prot_P-wetherbeei_contig13631.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13631.1.1
Unique Nameprot_P-wetherbeei_contig13631.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length166
Homology
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BLAST of mRNA_P-wetherbeei_contig13631.1.1 vs. uniprot
Match: A0A6H5JEA8_9PHAE (PWWP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA8_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 1.530e-25
Identity = 59/145 (40.69%), Postives = 84/145 (57.93%), Query Frame = 0 
Query:   22 RWERERDDVTLLQVQGALYGAMSESALEREAFRQGVAAARTVPAMAAAVFAFSSRVTAVLPLLLDQENEEKAVLYGPPGDVGNASNQAFFLKVTPTGEVVWARLQGFPWWPALVVRPDSFRLAAVLAWTGDRMVTFMGESDQYRV 166
            RWE ER+ + L  +   L GA+S     REA+RQ + AART+  +A  V++  +    VLP L +Q+ +E+A++           NQA  ++ + T E+VWARL GFPWWPALVV+P+       L   GDR+V FM E   +RV
Sbjct:  724 RWEMEREGIALANLSAGLQGALSTDPAFREAWRQEMLAARTLAGVATLVYSLLASAAGVLPALQEQDMQEQALI-----------NQALHVRCSSTSEIVWARLHGFPWWPALVVKPEGVGFQRSLLEAGDRLVVFMNEQQHFRV 857
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BLAST of mRNA_P-wetherbeei_contig13631.1.1 vs. uniprot
Match: D8LRK0_ECTSI (Nucleosome/chromatin assembly factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK0_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.280e-19
Identity = 49/119 (41.18%), Postives = 75/119 (63.03%), Query Frame = 0 
Query:   22 RWERERDDVTLLQVQGALYGAMSESALEREAFRQGVAAARTVPAMAAAVFAFSSRVTAVLPLLLDQENEEKAVLYGPPGDVGNASNQAFFLKVTPTGEVVWARLQGFPWWPALVVRPDS 140
            RWE ER+ + L  +   L GA+S     REA+R+ + AART+  +A  V++  +    VLP L +Q+ +E+A++     +   A+NQA  ++ + T E+VWARL GFPWWPALVV+P+ 
Sbjct: 1431 RWEMEREGIALANLSAELQGALSTDPAFREAWRKEMLAARTLAGVATLVYSLLTSAAGVLPALQEQDMQEQALI-----NQDLATNQALRVRCSSTSEIVWARLHGFPWWPALVVKPEG 1544
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BLAST of mRNA_P-wetherbeei_contig13631.1.1 vs. uniprot
Match: A0A7S3ZNS7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNS7_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 5.180e-6
Identity = 24/56 (42.86%), Postives = 33/56 (58.93%), Query Frame = 0 
Query:  109 AFFLKVTPTGEVVWARLQGFPWWPALVVRPDSFRLAAVLAWTGDRMVTFMGESDQY 164
            A ++   PTGE+VWAR++G+PWWPA    P        L   G  ++ F+GES QY
Sbjct:  746 AVYIPSKPTGELVWARIRGYPWWPARRHEPTRQDFKEALQARGRSLIVFVGESVQY 801
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BLAST of mRNA_P-wetherbeei_contig13631.1.1 vs. uniprot
Match: A0A8J2X491_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X491_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 5.420e-6
Identity = 24/56 (42.86%), Postives = 33/56 (58.93%), Query Frame = 0 
Query:  109 AFFLKVTPTGEVVWARLQGFPWWPALVVRPDSFRLAAVLAWTGDRMVTFMGESDQY 164
            A ++   PTGE+VWAR++G+PWWPA    P        L   G  ++ F+GES QY
Sbjct: 1284 AVYIPSKPTGELVWARIRGYPWWPARRHEPTRQDFKEALQARGRSLIVFVGESVQY 1339
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13631.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JEA8_9PHAE1.530e-2540.69PWWP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LRK0_ECTSI1.280e-1941.18Nucleosome/chromatin assembly factor group n=1 Tax... [more]
A0A7S3ZNS7_9STRA5.180e-642.86Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2X491_9STRA5.420e-642.86Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000313PWWP domainSMARTSM00293PWWP_4coord: 115..159
e-value: 0.0088
score: 20.6
IPR000313PWWP domainPFAMPF00855PWWPcoord: 118..163
e-value: 3.2E-8
score: 34.0
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 117..166
score: 13.657097
NoneNo IPR availableGENE3D2.30.30.140coord: 113..166
e-value: 7.0E-9
score: 37.2
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 117..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13631contigP-wetherbeei_contig13631:76..573 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13631.1.1mRNA_P-wetherbeei_contig13631.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13631 76..573 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13631.1.1 ID=prot_P-wetherbeei_contig13631.1.1|Name=mRNA_P-wetherbeei_contig13631.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
EADNDAEAETEYEVEYEDDQLRWERERDDVTLLQVQGALYGAMSESALER
EAFRQGVAAARTVPAMAAAVFAFSSRVTAVLPLLLDQENEEKAVLYGPPG
DVGNASNQAFFLKVTPTGEVVWARLQGFPWWPALVVRPDSFRLAAVLAWT
GDRMVTFMGESDQYRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000313PWWP_dom