prot_P-wetherbeei_contig13545.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13545.1.1
Unique Nameprot_P-wetherbeei_contig13545.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length302
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig13545.1.1 vs. uniprot
Match: A0A0G4II27_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4II27_PLABS)

HSP 1 Score: 71.2 bits (173), Expect = 2.320e-10
Identity = 67/225 (29.78%), Postives = 105/225 (46.67%), Query Frame = 0 
Query:   23 EKPVSGYKFTDSFHADAAAISALLELPPHPSLASSKAGDSKSTVAIRNLVVDAASLKIYLHVLSHTSRITTLDFFNAGISAEGVRAIADAL--PILPCSTLKLDYNPLKSWEQEDQDASPRFALLVRP-SLLRTLSLRGNGITDSGATAIAAALEDITLPLASLNXXXXXXXXXXXXXXXDSLKINGILAGLSLSRNRLGPAAAASCEALLTGYILDEPVRTKRA 244
            ++P +    +  F AD  A    L + PHP LA        + + +    +D  + +     L   + +TT+ F+NAG+S E +R ++  +  P    + L +D+NPLKS    + DA   FA LV P S L+ L+LRGN +TD+ A  I  A+ +    LA+LN                 L+ +  L  +SLS N +G A   +  A +  + L EP   K A
Sbjct:   35 DQPPNPDTSSGDFLADYPAACRQLGVAPHPRLAV-----HANILEVFGFALDLGTARALSLCLPANTTLTTVHFWNAGLSCEVLRLLSATICRPSCAITRLHIDWNPLKS----EGDAGAAFASLVGPKSPLKILTLRGNQLTDAAAHPILDAVGEGG-QLAALNLSTNLLGPDTATQVGLLLRGDRTLQSVSLSHNPVGDAGLVAILAAMRPFPL-EPAEVKNA 248
[Close]
BLAST of mRNA_P-wetherbeei_contig13545.1.1 vs. uniprot
Match: A0A0H5R5P2_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R5P2_9EUKA)

HSP 1 Score: 68.9 bits (167), Expect = 1.250e-9
Identity = 47/146 (32.19%), Postives = 71/146 (48.63%), Query Frame = 0 
Query:   31 FTDSFHADAAAISALLELPPHPSLASSKAGDSKSTVAIRNLVVDAASLKIYLHVLSHTSRITTLDFFNAGISAEGVRAIADALPILPCSTLKLDYNPLKSWEQEDQDASPRFALLVRP-SLLRTLSLRGNGITDSGATAIAAALED 175
            FT +F  D  +    L + PHP L  ++  D+   + +     D  +       L    RI+TL F NAG++A+ +R +A A+P      L LD+NP+ +      DA      LV P S L+ L+LRGN +TD     I +A+ D
Sbjct:   32 FTGNFPVDYRSACGALGVLPHPKLVPTRIDDNNDAIQVFGFEFDLGTAAALTLCLPSCRRISTLQFLNAGLTADVIRLLATAIPQSAVVRLHLDWNPISN-----HDA---LVGLVGPNSPLQFLNLRGNRLTDGAIQPILSAIAD 169
[Close]
BLAST of mRNA_P-wetherbeei_contig13545.1.1 vs. uniprot
Match: F4NRW4_BATDJ (Uncharacterized protein n=4 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4NRW4_BATDJ)

HSP 1 Score: 56.6 bits (135), Expect = 2.570e-5
Identity = 35/109 (32.11%), Postives = 57/109 (52.29%), Query Frame = 0 
Query:   66 VAIRNLVVDAASLKIYLHVLSHTSRITTLDFFNAGISAEGVRAIADALPILPCSTLKLDYNPLKSWEQEDQDASPRFALLVRPSLLRTLSLRGNGITDSGATAIAAALE 174
            + +R   V   +++     ++  S IT L+F+N G++      +A A+P +   TL LD NP           S   + L   S+L++LSLRGNGI+D G  + +AAL+
Sbjct:  198 IEVRGWKVSIPTMEAINLAITACSTITHLNFWNCGLTESHANLLATAIPTVNIRTLALDQNP-------SIPESFYSSFLGDDSMLKSLSLRGNGISDIGVKSFSAALK 299
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13545.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0G4II27_PLABS2.320e-1029.78Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A0H5R5P2_9EUKA1.250e-932.19Uncharacterized protein n=1 Tax=Spongospora subter... [more]
F4NRW4_BATDJ2.570e-532.11Uncharacterized protein n=4 Tax=Batrachochytrium d... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 148..175
e-value: 4.6E-4
score: 29.5
coord: 88..115
e-value: 60.0
score: 4.6
coord: 177..204
e-value: 3.3
score: 13.5
NoneNo IPR availablePANTHERPTHR46984LEUCINE-RICH REPEAT-CONTAINING PROTEIN 71coord: 55..265
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 75..222
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 180..199
e-value: 0.0025
score: 17.7
coord: 90..110
e-value: 0.57
score: 10.4
coord: 151..170
e-value: 1.5E-4
score: 21.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 60..239
e-value: 1.0E-24
score: 88.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13545contigP-wetherbeei_contig13545:863..1768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13545.1.1mRNA_P-wetherbeei_contig13545.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13545 863..1768 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13545.1.1 ID=prot_P-wetherbeei_contig13545.1.1|Name=mRNA_P-wetherbeei_contig13545.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=302bp
MTAGSTWTASEGDAAGEALNLKEKPVSGYKFTDSFHADAAAISALLELPP
HPSLASSKAGDSKSTVAIRNLVVDAASLKIYLHVLSHTSRITTLDFFNAG
ISAEGVRAIADALPILPCSTLKLDYNPLKSWEQEDQDASPRFALLVRPSL
LRTLSLRGNGITDSGATAIAAALEDITLPLASLNLFDNAIGDAGAAAIAD
SLKINGILAGLSLSRNRLGPAAAASCEALLTGYILDEPVRTKRATADERI
AAANKAVADAAKKKKSAAPVPMPALAAATVRPDGTAFVRGTRTLAILNLG
NN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf