prot_P-wetherbeei_contig13616.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig13616.1.1
Unique Name	prot_P-wetherbeei_contig13616.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	260

Homology

[Close]

BLAST of mRNA_P-wetherbeei_contig13616.1.1 vs. uniprot
Match: A0A835YUV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.110e-25
Identity = 87/254 (34.25%), Postives = 120/254 (47.24%), Query Frame = 0

Query:    1 MGRVRRYRRIKAIDPFSKRGKGGLGDGVEHELPPDRPNHIAQRFNEDGTRKRKKRPPLPLWIREELKNTAKDD---DGEAELAIDPSRKKAEEGPPRMK--PRGADESLKQFNQRIKRETAQMLIDEAKASSATXXXXXXXXXXXXXXXXXXXXXRIDEAQSDMRRKRSARGSGGDMEENNDGSDAEGRPRVRHXXXXXXXXXDDDAFPAPERIAFGEVVHEPPRFTVKPKLRGMAAAVASRGDGPAAQKPWVK 249
            MGRVRRY++ K +D  SKR +    D VEH LPPD  NH AQR   DGT KR+ +  LP W +EEL+ TAK +   D +       +    E   P++K  P+  DESL++FN+R+++  A+ L D AK +S+T                              RRK+         +    G   E + +V           D   F  PE I FGE VHEPPRF   PKL+G+   +A        +KPW++
Sbjct:    1 MGRVRRYKKAKNLDITSKRKRADKKD-VEHNLPPDTANHQAQRLKADGTLKRRAKQRLPEWAKEELRETAKREREADKQLLAGAAATPLPGENDTPKVKITPKRTDESLREFNERVRKVAAEALKDNAKRASSTV----------------------------ARRKKHLAEKSQKKKLQRQGLWEEHKMQVAREEQGIAEERD---FSKPEHIQFGETVHEPPRFQSMPKLKGLKPDLA--------EKPWLR 214

[Close]

BLAST of mRNA_P-wetherbeei_contig13616.1.1 vs. uniprot
Match: D7G2K9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2K9_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 6.940e-19
Identity = 64/141 (45.39%), Postives = 85/141 (60.28%), Query Frame = 0

Query:    1 MGRVRRYRRIKAIDPFSKRGKGGL-------GDGVEHELPPDRPNHIAQRFN--EDGTRKRKK-RPPLPLWIREELKNTAKDDDGEAELAIDPSRKKAEEGPPR--MKPRGADESLKQFNQRIKRETAQMLIDEAKASSAT 129
            MGRVR+Y+++KA+DPF+K G GG        G  ++  LPPD  NH AQR N  E+G  K+KK +  LP W  EELK TAK      E   DP  K  +  P R  M+ +  DES++QFN+R++  TAQ+L DE K  S+T
Sbjct:    1 MGRVRKYKKVKAMDPFAKGGCGGRMGMGRKGGSDLDRNLPPDVKNHQAQRLNNLEEGKDKKKKNKRRLPQWAHEELKETAK---RVREEHADPGGKGRQPEPQRAAMEGKREDESMRQFNKRVREGTAQLLKDEFKEHSST 138

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig13616.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig13616.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YUV8_9STRA	2.110e-25	34.25	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D7G2K9_ECTSI	6.940e-19	45.39	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 138..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..170

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig13616	contig	P-wetherbeei_contig13616:368..1565 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig13616.1.1	mRNA_P-wetherbeei_contig13616.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig13616 260..1565 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig13616.1.1 ID=prot_P-wetherbeei_contig13616.1.1|Name=mRNA_P-wetherbeei_contig13616.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=260bp
MGRVRRYRRIKAIDPFSKRGKGGLGDGVEHELPPDRPNHIAQRFNEDGTR
KRKKRPPLPLWIREELKNTAKDDDGEAELAIDPSRKKAEEGPPRMKPRGA
DESLKQFNQRIKRETAQMLIDEAKASSATVKKKKLYLQEKKKQKKLKKQQ
RIDEAQSDMRRKRSARGSGGDMEENNDGSDAEGRPRVRHRRRDGDGGGDD
DAFPAPERIAFGEVVHEPPRFTVKPKLRGMAAAVASRGDGPAAQKPWVKH
KLRVPDQDEG