prot_P-wetherbeei_contig13601.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13601.1.1
Unique Nameprot_P-wetherbeei_contig13601.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length367
Homology
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BLAST of mRNA_P-wetherbeei_contig13601.1.1 vs. uniprot
Match: A0A662XI34_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XI34_9STRA)

HSP 1 Score: 141 bits (356), Expect = 9.610e-35
Identity = 57/92 (61.96%), Postives = 73/92 (79.35%), Query Frame = 0 
Query:    1 MKDLMAFRGHNKEVTAISWHPTIERLFASGGFDGTLAYWAVGHETALAMVPRAHDLTAIWDMAWHPLGHVLATGSNDHTVKFWARTRPGDPL 92
            +K+    +GH +EVT+I+WHP  ERLF SG +DG+L YW VG E ALA +P+AHD TA+WD+ WHP+GHV+ATGSNDH+ KFW R RPGDP+
Sbjct:   34 LKEFATLKGHAREVTSIAWHPWYERLFVSGSYDGSLMYWEVGKENALASIPQAHD-TAVWDIQWHPVGHVVATGSNDHSTKFWCRNRPGDPM 124
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BLAST of mRNA_P-wetherbeei_contig13601.1.1 vs. uniprot
Match: A0A836CIR2_9STRA (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIR2_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.420e-33
Identity = 59/85 (69.41%), Postives = 69/85 (81.18%), Query Frame = 0 
Query:   20 HPTIERLFASGGFDGTLAYWAVGHETALAMVPRAHDLTAIWDMAWHPLGHVLATGSNDHTVKFWARTRPGDPLGAHPVLTADGQP 104
            HP +E LF SGGFDGTL YW VG+E   A++P+AHD TA+WD++WHPLGHV+ATGSNDHTVKFWAR RPGDPLG  P +  DG P
Sbjct:  301 HPQMETLFLSGGFDGTLIYWMVGNEQPEAVIPQAHDDTAVWDISWHPLGHVVATGSNDHTVKFWARNRPGDPLGVEPEVDLDGNP 385
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BLAST of mRNA_P-wetherbeei_contig13601.1.1 vs. uniprot
Match: A0A6A1WI22_9ROSI (Flowering time control protein FY (Fragment) n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1WI22_9ROSI)

HSP 1 Score: 133 bits (335), Expect = 1.010e-31
Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = 0 
Query:    1 MKDLMAFRGHNKEVTAISWHPTIERLFASGGFDGTLAYWAVGHETALAMVPRAHDLTAIWDMAWHPLGHVLATGSNDHTVKFWARTRPGD 90
            MK+L +FRGH K+VTA++WHP  E  F SG FDG++ +W VGH+T    +P AHD  A+WD+AWHP+G++L +GSNDHT KFW R RPGD
Sbjct:   68 MKELESFRGHRKDVTALAWHPFHEEYFVSGSFDGSIFHWLVGHDTPQVEIPNAHD-NAVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGD 156
[Close]
BLAST of mRNA_P-wetherbeei_contig13601.1.1 vs. uniprot
Match: A0A7R8WX42_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WX42_9CRUS)

HSP 1 Score: 129 bits (324), Expect = 1.760e-31
Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0 
Query:    3 DLMAFRGHNKEVTAISWHPTIERLFASGGFDGTLAYWAVGHETALAMVPRAHDLTAIWDMAWHPLGHVLATGSNDHTVKFWARTRPGDPL 92
            +L  FRGH KE + ++WHP  E LFASGG DG+L YW VG +T L  +  AH+ + +W +AWHPLGHVL+TGSNDHT +FW R RPGDP+
Sbjct:  115 ELQVFRGHKKEASCVAWHPVHEGLFASGGSDGSLMYWHVGCQTELGSIEAAHE-SIVWCLAWHPLGHVLSTGSNDHTTRFWTRNRPGDPM 203
[Close]
BLAST of mRNA_P-wetherbeei_contig13601.1.1 vs. uniprot
Match: A0A7S1UN25_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UN25_9STRA)

HSP 1 Score: 124 bits (312), Expect = 5.360e-31
Identity = 57/94 (60.64%), Postives = 70/94 (74.47%), Query Frame = 0 
Query:    1 MKDLMAFRGHNKEVTAISWHPTIERLFASGGFDGTLAYWAVGHETAL-----AMVPRAHDLTAIWDMAWHPLGHVLATGSNDHTVKFWARTRPG 89
            M++L + +GHNKEVT+I+WHP  E +FASGG DGTL YW VG + ++     A VP AHD+ AIWD+AWHP GH+LATGSND   KFWAR R G
Sbjct:   38 MRELCSLKGHNKEVTSIAWHPHYESVFASGGMDGTLLYWNVGAKGSMNNEPAAKVPFAHDM-AIWDLAWHPCGHMLATGSNDRQTKFWARNRFG 130
[Close]
BLAST of mRNA_P-wetherbeei_contig13601.1.1 vs. uniprot
Match: A0A8B7ZV24_ACAPL (pre-mRNA 3' end processing protein WDR33-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZV24_ACAPL)

HSP 1 Score: 133 bits (334), Expect = 2.250e-30
Identity = 56/90 (62.22%), Postives = 68/90 (75.56%), Query Frame = 0 
Query:    1 MKDLMAFRGHNKEVTAISWHPTIERLFASGGFDGTLAYWAVGHETALAMVPRAHDLTAIWDMAWHPLGHVLATGSNDHTVKFWARTRPGD 90
            MK++  FRGH KE TAISWHP  E +FASGG DG+L +W VG+E  +A V  AHD + +W +AWHPLGH+LA+ SNDHT KFW R RPGD
Sbjct:  332 MKEMYTFRGHKKEATAISWHPIHETMFASGGSDGSLLFWEVGNEKEVASVETAHD-SIVWSLAWHPLGHILASASNDHTTKFWTRNRPGD 420
[Close]
BLAST of mRNA_P-wetherbeei_contig13601.1.1 vs. uniprot
Match: A0A8J5GLQ8_ZINOF (Uncharacterized protein n=4 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GLQ8_ZINOF)

HSP 1 Score: 132 bits (333), Expect = 2.480e-30
Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = 0 
Query:    1 MKDLMAFRGHNKEVTAISWHPTIERLFASGGFDGTLAYWAVGHETALAMVPRAHDLTAIWDMAWHPLGHVLATGSNDHTVKFWARTRPGD 90
            MK+L +FRGH+K+VTA+ WHP  E  F SG FDG++ +W VGHET    +P AHD  ++WD+AWHP+G++L +GSNDHT KFW R RPGD
Sbjct:  389 MKELESFRGHSKDVTALEWHPFHEEYFTSGSFDGSIFHWLVGHETPQVEIPGAHD-NSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGD 477
[Close]
BLAST of mRNA_P-wetherbeei_contig13601.1.1 vs. uniprot
Match: UPI0014553EB4 (pre-mRNA 3' end processing protein WDR33-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014553EB4)

HSP 1 Score: 132 bits (333), Expect = 2.930e-30
Identity = 56/90 (62.22%), Postives = 68/90 (75.56%), Query Frame = 0 
Query:    1 MKDLMAFRGHNKEVTAISWHPTIERLFASGGFDGTLAYWAVGHETALAMVPRAHDLTAIWDMAWHPLGHVLATGSNDHTVKFWARTRPGD 90
            MK+L  FRGH KE TAI+WHP  E +FASGG DG+L +W VG+E  +A V  AHD + +W +AWHPLGH+LA+ SNDHT KFW R RPGD
Sbjct:  332 MKELYTFRGHKKEATAIAWHPIHESMFASGGSDGSLLFWQVGNEKEVASVETAHD-SIVWSLAWHPLGHILASASNDHTTKFWTRNRPGD 420
[Close]
BLAST of mRNA_P-wetherbeei_contig13601.1.1 vs. uniprot
Match: A0A833RJ71_9POAL (Flowering time control protein FY isoform X1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833RJ71_9POAL)

HSP 1 Score: 131 bits (330), Expect = 5.360e-30
Identity = 54/90 (60.00%), Postives = 69/90 (76.67%), Query Frame = 0 
Query:    1 MKDLMAFRGHNKEVTAISWHPTIERLFASGGFDGTLAYWAVGHETALAMVPRAHDLTAIWDMAWHPLGHVLATGSNDHTVKFWARTRPGD 90
            MK+L +FRGH+K+VTA++WHP  E  F SG FDG + +W VGHET  A +  AHD   +WD+AWHP+G++LA+GSNDHT KFW R RPGD
Sbjct:  336 MKELESFRGHSKDVTALAWHPFHEEYFVSGSFDGAIFHWLVGHETPQAEILGAHD-NCVWDLAWHPIGYLLASGSNDHTTKFWCRNRPGD 424
[Close]
BLAST of mRNA_P-wetherbeei_contig13601.1.1 vs. uniprot
Match: A0A098VU22_9MICR (Polyadenylation factor subunit 2 n=1 Tax=Mitosporidium daphniae TaxID=1485682 RepID=A0A098VU22_9MICR)

HSP 1 Score: 128 bits (321), Expect = 6.320e-30
Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 0 
Query:    1 MKDLMAFRGHNKEVTAISWHPTIERLFASGGFDGTLAYWAVGHETALAMVPRAHDLTAIWDMAWHPLGHVLATGSNDHTVKFWARTRPGD 90
            +++L  F+GH K++T++SWHP  E  FASGGFDG+L +W +G E+ + ++  AH+  AIW M WHPLGH+L TGSNDHT KFW R RPG+
Sbjct:  289 LEELQTFKGHKKDITSLSWHPFQESFFASGGFDGSLMFWNIGTESNVGLIDNAHE-QAIWSMDWHPLGHILTTGSNDHTTKFWTRNRPGE 377
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13601.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A662XI34_9STRA9.610e-3561.96Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A836CIR2_9STRA1.420e-3369.41WD40-repeat-containing domain protein (Fragment) n... [more]
A0A6A1WI22_9ROSI1.010e-3158.89Flowering time control protein FY (Fragment) n=1 T... [more]
A0A7R8WX42_9CRUS1.760e-3158.89Hypothetical protein (Fragment) n=1 Tax=Cyprideis ... [more]
A0A7S1UN25_9STRA5.360e-3160.64Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A8B7ZV24_ACAPL2.250e-3062.22pre-mRNA 3' end processing protein WDR33-like n=1 ... [more]
A0A8J5GLQ8_ZINOF2.480e-3058.89Uncharacterized protein n=4 Tax=Zingiber officinal... [more]
UPI0014553EB42.930e-3062.22pre-mRNA 3' end processing protein WDR33-like n=1 ... [more]
A0A833RJ71_9POAL5.360e-3060.00Flowering time control protein FY isoform X1 n=1 T... [more]
A0A098VU22_9MICR6.320e-3055.56Polyadenylation factor subunit 2 n=1 Tax=Mitospori... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 315..331
e-value: 6.7E-4
score: 29.0
coord: 276..292
e-value: 0.029
score: 20.7
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 316..331
score: 10.213134
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 277..291
score: 9.537339
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 44..84
e-value: 2.1E-5
score: 34.0
coord: 1..40
e-value: 0.014
score: 24.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 4..39
e-value: 0.024
score: 15.5
coord: 51..83
e-value: 2.9E-5
score: 24.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 59..83
score: 9.773251
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 7..49
score: 12.513543
NoneNo IPR availableGENE3D4.10.60.10coord: 270..303
e-value: 1.7E-6
score: 30.2
coord: 309..350
e-value: 7.9E-8
score: 34.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..366
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 7..39
score: 10.363778
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..144
e-value: 6.2E-20
score: 73.4
IPR025829Zinc knuckle CX2CX3GHX4CPFAMPF13696zf-CCHC_2coord: 311..330
e-value: 1.9E-8
score: 34.0
coord: 272..291
e-value: 4.5E-11
score: 42.4
IPR045245Pre-mRNA 3' end processing protein Pfs2-likePANTHERPTHR22836WD40 REPEAT PROTEINcoord: 1..158
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..115
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 268..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13601contigP-wetherbeei_contig13601:413..1642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13601.1.1mRNA_P-wetherbeei_contig13601.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13601 62..1819 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13601.1.1 ID=prot_P-wetherbeei_contig13601.1.1|Name=mRNA_P-wetherbeei_contig13601.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=367bp
MKDLMAFRGHNKEVTAISWHPTIERLFASGGFDGTLAYWAVGHETALAMV
PRAHDLTAIWDMAWHPLGHVLATGSNDHTVKFWARTRPGDPLGAHPVLTA
DGQPAPPAAAATHPHAGDQVMAPLAAAADAEQLATAEAAEMVATEAASPA
LEMAQLPGIGAKIQAPPPPASVLNWGKTQDAVAAAAAAAAAAAAAAAEAE
YGRDDGSYSYGGSAADGGAASGGGSGYARVSVSSGSYGSGGGGGAYQSWG
AGTGAGGGGGGGGSRGGGGVPPDGYVCKRCGIPGHYVQDCPLPRPAGFGF
AGHATAGGPPPPGYVCHACGKTGHWKKDCPDSAPPPYSGGPRQPQQQQHY
SAGPGAPPPRPAYYDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR025829Zn_knuckle_CX2CX3GHX4C
IPR045245Pfs2-like
IPR036322WD40_repeat_dom_sf
IPR036875Znf_CCHC_sf