prot_P-wetherbeei_contig1393.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1393.3.1
Unique Nameprot_P-wetherbeei_contig1393.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length243
Homology
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BLAST of mRNA_P-wetherbeei_contig1393.3.1 vs. uniprot
Match: A0A6H5KX93_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX93_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.560e-22
Identity = 57/110 (51.82%), Postives = 70/110 (63.64%), Query Frame = 0 
Query:  133 RAARPNTAALDQLSAGIRRTNERLDREQFKAAEIKLRALGG-GDSITDGYSTGVRPDVVPNTALPYACDRCSDSFAMATRLSDHLRAAHGVIKHASLITPSNAAKKTAGL 241
            RAARPN+AAL  +    RRTN R+DREQF  A+ +LR L   G+ + D +STG RPD       P+ C +C  SF MAT LSDHL  AHG+ KH SLITP+     +AGL
Sbjct:  290 RAARPNSAALVNILRSDRRTNIRMDREQFDGAQTRLRKLAPEGNDVCDNFSTGCRPDKTGKKDHPFVCTQCPMSFPMATLLSDHLERAHGIFKHPSLITPNKTL--SAGL 397
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1393.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KX93_9PHAE1.560e-2251.82C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..139
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 199..220
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 197..225
score: 10.699455

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1393contigP-wetherbeei_contig1393:2284..3012 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1393.3.1mRNA_P-wetherbeei_contig1393.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1393 1912..3112 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1393.3.1 ID=prot_P-wetherbeei_contig1393.3.1|Name=mRNA_P-wetherbeei_contig1393.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=243bp
MRRRSRERSRSREREREQERQHGGFSSIEGDRRPRDARYDDRHGGYGDCD
GGYDRPCRGREERQASSPAANKGSSRAGDGPPPQEPVKKPKIAPGIAAYL
QIASLGRGSAGAAATTGSRPGAPAAADGAGAGRAARPNTAALDQLSAGIR
RTNERLDREQFKAAEIKLRALGGGDSITDGYSTGVRPDVVPNTALPYACD
RCSDSFAMATRLSDHLRAAHGVIKHASLITPSNAAKKTAGLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type