERLLEVVARDDEDKRAGRARYAFYRDRGYAIRNHDL 139          
BLAST of mRNA_P-wetherbeei_contig14088.1.1 vs. uniprot
Match: A0A1F4FDB2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4FDB2_9PROT)

HSP 1 Score: 178 bits (451), Expect = 5.550e-55
Identity = 80/140 (57.14%), Postives = 102/140 (72.86%), Query Frame = 0
Query:    1 MTTIDFYFNADDRFEVACRLAGKACAQKKKLLIYVPAAESARRIDNMLWTWQPLSFIPHCQAHDPLAASTPVLITTQASDPPECDVLLNLGDDYPPFFERYPRLLEIVGTGDEERSRGRGRYKFYKERGYPIGNHDLAGR 140
            MT IDFYFNADDR +VACRLAG+A A+ K++L+Y P  E+A+RID MLWTW  + F+PHC AHDPLA  TPVLI +    P  C++LLNL  + PP FER+ RLLE+V T   +R   R RY+ Y+ RGY + +HDLAG+
Sbjct:    1 MTEIDFYFNADDRMQVACRLAGQAIARNKRVLVYAPQPETAQRIDRMLWTWPAIGFVPHCAAHDPLAPDTPVLIASGTEVPEGCEMLLNLSAECPPHFERFDRLLEVVSTESADREGARARYREYRSRGYQVSHHDLAGQ 140          
BLAST of mRNA_P-wetherbeei_contig14088.1.1 vs. uniprot
Match: A0A177QVZ6_9PROT (DNA polymerase III subunit chi n=1 Tax=Betaproteobacteria bacterium SCGC AG-212-J23 TaxID=1799662 RepID=A0A177QVZ6_9PROT)

HSP 1 Score: 175 bits (443), Expect = 8.060e-54
Identity = 80/138 (57.97%), Postives = 98/138 (71.01%), Query Frame = 0
Query:    1 MTTIDFYFNADDRFEVACRLAGKACAQKKKLLIYVPAAESARRIDNMLWTWQPLSFIPHCQAHDPLAASTPVLITTQASDPPECDVLLNLGDDYPPFFERYPRLLEIVGTGDEERSRGRGRYKFYKERGYPIGNHDLA 138
            MT IDFYFNA+DR +VACRLA KA +Q  ++LIY P  ++A R+D +LWTWQ   F+PHC  HD LAA TPVLI      P    VLLNL  + PP FER+ RL E+VG  DEE+  GRGRY++Y+ERGY I +HDLA
Sbjct:    1 MTNIDFYFNAEDRLQVACRLAAKAASQNTRMLIYAPDGDTASRVDKLLWTWQATGFVPHCAPHDALAAETPVLIAAGEEAPEGFAVLLNLSSECPPHFERFERLCELVGRDDEEKKSGRGRYRYYRERGYKITDHDLA 138          
BLAST of mRNA_P-wetherbeei_contig14088.1.1 vs. uniprot
Match: A0A1F4FBH5_9PROT (Uncharacterized protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4FBH5_9PROT)

HSP 1 Score: 172 bits (435), Expect = 1.460e-52
Identity = 82/138 (59.42%), Postives = 98/138 (71.01%), Query Frame = 0
Query:    1 MTTIDFYFNADDRFEVACRLAGKACAQKKKLLIYVPAAESARRIDNMLWTWQPLSFIPHCQAHDPLAASTPVLITTQASDPPECDVLLNLGDDYPPFFERYPRLLEIVGTGDEERSRGRGRYKFYKERGYPIGNHDLA 138
            MTTIDFYFNA DR +VACRLAGKA  Q K+++IY P  E A+RID +LW W  ++F+PHC AHD LA  TPVLI  +A   P  +VLLNLG D P  FER+ RLLEIV   D +R   R RY +Y++RGY I NHDLA
Sbjct:    1 MTTIDFYFNAADRLQVACRLAGKALEQDKRVVIYAPQPELAQRIDRLLWCWPAIAFVPHCMAHDALADETPVLIAAEAGAAPAREVLLNLGTDCPESFERFERLLEIVSQDDADRKAARARYAWYRDRGYGIRNHDLA 138          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14088.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521YWY3_9PROT2.250e-6164.23DNA polymerase III subunit chi n=1 Tax=Betaproteob... [more]
A0A1F4F9C5_9PROT1.060e-5962.77Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1F4CWS2_9PROT1.820e-5962.04Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A537BLK9_9PROT1.220e-5659.44DNA polymerase III subunit chi n=5 Tax=unclassifie... [more]
UPI0019987E3E2.300e-5661.43DNA polymerase III subunit chi n=1 Tax=Burkholderi... [more]
A0A0S8AYA3_9PROT3.590e-5660.71Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1F3YEE1_9PROT4.170e-5564.03Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1F4FDB2_9PROT5.550e-5557.14Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A177QVZ6_9PROT8.060e-5457.97DNA polymerase III subunit chi n=1 Tax=Betaproteob... [more]
A0A1F4FBH5_9PROT1.460e-5259.42Uncharacterized protein n=2 Tax=unclassified Betap... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007459DNA polymerase III chi subunit, HolCPFAMPF04364DNA_pol3_chicoord: 1..132
e-value: 1.5E-39
score: 135.3
IPR007459DNA polymerase III chi subunit, HolCPANTHERPTHR38767DNA POLYMERASE III SUBUNIT CHIcoord: 1..138
IPR036768DNA polymerase III subunit chi superfamilyGENE3D3.40.50.10110DNA polymerase III subunit chicoord: 1..137
e-value: 4.6E-43
score: 148.6
IPR036768DNA polymerase III subunit chi superfamilySUPERFAMILY102400DNA polymerase III chi subunitcoord: 1..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14088contigP-wetherbeei_contig14088:220..651 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14088.1.1mRNA_P-wetherbeei_contig14088.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14088 220..651 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14088.1.1 ID=prot_P-wetherbeei_contig14088.1.1|Name=mRNA_P-wetherbeei_contig14088.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp
MTTIDFYFNADDRFEVACRLAGKACAQKKKLLIYVPAAESARRIDNMLWT
WQPLSFIPHCQAHDPLAASTPVLITTQASDPPECDVLLNLGDDYPPFFER
YPRLLEIVGTGDEERSRGRGRYKFYKERGYPIGNHDLAGRGAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007459DNA_pol3_chi
IPR036768PolIII_chi_sf