prot_P-wetherbeei_contig13617.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13617.1.1
Unique Nameprot_P-wetherbeei_contig13617.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length215
Homology
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A1F3YRD6_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YRD6_9PROT)

HSP 1 Score: 259 bits (663), Expect = 3.890e-85
Identity = 137/207 (66.18%), Postives = 160/207 (77.29%), Query Frame = 0
Query:    1 MARTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLRPA 207
            MARTKSSK WLQRHV D YV+KA+A+G RSRAAFKL EIAAR+RL  PG +VVDLGAAPGGWSQ+A  KVGP G V+AVDLLEIAP+S VTVL GDFR+  V+  +   LGG +ADVVLSD+ PN+SGI S DQA AA L  +AI+FCR  LKP G F+VKVFQG+ F  +L  MK  F +V T KP ASR +SRETYL+ RGL+ A
Sbjct:    1 MARTKSSKQWLQRHVKDPYVRKARAEGYRSRAAFKLIEIAARDRLLIPGAKVVDLGAAPGGWSQVAVQKVGPGGKVIAVDLLEIAPISAVTVLVGDFRQPAVQAQLAAALGGQKADVVLSDLSPNISGIASADQARAAELVRMAIEFCRSQLKPSGAFLVKVFQGDEFSGVLREMKRVFRAVRTIKPSASRDQSRETYLLARGLKTA 207          
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: UPI0019AA55ED (RlmE family RNA methyltransferase n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019AA55ED)

HSP 1 Score: 252 bits (643), Expect = 4.410e-82
Identity = 135/208 (64.90%), Postives = 158/208 (75.96%), Query Frame = 0
Query:    1 MARTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLRPAQ 208
            MARTKSS  WLQRHV D +V+KA+++G RSRAA+KL E  ARER   PG RVVDLGAAPGGWSQ+AA KV P G V+AVDLLEIAP+S VT LRGD REA ++  +   +GG +ADVVLSDM PN+SGI S DQA AA L ++A+DFCRE L+ EGVF+VKVFQG  F  LL  +KG F  V T KP ASR ESRETYL+ RGL+  Q
Sbjct:    1 MARTKSSNQWLQRHVKDPFVRKARSEGYRSRAAYKLIEANARERFLVPGARVVDLGAAPGGWSQVAAQKVSPGGKVIAVDLLEIAPISTVTFLRGDCREAAIQAQLAEAMGGSKADVVLSDMSPNISGIASADQARAAELVQMAMDFCRERLQKEGVFLVKVFQGGEFAGLLKELKGMFREVRTIKPAASRGESRETYLLARGLKGIQ 208          
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A521YUR4_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YUR4_9PROT)

HSP 1 Score: 249 bits (636), Expect = 4.040e-81
Identity = 132/201 (65.67%), Postives = 156/201 (77.61%), Query Frame = 0
Query:    5 KSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLR 205
            KSSK WL+RHV D YV+KAK QG RSRAAFKL E+  +E  FRPG+ VVDLGAAPGGWSQ+AAAKV P G V+A+DLL +AP+SGVTVL GDFRE    EM+   L G +ADVVLSD+ PN+SGI +VDQA A  LT  A+DFCR+ LKPEGVF++K F GEAF++LL R+KGTF  V   KP ASR ES ETY++ RGLR
Sbjct:    3 KSSKQWLRRHVTDSYVRKAKEQGYRSRAAFKLLELDEKEHFFRPGMLVVDLGAAPGGWSQVAAAKVRPGGRVIAIDLLPVAPISGVTVLEGDFRE----EMLLRSLEGAKADVVLSDVSPNLSGIGNVDQARALELTLAAVDFCRKALKPEGVFLLKAFHGEAFEELLTRLKGTFRKVKVVKPSASRGESAETYMLARGLR 199          
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A521V9P6_9PROT (Ribosomal RNA large subunit methyltransferase E n=4 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521V9P6_9PROT)

HSP 1 Score: 247 bits (631), Expect = 2.750e-80
Identity = 134/203 (66.01%), Postives = 156/203 (76.85%), Query Frame = 0
Query:    3 RTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLR 205
            RTKSS+ WLQRHV D +V++A+A G RSRAAFKL EI ARERL RPG RVVDLGAAPGGWSQ+AAA+V P G VVAVDLLEIAP+SGV VLRGDF ++ V+  + + LGG +AD+VLSD+ PN+SGI S DQA AA L   AI+FCR  LKP G  + KVFQG  F  +LA +K  F  V TRKP ASR ESRETYL+ RGLR
Sbjct:    2 RTKSSQRWLQRHVADPFVRRARAAGYRSRAAFKLLEIDARERLLRPGARVVDLGAAPGGWSQIAAARVAPGGLVVAVDLLEIAPISGVIVLRGDFCDSGVQAAIASALGGQQADLVLSDLSPNLSGIASADQARAADLLRAAIEFCRRHLKPGGTLLAKVFQGGEFGAVLAALKAAFREVRTRKPAASRGESRETYLLARGLR 204          
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A1F4B6B8_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_19 TaxID=1797491 RepID=A0A1F4B6B8_9PROT)

HSP 1 Score: 247 bits (630), Expect = 4.170e-80
Identity = 133/207 (64.25%), Postives = 156/207 (75.36%), Query Frame = 0
Query:    3 RTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLRPAQA 209
            R++SS+ WLQRHV D +V++A+  G RSRAAFKL EI  RERL RPG RVVDLGAAPGGWSQ+AA +V P G VVAVDLLEIAP+SGVTVLRGDFR+A V+  V   LGG +ADVVLSD+ PN+SGI S DQA AA L   AI+FC   L P G F+ KVFQGE F  +LA ++ +F  V TRKP ASR ESRETYL+ RGL+   A
Sbjct:    2 RSRSSQRWLQRHVTDPFVRRARESGRRSRAAFKLLEIDQRERLLRPGARVVDLGAAPGGWSQVAAERVRPGGVVVAVDLLEIAPISGVTVLRGDFRDAAVQAAVAEALGGSKADVVLSDLSPNLSGIASADQARAAELIHAAIEFCGRCLAPPGAFLAKVFQGEEFGGVLAALRASFREVRTRKPGASRDESRETYLLARGLKSPPA 208          
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A1F4EZY2_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4EZY2_9PROT)

HSP 1 Score: 243 bits (620), Expect = 1.020e-78
Identity = 131/200 (65.50%), Postives = 155/200 (77.50%), Query Frame = 0
Query:    5 KSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGL 204
            KS K WL+RHV+D YV++AK QG RSRAAFKL EI ARE+L RPG+ VVDLGAAPGGWSQ+AAAKV P G V+A+DLL IAP+SGVTVL+GDFRE    E +   L G +ADVVLSD+ PN+SGI +VDQA A  L   AIDFCR+ LKPEGVF++K F GEAF++LLAR++  F  V   KP ASR ES ETY+V RGL
Sbjct:    3 KSDKQWLRRHVSDPYVRQAKKQGYRSRAAFKLLEIDAREKLLRPGMTVVDLGAAPGGWSQVAAAKVRPGGRVIAIDLLPIAPISGVTVLKGDFRE----ETLLGSLEGAKADVVLSDVSPNLSGIGNVDQARALELAGAAIDFCRKALKPEGVFLIKAFHGEAFEELLARLRAAFRKVKIVKPAASRGESAETYVVARGL 198          
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A1F4EU72_9PROT (Ribosomal RNA large subunit methyltransferase E n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4EU72_9PROT)

HSP 1 Score: 243 bits (619), Expect = 1.890e-78
Identity = 133/204 (65.20%), Postives = 151/204 (74.02%), Query Frame = 0
Query:    1 MARTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGL 204
            M R+KSS+ WLQRHV D +V++A+  G RSRAAFKL EI  RERL R G +VVDLGAAPGGWSQ+AA +V P G V+AVDLLEIAP+SGVTVLRGDF  A V E V   LGG +ADVVLSD+ PN+SGI S DQA AA L   AI FCR  LKP G F+ KVFQGE F  +L  +K  F  V TRKP ASR ESRETYL+ RGL
Sbjct:    1 MVRSKSSRRWLQRHVADPFVRRAREAGYRSRAAFKLLEIDDRERLLRQGAKVVDLGAAPGGWSQVAAERVKPGGRVIAVDLLEIAPISGVTVLRGDFCAAAVEEAVVAALGGGKADVVLSDLSPNLSGIASADQARAAVLLRGAIAFCRRQLKPGGAFLAKVFQGEEFASVLTALKAVFREVRTRKPAASRGESRETYLLARGL 204          
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A537E9A6_9PROT (Ribosomal RNA large subunit methyltransferase E n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537E9A6_9PROT)

HSP 1 Score: 237 bits (605), Expect = 1.820e-76
Identity = 127/200 (63.50%), Postives = 153/200 (76.50%), Query Frame = 0
Query:    5 KSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGL 204
            KSSK WL+RHV D YV+KA+ QG RSR+AFKL EI  +E+L RPG  VVDLGAAPGGWSQ+AAA+V P G V+A+DLL+IAP++GV V+ GDFR A+        L GVRAD+VLSD+ PN+SG+ +VDQA AA L   AIDFCR+ LKP+GVFVVK F GEAF ++LAR+K  F  V  RKP ASR ES ETY+V RGL
Sbjct:    3 KSSKQWLRRHVTDPYVRKAREQGYRSRSAFKLLEIDDKEKLLRPGAIVVDLGAAPGGWSQVAAARVKPGGRVIAIDLLKIAPITGVEVVAGDFRAAR--------LEGVRADIVLSDLAPNLSGVANVDQARAAGLAFAAIDFCRKTLKPDGVFVVKTFHGEAFGEVLARLKREFRKVTVRKPSASRGESSETYVVARGL 194          
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A536WT49_9PROT (Ribosomal RNA large subunit methyltransferase E n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WT49_9PROT)

HSP 1 Score: 237 bits (605), Expect = 2.080e-76
Identity = 124/201 (61.69%), Postives = 155/201 (77.11%), Query Frame = 0
Query:    5 KSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLR 205
            KS+K WL+RHV D YV+KA+ QG RSRAA+KL E+  RE++FRPG  VVDLGAAPG WSQ+AA KV P G V+AVDLL+IAP+SGVTV++GDFR+A++ E     LGG +ADV+LSD+  N+SGI +VDQA AAAL   A+D CR+ LK +GVFV+K F GEAF ++L R+K  F  V+ RKP ASR ESRETY+V R  R
Sbjct:    3 KSNKQWLRRHVTDPYVRKAREQGYRSRAAYKLIELNEREKIFRPGAMVVDLGAAPGSWSQVAAQKVSPGGKVIAVDLLDIAPISGVTVIQGDFRDAKLIE----ALGGAKADVILSDVASNLSGIANVDQARAAALAHAAMDMCRKALKGDGVFVLKAFHGEAFDEVLQRLKREFGKVSVRKPGASRGESRETYVVARSFR 199          
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Match: A0A6L5JX67_RHOTE (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Rhodocyclus tenuis TaxID=1066 RepID=A0A6L5JX67_RHOTE)

HSP 1 Score: 236 bits (602), Expect = 6.990e-76
Identity = 122/206 (59.22%), Postives = 155/206 (75.24%), Query Frame = 0
Query:    1 MARTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGVRVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREAQVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCREVLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLVGRGLRP 206
            MART++SKAW++ HVND +VQKAKA G RSRAA+KL EI  R+ L RPG  VVDLGAAPGGWSQ+AA ++  +G V A+DLLEI P++GV+ L+GDFRE ++ + + T L G R  +VLSDM PN+SGI   DQA A  L ELA++F    LKP+G F+VKVF G  +++ + RM+ TF SV TRKPEASR  S ETYL+GRGL+P
Sbjct:    1 MARTRTSKAWMREHVNDTFVQKAKADGYRSRAAYKLMEIDDRDHLIRPGDCVVDLGAAPGGWSQVAAQRMQRRGKVFALDLLEIVPLAGVSFLQGDFRETEILQQLETMLDGERVGLVLSDMAPNISGIAISDQARAMHLAELALEFAEAWLKPDGAFLVKVFHGHGYEEYVRRMRSTFLSVTTRKPEASRDRSSETYLLGRGLKP 206          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13617.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F3YRD6_9PROT3.890e-8566.18Ribosomal RNA large subunit methyltransferase E n=... [more]
UPI0019AA55ED4.410e-8264.90RlmE family RNA methyltransferase n=1 Tax=Candidat... [more]
A0A521YUR4_9PROT4.040e-8165.67Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A521V9P6_9PROT2.750e-8066.01Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A1F4B6B8_9PROT4.170e-8064.25Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A1F4EZY2_9PROT1.020e-7865.50Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A1F4EU72_9PROT1.890e-7865.20Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A537E9A6_9PROT1.820e-7663.50Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A536WT49_9PROT2.080e-7661.69Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A6L5JX67_RHOTE6.990e-7659.22Ribosomal RNA large subunit methyltransferase E n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 27..206
e-value: 3.4E-57
score: 195.1
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilySUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 28..205
IPR015507Ribosomal RNA large subunit methyltransferase EPIRSFPIRSF00546123S_rRNA_mtasecoord: 1..214
e-value: 2.9E-74
score: 247.2
IPR015507Ribosomal RNA large subunit methyltransferase EHAMAPMF_01547RNA_methyltr_Ecoord: 12..205
score: 29.392097
IPR002877Ribosomal RNA methyltransferase, FtsJ domainPFAMPF01728FtsJcoord: 28..203
e-value: 4.1E-55
score: 186.6
NoneNo IPR availablePIRSRPIRSR005461-1PIRSR005461-1coord: 5..205
e-value: 3.5E-71
score: 236.9
NoneNo IPR availablePIRSRPIRSR028774-2PIRSR028774-2coord: 30..64
e-value: 7.7E-4
score: 16.7
NoneNo IPR availablePANTHERPTHR10920RIBOSOMAL RNA METHYLTRANSFERASEcoord: 13..208
NoneNo IPR availableCDDcd02440AdoMet_MTasescoord: 51..163
e-value: 8.81423E-7
score: 43.9579

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13617contigP-wetherbeei_contig13617:722..1366 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13617.1.1mRNA_P-wetherbeei_contig13617.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13617 722..1366 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13617.1.1 ID=prot_P-wetherbeei_contig13617.1.1|Name=mRNA_P-wetherbeei_contig13617.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=215bp
MARTKSSKAWLQRHVNDQYVQKAKAQGLRSRAAFKLDEIAARERLFRPGV
RVVDLGAAPGGWSQLAAAKVGPKGAVVAVDLLEIAPMSGVTVLRGDFREA
QVREMVRTGLGGVRADVVLSDMLPNVSGIPSVDQANAAALTELAIDFCRE
VLKPEGVFVVKVFQGEAFQDLLARMKGTFASVATRKPEASRVESRETYLV
GRGLRPAQAAQDSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases_sf
IPR015507rRNA-MeTfrase_E
IPR002877RNA_MeTrfase_FtsJ_dom