prot_P-wetherbeei_contig13945.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13945.1.1
Unique Nameprot_P-wetherbeei_contig13945.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length235
Homology
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BLAST of mRNA_P-wetherbeei_contig13945.1.1 vs. uniprot
Match: A0A835YS93_9STRA (CG-1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS93_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.570e-12
Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = 0 
Query:   68 LQEIAARRRLTPDEVVEIIVNYGRYGLTLADAAGSDKPSSGTLVLCHRDHVTRVKNDGIVWMKRSGTNKVREDQSKARSAAGVSIRVCFTRSVVPPEIARRRYTL 172
            ++ +A  R LT  E++ I+  Y  YG+ L     +  P SG L+LC    V+ ++ DGI W+KR  T KVRED    +    V++R  +T +V PP + RRRYTL
Sbjct:   48 VRHVAKCRWLTLQELLVILSRYHAYGIPLV-TCHARPPESGALLLCATKDVSALRQDGIEWVKRPNTKKVREDHVSLKLNGAVAVRGSYTHAVHPPTLHRRRYTL 151
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BLAST of mRNA_P-wetherbeei_contig13945.1.1 vs. uniprot
Match: A0A7S2VVV0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVV0_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.690e-10
Identity = 41/107 (38.32%), Postives = 58/107 (54.21%), Query Frame = 0 
Query:   70 EIAAR----RRLTPDEVVEIIVNYGRYGLTLADAAGSDKPSSGTLVLCHRDHVTRVKNDGIVWMKRSGTNKVREDQSKARSAAGVSIRVCFTRSVVPPEIARRRYTL 172
            +IAAR    R LT +E+ +I++N   YG  ++ +  S  PSSG L L  R      K+DGI+W+K+  ++KVRED  K R      I  C+  S V   + RR Y L
Sbjct:   16 DIAARKAHTRWLTANELEDILLNTKDYGDCISTSRPSSPPSSGALYLYDRSQTKNYKDDGIIWIKKRNSHKVREDHVKLRMDGVNRISGCYVHSAVTETMHRRAYHL 122
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BLAST of mRNA_P-wetherbeei_contig13945.1.1 vs. uniprot
Match: A0A067DQI3_CITSI (CG-1 domain-containing protein n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067DQI3_CITSI)

HSP 1 Score: 53.5 bits (127), Expect = 6.840e-5
Identity = 36/115 (31.30%), Postives = 57/115 (49.57%), Query Frame = 0 
Query:   72 AARRRLTPDEVVEIIVNYGRYGLTLADAAGSDKPSSGTLVLCHRDHVTRVKNDGIVWMKRSGTNKVREDQSKARSAAGVSIRVCFTRSVVPPEIARRRYTLEAPPPAGKLCLLHY 186
            A  R L P+EV+ ++ N+ ++GLT    A   KP SG+L L +   +   + DG +W K   T  V E   +  +A G+++   +      P   RR Y++ A    G L L+HY
Sbjct:   14 AKSRWLKPEEVLFVLQNHEKFGLT---EAPPQKPPSGSLFLFNTRILDFFREDGHIWRKMKNTRIVSEAHERLETADGLALDCYYAFGKQNPNFQRRVYSMAAYL-YGHLVLVHY 124
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13945.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835YS93_9STRA1.570e-1239.05CG-1 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2VVV0_9STRA1.690e-1038.32Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
A0A067DQI3_CITSI6.840e-531.30CG-1 domain-containing protein n=1 Tax=Citrus sine... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005559CG-1 DNA-binding domainSMARTSM01076CG_1_2coord: 67..189
e-value: 0.0036
score: -11.9
IPR005559CG-1 DNA-binding domainPFAMPF03859CG-1coord: 74..187
e-value: 1.1E-15
score: 57.4
IPR005559CG-1 DNA-binding domainPROSITEPS51437CG_1coord: 65..195
score: 15.191332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13945contigP-wetherbeei_contig13945:587..1644 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13945.1.1mRNA_P-wetherbeei_contig13945.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13945 587..1644 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13945.1.1 ID=prot_P-wetherbeei_contig13945.1.1|Name=mRNA_P-wetherbeei_contig13945.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=235bp
MSRRGRIGETGKGSLSLKKEALSRWRGARHMASAVAVPQNTDFSSEEGDT
FDSIFTGGDGCNHSPRLLQEIAARRRLTPDEVVEIIVNYGRYGLTLADAA
GSDKPSSGTLVLCHRDHVTRVKNDGIVWMKRSGTNKVREDQSKARSAAGV
SIRVCFTRSVVPPEIARRRYTLEAPPPAGKLCLLHYFVETTKSATDYRRL
LAAGSAAAAASGDPILALVPIPPSVAAVAKAAARA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005559CG-1_dom