prot_P-wetherbeei_contig14056.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14056.1.1
Unique Nameprot_P-wetherbeei_contig14056.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length100
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig14056.1.1 vs. uniprot
Match: A0A1B6IU08_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6IU08_9HEMI)

HSP 1 Score: 52.4 bits (124), Expect = 8.990e-6
Identity = 27/77 (35.06%), Postives = 38/77 (49.35%), Query Frame = 0 
Query:   18 HKDGVNGLALACDGVSLLSGGVDATVRRWRLSDGECTLILARHFTDSVTCIAANASLFVAGSLDRSLRVFSPDGTVL 94
            HKD V  L+       +LS   D + + WR+ + EC L L  H       +       V GS D+++RV+SPDGT L
Sbjct:  104 HKDNVCSLSAGIQPGFVLSSSWDKSAKLWRVGEQECVLTLTGHELTIWRVLQMANGTIVTGSADKTIRVYSPDGTYL 180
[Close]
BLAST of mRNA_P-wetherbeei_contig14056.1.1 vs. uniprot
Match: A0A4U0TTG2_9PEZI (Uncharacterized protein n=1 Tax=Salinomyces thailandica TaxID=706561 RepID=A0A4U0TTG2_9PEZI)

HSP 1 Score: 50.4 bits (119), Expect = 5.430e-5
Identity = 28/75 (37.33%), Postives = 40/75 (53.33%), Query Frame = 0 
Query:   13 RTINAHKDGVNGLALACDGVSLLSGGVDATVRRWRLSDGECTLILARHFTDSVTCIAANASLFVAGSLDRSLRVF 87
            R I AH D V  L       +L++ G+D TVR W L+ G C  +L  H + SV C+     L   GS+D S+R++
Sbjct:  335 REIPAHTDAVTALDFDAPFGTLVTAGLDDTVRVWDLNAGRCLGMLEGHLS-SVRCLQVEDQLVATGSMDASIRLW 408
[Close]
BLAST of mRNA_P-wetherbeei_contig14056.1.1 vs. uniprot
Match: A0A538S1J2_9BACT (WD40 repeat domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A538S1J2_9BACT)

HSP 1 Score: 50.4 bits (119), Expect = 5.470e-5
Identity = 29/78 (37.18%), Postives = 46/78 (58.97%), Query Frame = 0 
Query:   11 CERTINAHKDGVNGLALACDGVSLLSGGVDATVRRWRLSDG--ECTLILARHFTDSVTCIAANASLFVAGSLDRSLRV 86
            C R ++A    V GLALA +GV LL+ G D T+R W +++G  E T++ A     +V  ++ N +L  AG  D+ +R+
Sbjct:  540 CTRALSASMGPVRGLALAPNGVHLLTAGDDRTIRLWNMNNGANERTILGAEEAFYAVA-VSRNGALIAAGGADQKVRL 616
[Close]
BLAST of mRNA_P-wetherbeei_contig14056.1.1 vs. uniprot
Match: A0A1B6L0B0_9HEMI (PFU domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6L0B0_9HEMI)

HSP 1 Score: 49.7 bits (117), Expect = 9.530e-5
Identity = 26/77 (33.77%), Postives = 36/77 (46.75%), Query Frame = 0 
Query:   18 HKDGVNGLALACDGVSLLSGGVDATVRRWRLSDGECTLILARHFTDSVTCIAANASLFVAGSLDRSLRVFSPDGTVL 94
            HKD V  L        +LS   D + + W + D  C L L  H     + +       V GS D+++RV+SPDGT L
Sbjct:  104 HKDNVCSLNAGIQPGFVLSSSWDKSAKLWHVGDQRCVLTLTGHELTVWSVLQMANGTIVTGSADKTIRVYSPDGTYL 180
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14056.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A1B6IU08_9HEMI8.990e-635.06Uncharacterized protein (Fragment) n=1 Tax=Homalod... [more]
A0A4U0TTG2_9PEZI5.430e-537.33Uncharacterized protein n=1 Tax=Salinomyces thaila... [more]
A0A538S1J2_9BACT5.470e-537.18WD40 repeat domain-containing protein n=1 Tax=Plan... [more]
A0A1B6L0B0_9HEMI9.530e-533.77PFU domain-containing protein (Fragment) n=1 Tax=G... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 8..47
e-value: 3.5E-4
score: 29.9
coord: 50..88
e-value: 0.23
score: 20.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 51..87
e-value: 0.0063
score: 17.3
coord: 10..46
e-value: 0.002
score: 18.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 15..56
score: 11.878597
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..99
e-value: 1.8E-16
score: 61.8
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 15..52
score: 9.414692
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 10..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14056contigP-wetherbeei_contig14056:519..818 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14056.1.1mRNA_P-wetherbeei_contig14056.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14056 519..818 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14056.1.1 ID=prot_P-wetherbeei_contig14056.1.1|Name=mRNA_P-wetherbeei_contig14056.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=100bp
WSLAASGGATCERTINAHKDGVNGLALACDGVSLLSGGVDATVRRWRLSD
GECTLILARHFTDSVTCIAANASLFVAGSLDRSLRVFSPDGTVLHIHRSV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf