prot_P-wetherbeei_contig1393.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1393.1.1
Unique Nameprot_P-wetherbeei_contig1393.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length244
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1393.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 31..57
e-value: 8.5E-4
score: 28.6
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 31..58
score: 13.544341
NoneNo IPR availablePFAMPF18345zf_CCCH_4coord: 37..55
e-value: 4.3E-7
score: 29.8
NoneNo IPR availableGENE3D1.20.120.1350coord: 30..62
e-value: 9.1E-6
score: 27.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..243
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 35..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1393contigP-wetherbeei_contig1393:49..780 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1393.1.1mRNA_P-wetherbeei_contig1393.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1393 1..865 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1393.1.1 ID=prot_P-wetherbeei_contig1393.1.1|Name=mRNA_P-wetherbeei_contig1393.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=244bp
MTWQLGGNCDGNCGQRHPSQPRAARALLPAASIPAPCKFFAIGRCAKGTS
CPFSHAVTAAVPGLPVPGVPEAAAWGIPPQALPALPQWLTDNVPYVPEQA
APPQQVALPRRSGPVTAEERAVLEARARAVLDKYSLTAHAASRDAPVLIQ
QPLELDDAAETAVEEVDADVLEAAAAAGSAAAGLPFVPLKRKRPQVVEAE
DAKPAAEADGSANGEGGEEGGAEQQRAALRRKRGGAIPTQSPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR036855Znf_CCCH_sf