prot_P-wetherbeei_contig13518.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13518.1.1
Unique Nameprot_P-wetherbeei_contig13518.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length141
Homology
BLAST of mRNA_P-wetherbeei_contig13518.1.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.630e-59
Identity = 98/141 (69.50%), Postives = 119/141 (84.40%), Query Frame = 0
Query:    1 MRRLYLLEKPDDRYWAFVISLDKPIRQGQQRYQHLVLQTTSEQREVQVHMKEDELRDKYAGALMPLMEGPMNNLIAKIFKALSNRTVYVTGKFRSVAGAKSVACALGANDGQLYPLNKSFIFIHKPTRIIGFDEIESVEFQ 141
            + +L+LLEKPDDRY AFVISLDKP+RQGQQRYQHLVLQ +  +  + ++M E EL++KY GAL P+M G + NLIAKIFK+LS R V+VTG +RS AGAK V CA+GA++G LYPLNKSFIFIHKPTR+IGFDE+ESVEFQ
Sbjct:  204 INKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQ 344          
BLAST of mRNA_P-wetherbeei_contig13518.1.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 8.190e-57
Identity = 99/139 (71.22%), Postives = 116/139 (83.45%), Query Frame = 0
Query:    3 RLYLLEKPDDRYWAFVISLDKPIRQGQQRYQHLVLQTTSEQREVQVHMKEDELRDKYAGALMPLMEGPMNNLIAKIFKALSNRTVYVTGKFRSVAGAKSVACALGANDGQLYPLNKSFIFIHKPTRIIGFDEIESVEFQ 141
            +L+LLEKPD+RY AFVISLDKPIRQGQQ+YQHLVL+TT ++  + V+M  ++L+ KY   L   M GP++NLIAKIFK LSN+ VYVTGKF S  GAK+V CALGAN+G LYPLNKSFIFIHKPT IIGFDEIESVEFQ
Sbjct:  245 KLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQ 383          
BLAST of mRNA_P-wetherbeei_contig13518.1.1 vs. uniprot
Match: A0A7S2US25_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2US25_9STRA)

HSP 1 Score: 162 bits (409), Expect = 4.300e-47
Identity = 79/139 (56.83%), Postives = 103/139 (74.10%), Query Frame = 0
Query:    3 RLYLLEKPDDRYWAFVISLDKPIRQGQQRYQHLVLQTTSEQREVQVHMKEDELRDKYAGALMPLMEGPMNNLIAKIFKALSNRTVYVTGKFRSVAGAKSVACALGANDGQLYPLNKSFIFIHKPTRIIGFDEIESVEFQ 141
            RL+LL KPDD + AFVI+LDKPIRQGQQRYQ+LV+QTT E  EV +++ E  L+ +Y G L P+M G ++NL+AK FK ++ + V++ GKF +      V CAL AN+G LYPL K FIFIHKP  +I FDE++SVEFQ
Sbjct:   58 RLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVMQTTKEHAEVTINLDEATLKKEYNGDLQPVMNGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFIFIHKPPVLIRFDEVDSVEFQ 196          
BLAST of mRNA_P-wetherbeei_contig13518.1.1 vs. uniprot
Match: A0A7S2P2E6_9STRA (FACT complex subunit SSRP1 n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P2E6_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.540e-46
Identity = 80/139 (57.55%), Postives = 104/139 (74.82%), Query Frame = 0
Query:    3 RLYLLEKPDDRYWAFVISLDKPIRQGQQRYQHLVLQTTSEQREVQVHMKEDELRDKYAGALMPLMEGPMNNLIAKIFKALSNRTVYVTGKFRSVAGAKSVACALGANDGQLYPLNKSFIFIHKPTRIIGFDEIESVEFQ 141
            RL+LL +PDD + AFVI+LDKP+RQGQQRYQ+L+LQTT E  +V +++ ED +   Y G L P+M G ++NLIAK FK ++ + V+V GKF +   AK V CAL AN+G LYPL K FIFIHKP  +I F+E+ESVEFQ
Sbjct:   15 RLFLLPRPDDIHLAFVIALDKPVRQGQQRYQYLILQTTRETSQVTINLDEDVIAKDYGGELQPVMNGALSNLIAKTFKIITRKKVFVPGKFTTAGSAKCVKCALKANEGHLYPLEKQFIFIHKPALLIRFEEVESVEFQ 153          
BLAST of mRNA_P-wetherbeei_contig13518.1.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA)

HSP 1 Score: 166 bits (420), Expect = 5.970e-46
Identity = 83/139 (59.71%), Postives = 104/139 (74.82%), Query Frame = 0
Query:    3 RLYLLEKPDDRYWAFVISLDKPIRQGQQRYQHLVLQTTSEQREVQVHMKEDELRDKYAGALMPLMEGPMNNLIAKIFKALSNRTVYVTGKFRSVAGAKSVACALGANDGQLYPLNKSFIFIHKPTRIIGFDEIESVEFQ 141
            RL+LL KPDD + AFVI+LDKPIRQGQQRYQ LVLQTT E  EV V++ E EL ++Y G L P+M+G + NLIAK FK ++ + V++ GKF +      V CAL AN+G LYPL KSF+FIHKP  +I FDE++SVEFQ
Sbjct:  278 RLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQ 416          
BLAST of mRNA_P-wetherbeei_contig13518.1.1 vs. uniprot
Match: A0A7R9VM85_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VM85_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.180e-44
Identity = 76/139 (54.68%), Postives = 104/139 (74.82%), Query Frame = 0
Query:    3 RLYLLEKPDDRYWAFVISLDKPIRQGQQRYQHLVLQTTSEQREVQVHMKEDELRDKYAGALMPLMEGPMNNLIAKIFKALSNRTVYVTGKFRSVAGAKSVACALGANDGQLYPLNKSFIFIHKPTRIIGFDEIESVEFQ 141
            RL+LL KPD+ + AFVI+LDKPIRQGQQRYQ+LV+QTT +  E+ V++ E+ L  +Y G L P+M G ++NL+AK FK ++ + V++ GKF +      V CAL A++G LYPL K FIFIHKPT ++ FD++ESVEFQ
Sbjct:  112 RLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQ 250          
BLAST of mRNA_P-wetherbeei_contig13518.1.1 vs. uniprot
Match: A0A6U3RIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RIK7_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.790e-44
Identity = 79/139 (56.83%), Postives = 104/139 (74.82%), Query Frame = 0
Query:    3 RLYLLEKPDDRYWAFVISLDKPIRQGQQRYQHLVLQTTSEQREVQVHMKEDELRDKYAGALMPLMEGPMNNLIAKIFKALSNRTVYVTGKFRSVAGAKSVACALGANDGQLYPLNKSFIFIHKPTRIIGFDEIESVEFQ 141
            +L+LL KPDD + AFVI+LDKPIRQGQQRYQ LV+QTT EQ EV V++ E+ L+ +Y G L P+M G ++NL+AK FK ++ + V++ GKF +      V CAL AN+G LYPL K F+FIHKP  ++ FDE+ESVEFQ
Sbjct:  288 KLFLLPKPDDVHMAFVIALDKPIRQGQQRYQMLVMQTTKEQSEVSVNLDEETLQSEYGGDLQPMMYGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFVFIHKPPVLVRFDEVESVEFQ 426          
BLAST of mRNA_P-wetherbeei_contig13518.1.1 vs. uniprot
Match: A0A1E7FQX7_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQX7_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.860e-43
Identity = 79/139 (56.83%), Postives = 103/139 (74.10%), Query Frame = 0
Query:    3 RLYLLEKPDDRYWAFVISLDKPIRQGQQRYQHLVLQTTSEQREVQVHMKEDELRDKYAGALMPLMEGPMNNLIAKIFKALSNRTVYVTGKFRSVAGAKSVACALGANDGQLYPLNKSFIFIHKPTRIIGFDEIESVEFQ 141
            RL+LL KPDD + AFVI+LDKPIRQGQQRYQ+LVLQT  +  EV+V++ ED L+ +Y   L P+M G ++NL+AK FK ++ + V++ GKF +      V CAL AN+G LYPL K FIFIHKP  +I F+E+ESVEFQ
Sbjct:  227 RLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFIFIHKPPVLIRFNEVESVEFQ 365          
BLAST of mRNA_P-wetherbeei_contig13518.1.1 vs. uniprot
Match: A0A7S3L0G9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L0G9_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.110e-42
Identity = 80/141 (56.74%), Postives = 104/141 (73.76%), Query Frame = 0
Query:    1 MRRLYLLEKPDDRYWAFVISLDKPIRQGQQRYQHLVLQTTSEQREVQVHMKEDELRDKYAGALMPLMEGPMNNLIAKIFKALSNRTVYVTGKFRSVAGAKSVACALGANDGQLYPLNKSFIFIHKPTRIIGFDEIESVEFQ 141
            + RL+LL KPD+ +  FVI+LDKPIRQGQQRYQ+LVLQ T +  EV V+M E+ L+ +Y G L P+M G ++NLIAK FK +S + V++ GKF +      V CA+ AN+G LYPL K F+FIHKPT II F+EIESV+FQ
Sbjct:  280 INRLFLLPKPDEVHMVFVIALDKPIRQGQQRYQYLVLQATKDPDEVTVNMDEEALQKEYNGELQPVMRGALSNLIAKTFKVISKKKVFIPGKFANANQQACVKCAVRANEGFLYPLEKQFVFIHKPTIIIRFNEIESVDFQ 420          
BLAST of mRNA_P-wetherbeei_contig13518.1.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.210e-42
Identity = 77/139 (55.40%), Postives = 103/139 (74.10%), Query Frame = 0
Query:    3 RLYLLEKPDDRYWAFVISLDKPIRQGQQRYQHLVLQTTSEQREVQVHMKEDELRDKYAGALMPLMEGPMNNLIAKIFKALSNRTVYVTGKFRSVAGAKSVACALGANDGQLYPLNKSFIFIHKPTRIIGFDEIESVEFQ 141
            RL+LL KPDD + AFVI+LDKPIRQGQQRYQ+LVLQT  +  E++V++ ED L+ +Y   L P+M G ++NL+AK FK ++ + V++ GKF +      V CAL AN+G LYPL K F+FIHKP  +I F+E+ESVEFQ
Sbjct:  282 RLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQ 420          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13518.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C825_9STRA2.630e-5969.50FACT complex subunit SSRP1 n=1 Tax=Tribonema minus... [more]
D7FLF8_ECTSI8.190e-5771.22FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
A0A7S2US25_9STRA4.300e-4756.83FACT complex subunit SSRP1 (Fragment) n=1 Tax=Atth... [more]
A0A7S2P2E6_9STRA2.540e-4657.55FACT complex subunit SSRP1 n=2 Tax=Leptocylindrus ... [more]
A0A7S2SJ65_9STRA5.970e-4659.71FACT complex subunit SSRP1 (Fragment) n=1 Tax=Euca... [more]
A0A7R9VM85_9STRA1.180e-4454.68FACT complex subunit SSRP1 (Fragment) n=1 Tax=Pseu... [more]
A0A6U3RIK7_9STRA2.790e-4456.83Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1E7FQX7_9STRA3.860e-4356.83FACT complex subunit SSRP1 (Fragment) n=1 Tax=Frag... [more]
A0A7S3L0G9_9STRA1.110e-4256.74Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S0TAB4_9STRA1.210e-4255.40FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000969Structure-specific recognition proteinPRINTSPR00887SSRCOGNITIONcoord: 125..141
score: 47.22
coord: 16..32
score: 66.91
coord: 107..125
score: 57.24
coord: 80..93
score: 42.86
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 90..141
e-value: 2.2E-14
score: 55.3
NoneNo IPR availableGENE3D2.30.29.150coord: 1..89
e-value: 2.3E-24
score: 87.6
NoneNo IPR availablePANTHERPTHR45849FACT COMPLEX SUBUNIT SSRP1coord: 2..141
NoneNo IPR availablePANTHERPTHR45849:SF1FACT COMPLEX SUBUNIT SSRP1coord: 2..141
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 2..140
IPR013719Domain of unknown function DUF1747PFAMPF08512Rtt106coord: 101..141
e-value: 3.0E-10
score: 40.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13518contigP-wetherbeei_contig13518:96..1577 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13518.1.1mRNA_P-wetherbeei_contig13518.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13518 96..1577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13518.1.1 ID=prot_P-wetherbeei_contig13518.1.1|Name=mRNA_P-wetherbeei_contig13518.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=141bp
MRRLYLLEKPDDRYWAFVISLDKPIRQGQQRYQHLVLQTTSEQREVQVHM
KEDELRDKYAGALMPLMEGPMNNLIAKIFKALSNRTVYVTGKFRSVAGAK
SVACALGANDGQLYPLNKSFIFIHKPTRIIGFDEIESVEFQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000969SSrcognition
IPR011993PH-like_dom_sf
IPR013719DUF1747