prot_P-wetherbeei_contig13612.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig13612.3.1
Unique Name	prot_P-wetherbeei_contig13612.3.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	115

Homology

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BLAST of mRNA_P-wetherbeei_contig13612.3.1 vs. uniprot
Match: UPI0019C343FC (Acyl-CoA dehydrogenase n=2 Tax=Bacteria TaxID=2 RepID=UPI0019C343FC)

HSP 1 Score: 213 bits (541), Expect = 4.430e-69
Identity = 105/114 (92.11%), Postives = 112/114 (98.25%), Query Frame = 0

Query:    1 FGRPLAANQLIQKKLADMLTEISIGLQSCLRLGRMKDEGSAAVEITSILKRNSCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAITGIQAFS 114
            FGRPLAANQLIQKKLADM TEI++GLQ CLRLGRMKD+G+A+VEITSILKRNSCGKSLDIAR+ARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRA+TGIQAFS
Sbjct:   39 FGRPLAANQLIQKKLADMETEITLGLQGCLRLGRMKDDGTASVEITSILKRNSCGKSLDIARLARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAMTGIQAFS 152

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BLAST of mRNA_P-wetherbeei_contig13612.3.1 vs. uniprot
Match: UPI001BC80950 (Acyl-CoA dehydrogenase family protein n=2 Tax=Comamonadaceae TaxID=80864 RepID=UPI001BC80950)

HSP 1 Score: 216 bits (550), Expect = 5.960e-69
Identity = 107/114 (93.86%), Postives = 112/114 (98.25%), Query Frame = 0

Query:    1 FGRPLAANQLIQKKLADMLTEISIGLQSCLRLGRMKDEGSAAVEITSILKRNSCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAITGIQAFS 114
            FGRPLAANQLIQKKLADMLTEIS+GLQ CLRLGRMKDEG+AAVEITSILKRNSCGK+LDIAR+ARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHD+HALILGRAITGI AFS
Sbjct:  145 FGRPLAANQLIQKKLADMLTEISLGLQGCLRLGRMKDEGTAAVEITSILKRNSCGKALDIARLARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHALILGRAITGIAAFS 258

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BLAST of mRNA_P-wetherbeei_contig13612.3.1 vs. uniprot
Match: A0A1V6FV47_9PROT (Acyl-CoA dehydrogenase, short-chain specific n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A1V6FV47_9PROT)

HSP 1 Score: 214 bits (544), Expect = 2.360e-68
Identity = 105/114 (92.11%), Postives = 112/114 (98.25%), Query Frame = 0

Query:    1 FGRPLAANQLIQKKLADMLTEISIGLQSCLRLGRMKDEGSAAVEITSILKRNSCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAITGIQAFS 114
            FGRPLAANQLIQKKLADMLTEI++GLQ CLRLGRMKDEG+AAVEITSILKRNSCGK+LDIAR+ARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHD+HALILGRAITGI AF+
Sbjct:  123 FGRPLAANQLIQKKLADMLTEITLGLQGCLRLGRMKDEGTAAVEITSILKRNSCGKALDIARLARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHALILGRAITGIAAFN 236

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BLAST of mRNA_P-wetherbeei_contig13612.3.1 vs. uniprot
Match: A0A1E4IMG7_9BURK (Acyl-CoA dehydrogenase n=1 Tax=Rubrivivax sp. SCN 71-131 TaxID=1660138 RepID=A0A1E4IMG7_9BURK)

HSP 1 Score: 218 bits (554), Expect = 8.070e-68
Identity = 108/114 (94.74%), Postives = 112/114 (98.25%), Query Frame = 0

Query:    1 FGRPLAANQLIQKKLADMLTEISIGLQSCLRLGRMKDEGSAAVEITSILKRNSCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAITGIQAFS 114
            FGRPLAANQLIQKKLADMLTEI++GLQ CLRLGRMKDEGSAAVEITSI+KRNSCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHD+HALILGRAITGI AFS
Sbjct:  283 FGRPLAANQLIQKKLADMLTEITLGLQGCLRLGRMKDEGSAAVEITSIMKRNSCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHALILGRAITGIAAFS 396

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BLAST of mRNA_P-wetherbeei_contig13612.3.1 vs. uniprot
Match: A0A3M5ESU2_PSEAI (Acyl-CoA_dh_1 domain-containing protein n=5 Tax=Proteobacteria TaxID=1224 RepID=A0A3M5ESU2_PSEAI)

HSP 1 Score: 206 bits (524), Expect = 6.070e-67
Identity = 100/113 (88.50%), Postives = 109/113 (96.46%), Query Frame = 0

Query:    1 FGRPLAANQLIQKKLADMLTEISIGLQSCLRLGRMKDEGSAAVEITSILKRNSCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAITGIQAF 113
            FGRPLAANQLIQKKLADM TEI++ LQ CLRLGRMKDEG+AAVEITSI+KRNSCGK+LDIAR+ARDM+GGNGISDEFG+ARHLVNLEVVNTYEGTHD+HALILGRA TGIQAF
Sbjct:    7 FGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGIARHLVNLEVVNTYEGTHDVHALILGRAQTGIQAF 119

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BLAST of mRNA_P-wetherbeei_contig13612.3.1 vs. uniprot
Match: A0A3B8PFG8_9GAMM (Acyl-CoA dehydrogenase (Fragment) n=2 Tax=Oceanospirillales TaxID=135619 RepID=A0A3B8PFG8_9GAMM)

HSP 1 Score: 206 bits (525), Expect = 6.740e-67
Identity = 100/114 (87.72%), Postives = 110/114 (96.49%), Query Frame = 0

Query:    1 FGRPLAANQLIQKKLADMLTEISIGLQSCLRLGRMKDEGSAAVEITSILKRNSCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAITGIQAFS 114
            FGRPLAANQLIQKKLADM TEI++GLQ CLRLGRMKDEG+AAVEITSI+KRNSCGK+LDIAR+ARDM+GGNGISDEFGV RHLVNLEVVNTYEGTHD+HALILGRA TG+QAF+
Sbjct:   19 FGRPLAANQLIQKKLADMQTEITLGLQGCLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVIRHLVNLEVVNTYEGTHDVHALILGRAQTGLQAFT 132

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BLAST of mRNA_P-wetherbeei_contig13612.3.1 vs. uniprot
Match: A0A4P6X0G8_HYDPS (Acyl-CoA dehydrogenase n=25 Tax=Betaproteobacteria TaxID=28216 RepID=A0A4P6X0G8_HYDPS)

HSP 1 Score: 215 bits (547), Expect = 8.650e-67
Identity = 106/114 (92.98%), Postives = 112/114 (98.25%), Query Frame = 0

Query:    1 FGRPLAANQLIQKKLADMLTEISIGLQSCLRLGRMKDEGSAAVEITSILKRNSCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAITGIQAFS 114
            FGRPLAANQLIQKKLADMLTEIS+GLQ CLRLGRMKDEG+AAVEITSILKRNSCGK+LDIARMARDMMGGNGISDE+GVARHLVNLEVVNTYEGTHD+HALILGRAITGI AF+
Sbjct:  281 FGRPLAANQLIQKKLADMLTEISLGLQGCLRLGRMKDEGTAAVEITSILKRNSCGKALDIARMARDMMGGNGISDEYGVARHLVNLEVVNTYEGTHDVHALILGRAITGIAAFA 394

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BLAST of mRNA_P-wetherbeei_contig13612.3.1 vs. uniprot
Match: A0A1L1PDL4_HYDIT (Glutaryl-CoA dehydrogenase n=16 Tax=Burkholderiales TaxID=80840 RepID=A0A1L1PDL4_HYDIT)

HSP 1 Score: 215 bits (547), Expect = 9.120e-67
Identity = 106/114 (92.98%), Postives = 112/114 (98.25%), Query Frame = 0

Query:    1 FGRPLAANQLIQKKLADMLTEISIGLQSCLRLGRMKDEGSAAVEITSILKRNSCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAITGIQAFS 114
            FGRPLAANQLIQKKLADMLTEIS+GLQ CLRLGRMKDEG+AAVEITSILKRNSCGK+LDIAR+ARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHD+HALILGRAITGI AF+
Sbjct:  284 FGRPLAANQLIQKKLADMLTEISLGLQGCLRLGRMKDEGTAAVEITSILKRNSCGKALDIARLARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDVHALILGRAITGIAAFN 397

[Close]

BLAST of mRNA_P-wetherbeei_contig13612.3.1 vs. uniprot
Match: A0A2N1WEA9_9GAMM (Acyl-CoA dehydrogenase (Fragment) n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2N1WEA9_9GAMM)

HSP 1 Score: 208 bits (530), Expect = 1.000e-66
Identity = 102/113 (90.27%), Postives = 109/113 (96.46%), Query Frame = 0

Query:    1 FGRPLAANQLIQKKLADMLTEISIGLQSCLRLGRMKDEGSAAVEITSILKRNSCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAITGIQAF 113
            FGRPLAANQLIQKKLADM TEI++ LQ CLRLGRMKDEGSAAVEITSI+KRNSCGK+LD+ARMARDM+GGNGISDEFGVARHLVNLEVVNTYEGTHD+HALILGRA TGIQAF
Sbjct:   87 FGRPLAANQLIQKKLADMQTEITLALQGCLRLGRMKDEGSAAVEITSIMKRNSCGKALDVARMARDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDVHALILGRAQTGIQAF 199

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BLAST of mRNA_P-wetherbeei_contig13612.3.1 vs. uniprot
Match: A0A7W2ETW3_9BURK (Acyl-CoA dehydrogenase n=3 Tax=unclassified Duganella TaxID=2636909 RepID=A0A7W2ETW3_9BURK)

HSP 1 Score: 214 bits (546), Expect = 1.130e-66
Identity = 104/114 (91.23%), Postives = 112/114 (98.25%), Query Frame = 0

Query:    1 FGRPLAANQLIQKKLADMLTEISIGLQSCLRLGRMKDEGSAAVEITSILKRNSCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAITGIQAFS 114
            FGRPLAANQL+QKKLADMLTEI++GLQSCLRLGRMKDEG+AAVE+TSI+KRNSCGKSLDIARMARDMMGGNGISDEFGV RHLVNLEVVNTYEGTHD+HALILGRAITG+ AFS
Sbjct:  279 FGRPLAANQLVQKKLADMLTEITLGLQSCLRLGRMKDEGTAAVELTSIMKRNSCGKSLDIARMARDMMGGNGISDEFGVVRHLVNLEVVNTYEGTHDVHALILGRAITGLAAFS 392

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig13612.3.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig13612.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI0019C343FC	4.430e-69	92.11	Acyl-CoA dehydrogenase n=2 Tax=Bacteria TaxID=2 Re...	[more]
UPI001BC80950	5.960e-69	93.86	Acyl-CoA dehydrogenase family protein n=2 Tax=Coma...	[more]
A0A1V6FV47_9PROT	2.360e-68	92.11	Acyl-CoA dehydrogenase, short-chain specific n=2 T...	[more]
A0A1E4IMG7_9BURK	8.070e-68	94.74	Acyl-CoA dehydrogenase n=1 Tax=Rubrivivax sp. SCN ...	[more]
A0A3M5ESU2_PSEAI	6.070e-67	88.50	Acyl-CoA_dh_1 domain-containing protein n=5 Tax=Pr...	[more]
A0A3B8PFG8_9GAMM	6.740e-67	87.72	Acyl-CoA dehydrogenase (Fragment) n=2 Tax=Oceanosp...	[more]
A0A4P6X0G8_HYDPS	8.650e-67	92.98	Acyl-CoA dehydrogenase n=25 Tax=Betaproteobacteria...	[more]
A0A1L1PDL4_HYDIT	9.120e-67	92.98	Glutaryl-CoA dehydrogenase n=16 Tax=Burkholderiale...	[more]
A0A2N1WEA9_9GAMM	1.000e-66	90.27	Acyl-CoA dehydrogenase (Fragment) n=2 Tax=Proteoba...	[more]
A0A7W2ETW3_9BURK	1.130e-66	91.23	Acyl-CoA dehydrogenase n=3 Tax=unclassified Dugane...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009075	Acyl-CoA dehydrogenase/oxidase C-terminal	PFAM	PF00441	Acyl-CoA_dh_1	coord: 1..107 e-value: 1.5E-17 score: 64.2
None	No IPR available	GENE3D	1.20.140.10		coord: 1..114 e-value: 5.4E-32 score: 112.8
None	No IPR available	PIRSR	PIRSR634178-1	PIRSR634178-1	coord: 1..107 e-value: 2.7E-9 score: 34.0
None	No IPR available	PIRSR	PIRSR634180-1	PIRSR634180-1	coord: 1..107 e-value: 3.9E-9 score: 33.4
None	No IPR available	PIRSR	PIRSR634183-3	PIRSR634183-3	coord: 1..107 e-value: 4.2E-11 score: 40.2
None	No IPR available	PANTHER	PTHR42807	GLUTARYL-COA DEHYDROGENASE, MITOCHONDRIAL	coord: 1..113
IPR006089	Acyl-CoA dehydrogenase, conserved site	PROSITE	PS00073	ACYL_COA_DH_2	coord: 66..85
IPR036250	Acyl-CoA dehydrogenase-like, C-terminal	SUPERFAMILY	47203	Acyl-CoA dehydrogenase C-terminal domain-like	coord: 1..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig13612	contig	P-wetherbeei_contig13612:1474..1818 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig13612.3.1	mRNA_P-wetherbeei_contig13612.3.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig13612 1474..1818 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig13612.3.1 ID=prot_P-wetherbeei_contig13612.3.1|Name=mRNA_P-wetherbeei_contig13612.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp
FGRPLAANQLIQKKLADMLTEISIGLQSCLRLGRMKDEGSAAVEITSILK
RNSCGKSLDIARMARDMMGGNGISDEFGVARHLVNLEVVNTYEGTHDIHA
LILGRAITGIQAFS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009075	AcylCo_DH/oxidase_C
IPR006089	Acyl-CoA_DH_CS
IPR036250	AcylCo_DH-like_C