prot_P-wetherbeei_contig13512.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13512.1.1
Unique Nameprot_P-wetherbeei_contig13512.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length180
Homology
BLAST of mRNA_P-wetherbeei_contig13512.1.1 vs. uniprot
Match: A0A836CK85_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK85_9STRA)

HSP 1 Score: 217 bits (552), Expect = 8.840e-69
Identity = 114/175 (65.14%), Postives = 134/175 (76.57%), Query Frame = 0
Query:    4 EAAVLCALVAGASAFTGTPLVGVAKTA--ARGSSQVSMMA-KSASVPFMARPKALDGTVPGDAGFDPLGFSDWIDLKFLREAEIKHGRICMLAWLGYVATDLGVHLPGDMHALSSLEAHDAAVKFGAMPQILLFISAFEAVSTPAVVQMVNGSGREPGYFGFDPLGFAKTDAKMV 175
            +A  +  LV  A+AFT       A+ A  A   SQV+MMA KSAS+PFM +P+ LDGTVPGD GFDPLGFS+W++L FLREAEIKHGRICMLA  G+VA DLG+HLPGD+H + SLEAHD AVKFGAM QILL+ S FEA+ST  VVQM+NGSGR+PGYFGFDPL F+K  A   
Sbjct:    5 KALAVAGLVGSAAAFTAPSAFAGARVARSAVAPSQVTMMAGKSASIPFMPKPEKLDGTVPGDVGFDPLGFSNWVNLDFLREAEIKHGRICMLAVAGWVAVDLGLHLPGDVHNVGSLEAHDTAVKFGAMSQILLWTSIFEAISTVGVVQMLNGSGRQPGYFGFDPLNFSKDAASKA 179          
BLAST of mRNA_P-wetherbeei_contig13512.1.1 vs. uniprot
Match: D7FWB9_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB9_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 2.200e-54
Identity = 94/156 (60.26%), Postives = 114/156 (73.08%), Query Frame = 0
Query:    9 CALVAGASAFTGTPLVGVAKTAARGSSQVSMMAKSASVPFMARPKALDGTVPGDAGFDPLGFSDWIDLKFLREAEIKHGRICMLAWLGYVATDLGVHLPGDMHALSSLEAHDAAVKFGAMPQILLFISAFEAVSTPAVVQMVNGSGREPGYFGFDP 164
            C+L   ASA    P   + + A+  S       KS S+PFM +P  LDGT+ GDAGFDPLGFS++I L FLREAE+KHGRIC LA +G+ ATDLG  LPG  HA++S+ AHDAAV  GAMPQILL++SAFEA+ST AV+QM+ GSGR PG FGFDP
Sbjct:    7 CSLAVLASASAFVPPAQLPRVASSNSGMSMQATKSKSLPFMPQPAKLDGTMAGDAGFDPLGFSNFIPLDFLREAELKHGRICQLAVVGFAATDLGFRLPGAEHAVASIAAHDAAVATGAMPQILLWVSAFEAISTVAVIQMLEGSGRIPGDFGFDP 162          
BLAST of mRNA_P-wetherbeei_contig13512.1.1 vs. uniprot
Match: A0A6V1QB66_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QB66_HETAK)

HSP 1 Score: 174 bits (441), Expect = 4.710e-52
Identity = 98/174 (56.32%), Postives = 121/174 (69.54%), Query Frame = 0
Query:    4 EAAVLCALVAGASAFTGTPLVG---VAKTAARGSSQVSMMA-KSASVPFMARPKALDGTVPGDAGFDPLGFSDWIDLKFLREAEIKHGRICMLAWLGYVATDLGVHLPGDMHALSSLEAHDAAVKFGAMPQILLFISAFEAVSTPAVVQMVNGSGREPGYFGFDPLGFAKTDAK 173
            + A   AL AGA AF   P+ G   VAKT        +MMA KSA++PFM +P  LD ++PG AGFDP+GFSDW+ + +LREAEIKHGRICMLA +GY+ATD+G+HLPGDMH   SL AHD A+K GAM Q+L+ I   E     A+ + + GSGR PG FGFDPLGF+KT  K
Sbjct:    3 KVAAFAALFAGADAFVA-PMDGPKNVAKT--------TMMAEKSAALPFMPKPANLDESLPGYAGFDPVGFSDWLSVDWLREAEIKHGRICMLAVVGYIATDMGLHLPGDMHNYDSLLAHDQAIKNGAMQQLLMGIGWAETFGFLAIGETMRGSGRAPGDFGFDPLGFSKTPEK 167          
BLAST of mRNA_P-wetherbeei_contig13512.1.1 vs. uniprot
Match: W7T6P5_9STRA (Light-harvesting protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6P5_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.400e-51
Identity = 91/147 (61.90%), Postives = 112/147 (76.19%), Query Frame = 0
Query:   29 TAARGSSQVSMMA-KSASVPFMARPKALDGTVPGDAGFDPLGFSDWIDLKFLREAEIKHGRICMLAWLGYVATDLGVHLPGDMHALSSLEAHDAAVKFGAMPQILLFISAFEAVSTPAVVQMVNGSGREPGYFGFDPLGFAKTDAKM 174
            T ARG+  VSMMA KS S+PF+ RP ALDGT PGD GFDP+GF+ W+ L +L+EAEIKH RI MLA LG++  D  VHLPGD+HA+SSL AHD AVK GA+ QIL++ S  EA+S  A+ QM+ GSGR+PG F FDPLGFAK +  +
Sbjct:   93 TRARGA--VSMMAEKSKSIPFLPRPPALDGTAPGDVGFDPVGFTSWLPLAYLQEAEIKHCRIAMLATLGWIVADF-VHLPGDVHAVSSLAAHDVAVKSGALAQILIWTSIAEAISVVAISQMLEGSGRQPGDFKFDPLGFAKDEQTL 236          
BLAST of mRNA_P-wetherbeei_contig13512.1.1 vs. uniprot
Match: A0A4D9CSZ5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSZ5_9STRA)

HSP 1 Score: 171 bits (434), Expect = 5.090e-51
Identity = 96/165 (58.18%), Postives = 120/165 (72.73%), Query Frame = 0
Query:   11 LVAGASAFTGTPLVGVAKTAARGSSQVSMMA-KSASVPFMARPKALDGTVPGDAGFDPLGFSDWIDLKFLREAEIKHGRICMLAWLGYVATDLGVHLPGDMHALSSLEAHDAAVKFGAMPQILLFISAFEAVSTPAVVQMVNGSGREPGYFGFDPLGFAKTDAKM 174
            L+  A+AF   PL+  A T  RG+  VSMMA KS S+PF+ RP ALDGT  GD GFDP+GF+ W+ L +L+EAEIKH RI MLA LG++  D  VHLPGD+HA+SSL AHD AVK GA+ QIL++ S  EA+S  A+ QM+ GSGR+PG F FDPLGFAK +  +
Sbjct:    9 LIGAAAAFV--PLM-PATTRTRGA--VSMMAEKSKSIPFLPRPPALDGTAAGDVGFDPVGFTSWLPLAYLQEAEIKHCRIAMLATLGWIVADF-VHLPGDVHAVSSLAAHDVAVKSGALAQILIWTSIAEAISVIAISQMLEGSGRQPGDFKFDPLGFAKDEQTL 167          
BLAST of mRNA_P-wetherbeei_contig13512.1.1 vs. uniprot
Match: A0A7S4ETT6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ETT6_CHRCT)

HSP 1 Score: 168 bits (425), Expect = 2.270e-49
Identity = 92/169 (54.44%), Postives = 119/169 (70.41%), Query Frame = 0
Query:    4 EAAVLCALVAGASAFTGTPLVGVAKTAARGSSQVSMMAKSASVPFMARPKALDGTVPGDAGFDPLGFSDWIDLKFLREAEIKHGRICMLAWLGYVATDLGVHLPGDMHALSSLEAHDAAVKFGAMPQILLFISAFEAVSTPAVVQMVNG-SGREPGYFGFDPLGFAKTD 171
            + A + +LV+G+ AFT      V +T A   +    M KS ++PF+  PKALDG++ GD GFDPL  SD +DLKF+REAE+KHGRICMLAWLGYV  DLG+  PG   ++SSL AHD AVK GAM  +L+ +S FEA+STPAV +M++G S R+PG F  DP G+AK D
Sbjct:   24 QQATMLSLVSGSLAFTAPLTPAVTQTRAHAPN----MLKSQALPFVEAPKALDGSMVGDVGFDPLNLSDGLDLKFMREAELKHGRICMLAWLGYVVVDLGITAPG-APSVSSLAAHDTAVKEGAMYLLLMLVSGFEAISTPAVYEMMSGQSDRKPGDFQLDPFGWAKGD 187          
BLAST of mRNA_P-wetherbeei_contig13512.1.1 vs. uniprot
Match: A0A0G4FMW2_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FMW2_VITBC)

HSP 1 Score: 166 bits (419), Expect = 2.600e-48
Identity = 81/128 (63.28%), Postives = 100/128 (78.12%), Query Frame = 0
Query:   43 SASVPFMARPKALDGTVPGDAGFDPLGFSDWIDLKFLREAEIKHGRICMLAWLGYVATDLGVHLPGDMHALSSLEAHDAAVKFGAMPQILLFISAFEAVSTPAVVQMVNGSGREPGYFGFDPLGFAKT 170
            S S+PFM RP  LDGT+  D GFDP GFS+W+DL++ REAEIKHGR+CMLA +GY+  +    LPG++H +SSLEAH+ AV++GAM QILL+IS  E  ST AVVQM +GSGR+PG FGFDPLGF K 
Sbjct:   69 SKSIPFMPRPYRLDGTMAADDGFDPFGFSNWLDLRWAREAEIKHGRLCMLATVGYIFAEY-FKLPGEVHQVSSLEAHNKAVEYGAMSQILLWISFAEIFSTIAVVQMYDGSGRQPGEFGFDPLGFCKN 195          
BLAST of mRNA_P-wetherbeei_contig13512.1.1 vs. uniprot
Match: F0Y5A3_AURAN (Putative plastid light harvesting protein isoform 33 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5A3_AURAN)

HSP 1 Score: 162 bits (410), Expect = 2.180e-47
Identity = 91/170 (53.53%), Postives = 112/170 (65.88%), Query Frame = 0
Query:    7 VLCALVAGASAFTGTPLVGVAKTAARGSSQVSMMAKSASVPFMARPKALDGTVPGDAGFDPLGFSDWIDLKFLREAEIKHGRICMLAWLGYVATDLGVHLPGDMHALSSLEAHDAAVKFGAMPQILLFISAFEAVSTPAVVQMV-NGSGREPGYFGFDPLGFAKTDAKMV 175
            VL +L A ASA      V  AK+A   + Q      S ++PFM +P+ALDGT  GD GFDP GF+   D+K+LREAEIKHGRICMLAW G+VATDLG  LPGDMH +SS+ AHD A K+GAM Q+ L++S  E + +  V QM+  GS REPG +G DPL F  T  K  
Sbjct:    6 VLISLAASASALVAP--VPAAKSAVAMNYQA-----SEALPFMEKPEALDGTYAGDVGFDPFGFTSIFDVKWLREAEIKHGRICMLAWTGFVATDLGFTLPGDMHQVSSVLAHDVACKYGAMQQLFLWLSFTEVILSAGVAQMMWMGSPREPGDYGLDPLDFCSTPEKKA 168          
BLAST of mRNA_P-wetherbeei_contig13512.1.1 vs. uniprot
Match: A0A6J4B112_9STRA (Fucoxanthin chlorophyll a/c protein 6 n=1 Tax=Chaetoceros gracilis TaxID=184592 RepID=A0A6J4B112_9STRA)

HSP 1 Score: 159 bits (402), Expect = 4.220e-46
Identity = 94/175 (53.71%), Postives = 121/175 (69.14%), Query Frame = 0
Query:    6 AVLCALVAGASAFTGTPLVGVAKTAARGSSQVSMMAKSASVPFMARPKALDGTVPGDAGFDPLGFSDWIDLKFLREAEIKHGRICMLAWLGYVATDLGVH---LPGDMHALSSLEAHDAAVKFGAMPQILLFISAFEAVSTPAVVQMV-NGSGREPGYFGFDPLGF--AKTDAKM 174
            A+L +L+A A+AF  +   G    AAR S+ +    KS ++PF+  P+ L G V GDAGFDP  FSD+  + FLREAEIKHGRICMLAWLG+VA DLG     LP     L+++ AHDA V+ GAM QI L+ S FEA+ST +V+QM+   SGREPGYFGFDPLGF   K++A++
Sbjct:    4 ALLASLIASAAAFAPSSSTG----AARASTALDAGKKSQALPFLPYPENLAGYV-GDAGFDPFRFSDFAPMDFLREAEIKHGRICMLAWLGFVAVDLGARIYPLPEAYEGLTAVTAHDALVQQGAMSQIFLWCSVFEAISTVSVIQMLYEESGREPGYFGFDPLGFLNGKSEAEV 173          
BLAST of mRNA_P-wetherbeei_contig13512.1.1 vs. uniprot
Match: A0A7S3ZSN9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSN9_9STRA)

HSP 1 Score: 158 bits (400), Expect = 8.220e-46
Identity = 82/156 (52.56%), Postives = 114/156 (73.08%), Query Frame = 0
Query:   10 ALVAGASAFTGTPLVGVAKTAARGSSQVSMMAKSASVPFMARPKALDGTVPGDAGFDPLGFSDWIDLKFLREAEIKHGRICMLAWLGYVATDLGVHLPGDMHALSSLEAHDAAVKFGAMPQILLFISAFEAVSTPAVVQMVNGSGREPGYFGFDPL 165
            AL AGASA      V     A + S++VS + +S ++PF+ RP+ L G V GD GFDPLG SDW+ +++LRE+E+KHGR+CMLA +G+VATDLG  LPG+MH ++S+ AHD AV  GAM QI ++I+  E +   A+++M++GSGR+PG FGFDPL
Sbjct:   13 ALAAGASALMAP--VXXXXXATQLSAEVSSVERSPAMPFLPRPQKLKGMV-GDKGFDPLGLSDWVPVEWLRESELKHGRVCMLAVVGFVATDLGFRLPGEMHNVASINAHDMAVDMGAMTQIGIWIAVAECIGYLAILEMLDGSGRQPGDFGFDPL 165          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13512.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CK85_9STRA8.840e-6965.14Light harvesting complex protein n=1 Tax=Tribonema... [more]
D7FWB9_ECTSI2.200e-5460.26Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6V1QB66_HETAK4.710e-5256.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7T6P5_9STRA3.400e-5161.90Light-harvesting protein n=2 Tax=Nannochloropsis g... [more]
A0A4D9CSZ5_9STRA5.090e-5158.18Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4ETT6_CHRCT2.270e-4954.44Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A0G4FMW2_VITBC2.600e-4863.28Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
F0Y5A3_AURAN2.180e-4753.53Putative plastid light harvesting protein isoform ... [more]
A0A6J4B112_9STRA4.220e-4653.71Fucoxanthin chlorophyll a/c protein 6 n=1 Tax=Chae... [more]
A0A7S3ZSN9_9STRA8.220e-4652.56Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 39..178
e-value: 1.2E-29
score: 105.6
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 10..172
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 36..174
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 52..173
e-value: 9.4E-28
score: 97.8
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 10..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13512contigP-wetherbeei_contig13512:143..1812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13512.1.1mRNA_P-wetherbeei_contig13512.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13512 143..1812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13512.1.1 ID=prot_P-wetherbeei_contig13512.1.1|Name=mRNA_P-wetherbeei_contig13512.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp
MKCEAAVLCALVAGASAFTGTPLVGVAKTAARGSSQVSMMAKSASVPFMA
RPKALDGTVPGDAGFDPLGFSDWIDLKFLREAEIKHGRICMLAWLGYVAT
DLGVHLPGDMHALSSLEAHDAAVKFGAMPQILLFISAFEAVSTPAVVQMV
NGSGREPGYFGFDPLGFAKTDAKMVSGRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln