prot_P-wetherbeei_contig13625.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13625.1.1
Unique Nameprot_P-wetherbeei_contig13625.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length188
Homology
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BLAST of mRNA_P-wetherbeei_contig13625.1.1 vs. uniprot
Match: A0A835YYE4_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYE4_9STRA)

HSP 1 Score: 180 bits (457), Expect = 9.700e-53
Identity = 158/193 (81.87%), Postives = 166/193 (86.01%), Query Frame = 0 
Query:    1 YIHCHV-FIKQ----QVEKLSTHAYGCRVIQRILEHCVDEQKDPVLREINVAFSSLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEERGALIQHLLYAANDGH-SLLQVMVCDPYANYVVQKIIDVADETQRETIIDEIRTHAAQLKRYTFGKHIISRLEKISGKKM 187
            Y+H H+ FI      QVEKLSTHAYGCRVIQRILEHC+D Q+DPVL EI  +FS+LIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RGALI HL +   +G  SLLQVMVCDPYANYVVQKIIDVAD  QRE II EIR HAAQLKRYTFGKHIISRLEKISGKKM
Sbjct:  141 YLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 333
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BLAST of mRNA_P-wetherbeei_contig13625.1.1 vs. uniprot
Match: D7FWZ0_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWZ0_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 1.790e-50
Identity = 155/192 (80.73%), Postives = 165/192 (85.94%), Query Frame = 0 
Query:    1 YIHCHV-FIKQ----QVEKLSTHAYGCRVIQRILEHCVDEQKDPVLREINVAFSSLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEERGALIQHLLYAANDGHSLLQVMVCDPYANYVVQKIIDVADETQRETIIDEIRTHAAQLKRYTFGKHIISRLEKISGKKM 187
            Y+H H+ FI      QVEKLS HAYGCRVIQRILEHC+DEQK  +L EI  +FS LIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      LIQHLLY  +DG SLLQVMVCDPYANYVVQKIIDVAD+ QR+TII EI+ HAAQLKRYTFGKHIISRLEK+SGKKM
Sbjct:  352 YLHSHIQFIIDGFVGQVEKLSMHAYGCRVIQRILEHCIDEQKQVILEEIKDSFSVLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIQHLLYGHSDGTSLLQVMVCDPYANYVVQKIIDVADQEQRQTIIMEIKAHAAQLKRYTFGKHIISRLEKLSGKKM 543
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BLAST of mRNA_P-wetherbeei_contig13625.1.1 vs. uniprot
Match: A0A6H5KS31_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS31_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 1.340e-43
Identity = 148/192 (77.08%), Postives = 157/192 (81.77%), Query Frame = 0 
Query:    1 YIHCHV-FIKQ----QVEKLSTHAYGCRVIQRILEHCVDEQKDPVLREINVAFSSLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEERGALIQHLLYAANDGHSLLQVMVCDPYANYVVQKIIDVADETQRETIIDEIRTHAAQLKRYTFGKHIISRLEKISGKKM 187
            Y+H H+ FI      QVEKLS HAYGCRVIQRILEHC+DEQK  +L EI           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      LIQHLLY  +DG SLLQVMVCDPYANYVVQKIIDVAD+ QR+TII EI+ HAAQLKRYTFGKHIISRLEK+SGKKM
Sbjct:  647 YLHSHIQFIIDGFVGQVEKLSMHAYGCRVIQRILEHCIDEQKQVILEEIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIQHLLYGHSDGTSLLQVMVCDPYANYVVQKIIDVADQEQRQTIIMEIKAHAAQLKRYTFGKHIISRLEKLSGKKM 838
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BLAST of mRNA_P-wetherbeei_contig13625.1.1 vs. uniprot
Match: W7T8B7_9STRA (Pumilio RNA-binding repeat containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T8B7_9STRA)

HSP 1 Score: 120 bits (302), Expect = 6.950e-31
Identity = 122/176 (69.32%), Postives = 139/176 (78.98%), Query Frame = 0 
Query:   12 VEKLSTHAYGCRVIQRILEHCVDEQKDPVLREINVAFSSLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEERGALIQHLLYAANDGHSLLQVMVCDPYANYVVQKIIDVADETQRETIIDEIRTHAAQLKRYTFGKHIISRLEKISGKKM 187
            VEK STH YGCRVIQRILEHC   QK  +L EI  + S+LIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           + +  D  SLLQVMV DPY NYVVQKI+D+AD+ Q+E +   +R+ A QL+RYT+GKHI+ RLEKISG+K+
Sbjct:   36 VEKFSTHPYGCRVIQRILEHCTGAQKSAILDEIRKSSSTLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRSVLDKSSLLQVMVRDPYGNYVVQKILDIADDRQQEALCTYLRSCAPQLRRYTYGKHILVRLEKISGEKL 211
[Close]
BLAST of mRNA_P-wetherbeei_contig13625.1.1 vs. uniprot
Match: A0A024UJZ7_9STRA (PUM-HD domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJZ7_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.360e-30
Identity = 67/179 (37.43%), Postives = 98/179 (54.75%), Query Frame = 0 
Query:    9 KQQVEKLSTHAYGCRVIQRILEHCVDEQKDPVLREINVAFSSLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEERGALIQHLLYAANDGHSLLQVMVCDPYANYVVQKIIDVADETQRETIIDEIRTHAAQLKRYTFGKHIISRLEKISGKKM 187
            +  V+ +STH YGCRVIQR+LE C DEQ  P+LREI  ++  L+ DQ                                                   ++   ++ H+L ++++G   LQ+M+ D YANYVVQK+IDVAD T+R+ +   I++HAA LKRYT GKHI++RLEK++G+K+
Sbjct:  627 ENNVDTMSTHPYGCRVIQRVLEKCSDEQMAPILREIQDSYGLLVNDQYGNYVIQHVLQHGPPSQRTALINRIYPDIIRFSYHKFSSNVIEKCLSYASVKQLRVIMHHILNSSDNGECPLQIMMKDQYANYVVQKLIDVADSTERDKMAAIIKSHAANLKRYTHGKHILNRLEKLTGQKI 805
[Close]
BLAST of mRNA_P-wetherbeei_contig13625.1.1 vs. uniprot
Match: A0A4D9CQB4_9STRA (PUM-HD domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQB4_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.530e-28
Identity = 122/176 (69.32%), Postives = 139/176 (78.98%), Query Frame = 0 
Query:   12 VEKLSTHAYGCRVIQRILEHCVDEQKDPVLREINVAFSSLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEERGALIQHLLYAANDGHSLLQVMVCDPYANYVVQKIIDVADETQRETIIDEIRTHAAQLKRYTFGKHIISRLEKISGKKM 187
            VEK STH YGCRVIQRILEHC   QK  +L EI  + S+LIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           + +  D  SLLQVMV DPY NYVVQKI+D+AD+ Q+E +   +R+ A QL+RYT+GKHI+ RLEKISG+K+
Sbjct:  658 VEKFSTHPYGCRVIQRILEHCTGAQKSAILDEIRKSSSTLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRSVLDKSSLLQVMVRDPYGNYVVQKILDIADDRQQEALCTYLRSCAPQLRRYTYGKHILVRLEKISGEKL 833
[Close]
BLAST of mRNA_P-wetherbeei_contig13625.1.1 vs. uniprot
Match: A0A6G0XDT3_9STRA (PUM-HD domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDT3_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.510e-26
Identity = 80/176 (45.45%), Postives = 106/176 (60.23%), Query Frame = 0 
Query:   12 VEKLSTHAYGCRVIQRILEHCVDEQKDPVLREINVAFSSLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEERGALIQHLLYAANDGHSLLQVMVCDPYANYVVQKIIDVADETQRETIIDEIRTHAAQLKRYTFGKHIISRLEKISGKKM 187
            V  ++TH YGCRVIQR+LEHC D Q   +L EI  A S L++DQ XXXXXXXXXXXX                                      E+   +++H++  A+DG   LQVM+ D YANYVVQK+IDVAD ++R+ ++  I+T A  LKR+TFGKHI++RLEK++G KM
Sbjct:  561 VYSMATHPYGCRVIQRVLEHCSDVQMATILVEIQDACSLLVEDQYXXXXXXXXXXXXQPAERSALINKIYPDIVRFSYHKFASNVIEKCLMYASVEQLHVIMRHVM-DASDGECPLQVMMKDQYANYVVQKLIDVADASERDKMVAIIKTQATLLKRFTFGKHILNRLEKLTGYKM 735
[Close]
BLAST of mRNA_P-wetherbeei_contig13625.1.1 vs. uniprot
Match: A0A067D2Q5_SAPPC (PUM-HD domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067D2Q5_SAPPC)

HSP 1 Score: 114 bits (286), Expect = 3.480e-26
Identity = 88/176 (50.00%), Postives = 115/176 (65.34%), Query Frame = 0 
Query:   12 VEKLSTHAYGCRVIQRILEHCVDEQKDPVLREINVAFSSLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEERGALIQHLLYAANDGHSLLQVMVCDPYANYVVQKIIDVADETQRETIIDEIRTHAAQLKRYTFGKHIISRLEKISGKKM 187
            V  L+TH YGCRVIQR+LEHC + Q  P+L+EI+     L++DQXXXXXXXXXXXXXXXXXXXXXXXX                            +   ++ H++ A   G   LQVM+ D YANYVVQK+IDVAD  +RE ++  I+T A+ LKR+ FGKHI++RLEK++G+K+
Sbjct:  596 VYSLATHPYGCRVIQRVLEHCTEAQMAPILKEIHDCCCLLVEDQXXXXXXXXXXXXXXXXXXXXXXXXVYPDIVRFSYHKFASNVIEKCLMYASVHQLHVIVAHVMEANERGECPLQVMMKDQYANYVVQKLIDVADAEERERMVVIIKTQASHLKRFNFGKHILNRLEKLTGQKI 771
[Close]
BLAST of mRNA_P-wetherbeei_contig13625.1.1 vs. uniprot
Match: A0A8C2IKC2_CYPCA (Pumilio RNA-binding family member 1 n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2IKC2_CYPCA)

HSP 1 Score: 112 bits (281), Expect = 1.740e-25
Identity = 91/178 (51.12%), Postives = 111/178 (62.36%), Query Frame = 0 
Query:    9 KQQVEKLSTHAYGCRVIQRILEHCVDEQKDPVLREINVAFSSLIQ-----DQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEERGALIQHLLYAANDGHSLLQVMVCDPYANYVVQKIIDVADETQRETIIDEIRTHAAQLKRYTFGKHIISRLEK 181
            K QV  LSTH YGCRVIQRILEHC+ EQ  P+L EI+     L+Q     DQXXXXXXXXXXXXXXXXXXXXXX                            + ER  LI  +   A+  HS L  M+ D YANYVVQK+IDVA+ TQR+ ++ +IR H A L++YT+GKHI+++LEK
Sbjct:  935 KGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEEIHQHTEQLVQVIYEADQXXXXXXXXXXXXXXXXXXXXXXSEIRGNVLGLSQHKFASNVVEKCVTHSLRAERAMLIDEVCSMADGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHIATLRKYTYGKHILAKLEK 1112
[Close]
BLAST of mRNA_P-wetherbeei_contig13625.1.1 vs. uniprot
Match: A0A1V9YTD6_9STRA (PUM-HD domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTD6_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.050e-25
Identity = 86/176 (48.86%), Postives = 114/176 (64.77%), Query Frame = 0 
Query:   12 VEKLSTHAYGCRVIQRILEHCVDEQKDPVLREINVAFSSLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEERGALIQHLLYAANDGHSLLQVMVCDPYANYVVQKIIDVADETQRETIIDEIRTHAAQLKRYTFGKHIISRLEKISGKKM 187
            V  L+TH YGCRVIQR+LE+C + Q  P+L+EI+     L++DQXXXXXXXXXXXXXXXXXXXXXXX                             +   ++QH++     G   LQVM+ D YANYVVQK+IDVAD  +RE ++  I+T A+ LKR+ FGKHI++RLEK++G+K+
Sbjct:  620 VYSLATHPYGCRVIQRVLENCSEAQMAPILKEIHDCCCLLVEDQXXXXXXXXXXXXXXXXXXXXXXXKVYPDIVRFSYHKFASNVIEKCLMYASVNQLHVIVQHVMEPNEHGECPLQVMMKDQYANYVVQKLIDVADAEEREQMVVIIKTQASHLKRFNFGKHILNRLEKLTGQKI 795
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13625.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYE4_9STRA9.700e-5381.87Armadillo-type protein (Fragment) n=1 Tax=Tribonem... [more]
D7FWZ0_ECTSI1.790e-5080.73PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KS31_9PHAE1.340e-4377.08PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
W7T8B7_9STRA6.950e-3169.32Pumilio RNA-binding repeat containing protein n=1 ... [more]
A0A024UJZ7_9STRA8.360e-3037.43PUM-HD domain-containing protein n=2 Tax=Aphanomyc... [more]
A0A4D9CQB4_9STRA2.530e-2869.32PUM-HD domain-containing protein n=1 Tax=Nannochlo... [more]
A0A6G0XDT3_9STRA2.510e-2645.45PUM-HD domain-containing protein n=2 Tax=Aphanomyc... [more]
A0A067D2Q5_SAPPC3.480e-2650.00PUM-HD domain-containing protein n=3 Tax=Saprolegn... [more]
A0A8C2IKC2_CYPCA1.740e-2551.12Pumilio RNA-binding family member 1 n=2 Tax=Cyprin... [more]
A0A1V9YTD6_9STRA3.050e-2548.86PUM-HD domain-containing protein n=1 Tax=Thraustot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 7..42
e-value: 9.1E-7
score: 38.5
coord: 79..114
e-value: 1.1E-5
score: 35.0
coord: 43..78
e-value: 3.0E-6
score: 36.8
coord: 122..157
e-value: 5.5E-7
score: 39.2
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 132..159
e-value: 5.2E-9
score: 35.6
coord: 85..117
e-value: 5.9E-7
score: 29.1
coord: 12..44
e-value: 8.7E-14
score: 50.9
coord: 50..80
e-value: 2.7E-8
score: 33.4
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 43..78
score: 9.993799
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 7..42
score: 10.297108
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 115..157
score: 9.597166
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 79..114
score: 9.083875
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 4..186
e-value: 3.8E-65
score: 222.1
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 8..183
NoneNo IPR availablePANTHERPTHR12537:SF12MATERNAL PROTEIN PUMILIOcoord: 8..183
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 1..183
score: 59.405087
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 8..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13625contigP-wetherbeei_contig13625:772..1651 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13625.1.1mRNA_P-wetherbeei_contig13625.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13625 772..1651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13625.1.1 ID=prot_P-wetherbeei_contig13625.1.1|Name=mRNA_P-wetherbeei_contig13625.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp
YIHCHVFIKQQVEKLSTHAYGCRVIQRILEHCVDEQKDPVLREINVAFSS
LIQDQYGNYVIQHVLKHGRPPDRLKLMTEVRVNLLPYSQHKFASNVVEKC
LQYGTKEERGALIQHLLYAANDGHSLLQVMVCDPYANYVVQKIIDVADET
QRETIIDEIRTHAAQLKRYTFGKHIISRLEKISGKKM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR033133PUM-HD
IPR016024ARM-type_fold