prot_P-wetherbeei_contig13400.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13400.1.1
Unique Nameprot_P-wetherbeei_contig13400.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length50
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13400.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF15227zf-C3HC4_4coord: 6..41
e-value: 6.7E-8
score: 32.6
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 3..39
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..44
e-value: 2.7E-8
score: 35.1
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 21..30
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 6..42
score: 9.199359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13400contigP-wetherbeei_contig13400:348..497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13400.1.1mRNA_P-wetherbeei_contig13400.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13400 348..515 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13400.1.1 ID=prot_P-wetherbeei_contig13400.1.1|Name=mRNA_P-wetherbeei_contig13400.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=50bp
MTDAFCAICSDLLEAPTSGACRHNFCRACVTGLVRIASEASCHSTIWWT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR001841Znf_RING