prot_P-wetherbeei_contig13635.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig13635.1.1
Unique Name	prot_P-wetherbeei_contig13635.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	467

Homology

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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: A0A836CHJ0_9STRA (DNA_mis_repair domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHJ0_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.020e-40
Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = 0

Query:    7 LAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGVHFTHT 126
             +F+ARG VSNANYSTKRA F+LFIN RLV+S ++R+  ES Y+ VLP+G H F YLAL++PA H+DVNVHPTK+EVHFLHEEALLE L +ALE  L  AN SRTFYSQ  LPG+HF  T
Sbjct:  272 FSFRARGFVSNANYSTKRAVFILFINHRLVDSTSIRRTLESVYSSVLPKGTHAFIYLALSMPAPHLDVNVHPTKQEVHFLHEEALLERLRKALEDTLGSANRSRTFYSQSTLPGIHFDAT 391

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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: D8LIJ0_ECTSI (MutL protein homolog 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ0_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.320e-39
Identity = 76/118 (64.41%), Postives = 97/118 (82.20%), Query Frame = 0

Query:    6 RLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGVHF 123
            + AF+A+GLVS A+YS KR+ F+LFINDRLVES +++K  ESAY DVLP+  HPF YL +T+P+ H+DVNVHPTKREVHFLH+E LLE L +A+E++L GAN SRTFYSQ +LP + F
Sbjct:  265 KFAFKAKGLVSGADYSAKRSDFILFINDRLVESPSIKKTVESAYKDVLPKNTHPFVYLGITMPSHHLDVNVHPTKREVHFLHQEELLECLRQAVEQKLAGANQSRTFYSQVILPDMDF 382

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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: A0A7S2RJJ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJJ5_9STRA)

HSP 1 Score: 151 bits (382), Expect = 8.040e-36
Identity = 72/115 (62.61%), Postives = 87/115 (75.65%), Query Frame = 0

Query:    5 GRLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLP 119
            G  AF+ +G VSN NYS KR  F+LFIN RLVES A++K+ ES Y D+LP G+HPF YL+L LP RHVDVNV PTKREVHF+HE+ LL ALF  L+ +L  +N SRTFY Q +LP
Sbjct:  268 GGFAFRVKGYVSNGNYSAKRPAFILFINHRLVESPAIKKSVESVYKDILPSGSHPFVYLSLELPGRHVDVNVSPTKREVHFMHEDELLRALFEMLQAKLESSNQSRTFYCQTLLP 382

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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: A0A0G2JDY9_MOUSE (DNA mismatch repair protein Mlh1 (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=A0A0G2JDY9_MOUSE)

HSP 1 Score: 137 bits (346), Expect = 3.430e-35
Identity = 65/115 (56.52%), Postives = 89/115 (77.39%), Query Frame = 0

Query:    7 LAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGV 121
            LAF+  G +SNANYS K+  F+LFIN RLVESAA+RKA E+ YA  LP+  HPF YL+L +  ++VDVNVHPTK EVHFLHEE++L+ + + +E +L G+N SR +++Q +LPG+
Sbjct:   33 LAFKMNGYISNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQTLLPGL 147

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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: A0A3M6U441_POCDA (DNA_mis_repair domain-containing protein n=4 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6U441_POCDA)

HSP 1 Score: 145 bits (365), Expect = 1.060e-33
Identity = 68/123 (55.28%), Postives = 93/123 (75.61%), Query Frame = 0

Query:    6 RLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGVHFTHTAA 128
            R AF+  G +SNANYS K+  F+LFIN RLV+S+A+RKA ES Y   LP+ +HPF YL+L +   +VDVNVHPTK EVHFLHE++++EA+ +  E +L GAN SRT+++Q +LPG+  T T+A
Sbjct:  243 RFAFKMHGYISNANYSVKKLQFLLFINHRLVDSSAMRKAIESLYEAYLPKNSHPFVYLSLEISPSNVDVNVHPTKHEVHFLHEDSIIEAIQQTFEEKLLGANSSRTYFTQTLLPGISVTDTSA 365

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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: A0A8B7XIU5_ACAPL (DNA mismatch repair protein Mlh1-like isoform X1 n=3 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XIU5_ACAPL)

HSP 1 Score: 144 bits (362), Expect = 2.600e-33
Identity = 67/114 (58.77%), Postives = 92/114 (80.70%), Query Frame = 0

Query:    6 RLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLP 119
            +LAF+ RG +SNANYS K+  F+LFIN RLVES+++RKA ES YA  LP+G HPF YL+L +   +VDVNVHPTK+EVHFLHEEA++E + +++E++L G N SRT+++Q +LP
Sbjct:  235 KLAFKLRGFISNANYSVKKCIFLLFINHRLVESSSLRKAIESVYATYLPKGTHPFLYLSLEISPNNVDVNVHPTKQEVHFLHEEAIIEDIQQSIEQKLLGCNFSRTYFTQALLP 348

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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: UPI00145898EE (DNA mismatch repair protein Mlh1-like n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI00145898EE)

HSP 1 Score: 143 bits (361), Expect = 3.030e-33
Identity = 66/119 (55.46%), Postives = 94/119 (78.99%), Query Frame = 0

Query:    6 RLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGVHFT 124
            +L+F+  G V+NANYS K+ T +LFIN RLV+S+A+RK+ +S Y   LP+ +HPF YL+L +  ++VDVNVHPTK EVHFLHE+A++E++ +A+E +L G+N SRTFY+Q +LPG  FT
Sbjct:  241 KLSFKVHGFVTNANYSMKKCTMLLFINHRLVDSSALRKSLDSVYQAYLPKNSHPFMYLSLEIAPQNVDVNVHPTKHEVHFLHEDAIIESVQQAVEAKLLGSNSSRTFYTQALLPGASFT 359

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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: K8YSR7_NANGC (DNA mismatch repair protein MLH1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSR7_NANGC)

HSP 1 Score: 141 bits (355), Expect = 3.460e-33
Identity = 69/115 (60.00%), Postives = 85/115 (73.91%), Query Frame = 0

Query:    7 LAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGV 121
            L+F+A G VSNAN++ K+  F+LFIN+R+VES A+++  ES YA +LP   HPF YLAL LP  HVDVNVHPTKREVHFLHE+ LL  L   LE  LRGAN SRTFY + +  G+
Sbjct:  235 LSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGL 349

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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: UPI0009E65599 (DNA mismatch repair protein Mlh1-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E65599)

HSP 1 Score: 143 bits (361), Expect = 3.940e-33
Identity = 67/123 (54.47%), Postives = 94/123 (76.42%), Query Frame = 0

Query:    6 RLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGVHFTHTAA 128
            R AF+  G +SNANYS K+  F+LFIN RLV+S+++RK+ ES Y   +P+ +HPF YL+L +   +VDVNVHPTK EVHFLHE++++EA+ +A E +L GAN SRT+++Q +LPGV  T T+A
Sbjct:  266 RYAFKMHGYISNANYSVKKLQFLLFINHRLVDSSSMRKSIESLYEAYIPKNSHPFVYLSLEIAPSNVDVNVHPTKHEVHFLHEDSIIEAIQKAFEEKLLGANSSRTYFTQTLLPGVAVTDTSA 388

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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: A0A8J9ZMZ4_BRALA (MLH1 protein n=2 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZMZ4_BRALA)

HSP 1 Score: 141 bits (355), Expect = 4.080e-33
Identity = 66/116 (56.90%), Postives = 88/116 (75.86%), Query Frame = 0

Query:    6 RLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGV 121
            RLAF  +G +SNANYSTK+  F+LFIN RLV+S A+RKA E+ Y+  LP+  HPF Y+++ +   HVDVNVHPTK EVHFLHE+ ++EA+ + +E  L G N SRTF++Q +LPGV
Sbjct:  234 RLAFSMKGHISNANYSTKKFIFLLFINHRLVDSTALRKALEAVYSTYLPKNMHPFVYMSVEIMPSHVDVNVHPTKHEVHFLHEDVIIEAIQKQVETSLLGCNSSRTFFTQALLPGV 349

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CHJ0_9STRA	1.020e-40	67.50	DNA_mis_repair domain-containing protein n=1 Tax=T...	[more]
D8LIJ0_ECTSI	1.320e-39	64.41	MutL protein homolog 1 n=1 Tax=Ectocarpus siliculo...	[more]
A0A7S2RJJ5_9STRA	8.040e-36	62.61	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A0G2JDY9_MOUSE	3.430e-35	56.52	DNA mismatch repair protein Mlh1 (Fragment) n=1 Ta...	[more]
A0A3M6U441_POCDA	1.060e-33	55.28	DNA_mis_repair domain-containing protein n=4 Tax=P...	[more]
A0A8B7XIU5_ACAPL	2.600e-33	58.77	DNA mismatch repair protein Mlh1-like isoform X1 n...	[more]
UPI00145898EE	3.030e-33	55.46	DNA mismatch repair protein Mlh1-like n=2 Tax=Pect...	[more]
K8YSR7_NANGC	3.460e-33	60.00	DNA mismatch repair protein MLH1 (Fragment) n=1 Ta...	[more]
UPI0009E65599	3.940e-33	54.47	DNA mismatch repair protein Mlh1-like n=1 Tax=Orbi...	[more]
A0A8J9ZMZ4_BRALA	4.080e-33	56.90	MLH1 protein n=2 Tax=Branchiostoma lanceolatum Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013507	DNA mismatch repair protein, S5 domain 2-like	SMART	SM01340	DNA_mis_repair_2	coord: 1..104 e-value: 1.6E-29 score: 114.1
IPR013507	DNA mismatch repair protein, S5 domain 2-like	PFAM	PF01119	DNA_mis_repair	coord: 9..103 e-value: 2.9E-27 score: 94.7
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 3..116 e-value: 1.6E-34 score: 120.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..340
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 388..436
None	No IPR available	PANTHER	PTHR10073:SF12	DNA MISMATCH REPAIR PROTEIN MLH1	coord: 8..300
IPR038973	DNA mismatch repair protein MutL/Mlh/Pms	PANTHER	PTHR10073	DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL	coord: 8..300
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 9..103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig13635	contig	P-wetherbeei_contig13635:115..1814 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig13635.1.1	mRNA_P-wetherbeei_contig13635.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig13635 115..1815 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig13635.1.1 ID=prot_P-wetherbeei_contig13635.1.1|Name=mRNA_P-wetherbeei_contig13635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=467bp
GGAGGRLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYA
DVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALE
RRLRGANDSRTFYSQPVLPGVHFTHTAAAASGATSTAAAAAMGAGAGASF
GGGGGGGGGGAGAVSAGSRGGGASSTGAAASGPSGGARTSQAAAVAAAAG
AGSDGEDDDGEESQEIGGRSELEGRPAGGASAGKRKALTAVPRQAARPLE
DLARGGDRSGGSSSMGNGSGPRKKPYAPNKLVRTDASAASIDSFFKPLRT
GEGFAAGAAGGEAGGHRGGGAGGSHGGSSRASRSGGSDDSAVFLAPDADG
TCACPEPMDEEEVIGLDVLSDDDDVLLVAGLNPMGEDARPEEGATTATVT
RPSSGSAAAAAAISAGAAATSAAPAQRPQTHRRRAAAMPFGFVGRCGCCG
KAARGGAGGTARTTPPD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013507	DNA_mismatch_S5_2-like
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR038973	MutL/Mlh/Pms
IPR020568	Ribosomal_S5_D2-typ_fold