prot_P-wetherbeei_contig13552.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13552.1.1
Unique Nameprot_P-wetherbeei_contig13552.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length53
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig13552.1.1 vs. uniprot
Match: D8LRI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRI4_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 8.620e-6
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 0 
Query:   13 DQLSFKAGDIITLKRDPSSKGWGLGELKGKV 43
            +QLSFK GD+I+LKR P  +GWGLG+L GK 
Sbjct:   18 EQLSFKQGDVISLKRVPPGEGWGLGKLNGKT 48
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13552.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRI4_ECTSI8.620e-664.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainPFAMPF07653SH3_2coord: 2..43
e-value: 2.2E-5
score: 24.1
NoneNo IPR availableGENE3D2.30.30.40SH3 Domainscoord: 3..44
e-value: 1.6E-7
score: 33.0
IPR036028SH3-like domain superfamilySUPERFAMILY50044SH3-domaincoord: 8..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13552contigP-wetherbeei_contig13552:1413..1571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13552.1.1mRNA_P-wetherbeei_contig13552.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13552 1413..1571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13552.1.1 ID=prot_P-wetherbeei_contig13552.1.1|Name=mRNA_P-wetherbeei_contig13552.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=53bp
SRCLQTRNKTAPDQLSFKAGDIITLKRDPSSKGWGLGELKGKVIKMRCST
CN*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR036028SH3-like_dom_sf