prot_P-wetherbeei_contig1398.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1398.1.2
Unique Nameprot_P-wetherbeei_contig1398.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length358
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig1398.1.2 vs. uniprot
Match: D7FZF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF3_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 1.280e-38
Identity = 80/138 (57.97%), Postives = 95/138 (68.84%), Query Frame = 0 
Query:   91 WNPPSLRALPRGGEGFASAWTHFGPLDRFELVKSANRSSNGHGQRLSDTELEWAVLCVEEAEELLQSLRFAEAAAVLERLLERCPSFTLAYAKLALAVLAARGPAAADDAVALLRRAAFLEP-DNEHLRGATELALRL 227
            W PP+LR LPRGGEGF S WTH G  +RFELVKSANRS    G+ LSD ELEWAVLC+EEAEE + ++ F+ AA +LE +L RCP  TLAY +LAL VLAARG   +  A  LL  A  LE  +N HL    +L LR+
Sbjct:   62 WRPPALRPLPRGGEGFFSGWTHLGQSERFELVKSANRSVGPDGEPLSDAELEWAVLCLEEAEERMSAMYFSTAAGILEGVLGRCPGLTLAYYRLALCVLAARGEHGSSQAKLLLDCAMSLEGVENRHLSAGVDLVLRI 199
[Close]
BLAST of mRNA_P-wetherbeei_contig1398.1.2 vs. uniprot
Match: A0A6H5KA32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA32_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 3.040e-36
Identity = 83/150 (55.33%), Postives = 100/150 (66.67%), Query Frame = 0 
Query:   81 SLSDRL--MDSVWNPPSLRALPRGGEGFASAWTHFGPLDRFELVKSANRSSNGHGQRLSDTELEWAVLCVEEAEELLQSLRFAEAAAVLERLLERCPSFTLAYAKLALAVLAARGPAAADDAVALLRRAAFLE-PDNEHLRGATELALRL 227
            +L DRL    + W PP LR LPRGGEGF S WTH G  +RFELVKSANRS    G+ LSD ELEWAVLC+EEAEE + ++ F+ AA +LE +L RCP  TLAY +LAL +LAARG   +  A  LL  A  LE  +N HL    +L LR+
Sbjct:  249 TLEDRLGRWGAGWRPPPLRPLPRGGEGFFSGWTHLGQPERFELVKSANRSVGPDGEPLSDPELEWAVLCLEEAEERMSAMDFSTAAGILEGVLGRCPGLTLAYYRLALCILAARGEHGSRQAKLLLDCAMSLEGAENRHLSAGVDLVLRI 398
[Close]
BLAST of mRNA_P-wetherbeei_contig1398.1.2 vs. uniprot
Match: A0A7S2GJR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GJR6_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.030e-11
Identity = 40/100 (40.00%), Postives = 62/100 (62.00%), Query Frame = 0 
Query:   58 RIRELDV--AIVTAVEPLNRSVAEPSLSDRLMDSVWNPPSLRALPRGGEGFASAWTHFGPLDRFELVKSANRSSNGHGQRLSDTELEWAVLCVEEAEELL 155
            R+R++++   +V     + ++   P L DRL DS++ PP L  L    + ++S W+  G LDRFELVKS+ RS N  G R +++E+EW V+  E AEEL+
Sbjct:   55 RLRQIELLRGVVIREASVGKTPLVPPLDDRLEDSMFQPPPLLPL-HCADKYSSQWSWVGELDRFELVKSSQRSRNIFGHRQTESEIEWIVMSHELAEELM 153
[Close]
BLAST of mRNA_P-wetherbeei_contig1398.1.2 vs. uniprot
Match: A0A5A8C6S4_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C6S4_CAFRO)

HSP 1 Score: 67.4 bits (163), Expect = 1.230e-9
Identity = 53/136 (38.97%), Postives = 75/136 (55.15%), Query Frame = 0 
Query:  134 QRLSDTELEWAVLCVEEAEELLQSLRFAEAAAVLERLLERCPSFTLA---YAKLALAVLAARGPAAAD--------DAVALLRRAAFLEPDNEHLRGATELALRLAAQASVPEELLS-ESFPRSMGDLQALDALAR 257
            ++L+  E++ AV  +E+A++  ++  FA A A L R+L  CP+  LA   +  L L   AAR P AA         DA    + A  LEP+NE LR A +L +R+AA A  P+ L    +FP+S GDL  L  LAR
Sbjct:   18 RKLTHDEIDTAVRALEDADKAAEAFDFARARAQLRRVLGICPNLPLALYRWGALELLREAARSPKAASGLAAQRAPDATRAFQAAVKLEPENEALRAAIQLCIRVAAGAPCPDRLFDLAAFPKSPGDLSVLLELAR 153
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1398.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FZF3_ECTSI1.280e-3857.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KA32_9PHAE3.040e-3655.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2GJR6_9STRA2.030e-1140.00Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A5A8C6S4_CAFRO1.230e-938.97Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 129..229
e-value: 5.0E-5
score: 25.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..357

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1398contigP-wetherbeei_contig1398:17..1530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1398.1.2mRNA_P-wetherbeei_contig1398.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1398 2..1547 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1398.1.2 ID=prot_P-wetherbeei_contig1398.1.2|Name=mRNA_P-wetherbeei_contig1398.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=358bp
MQRSHEAAVVRIETAVEPLRLRASDDVPTARRRESSGRVLQDATDAMLFL
DSADRRRRIRELDVAIVTAVEPLNRSVAEPSLSDRLMDSVWNPPSLRALP
RGGEGFASAWTHFGPLDRFELVKSANRSSNGHGQRLSDTELEWAVLCVEE
AEELLQSLRFAEAAAVLERLLERCPSFTLAYAKLALAVLAARGPAAADDA
VALLRRAAFLEPDNEHLRGATELALRLAAQASVPEELLSESFPRSMGDLQ
ALDALARLAAVPPSTAAAAAGIGQAAAAVASVAAAAAAAAAAAAAAAAAA
AAAAAAGAAAEARQAAAATQDAPEPVAAPVKVAAATRSEAAATRPPEGAE
PVKGATT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf