prot_P-wetherbeei_contig1288.2.3 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1288.2.3
Unique Nameprot_P-wetherbeei_contig1288.2.3
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length185
Homology
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BLAST of mRNA_P-wetherbeei_contig1288.2.3 vs. uniprot
Match: A0A835YZF9_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.240e-18
Identity = 40/67 (59.70%), Postives = 50/67 (74.63%), Query Frame = 0 
Query:   47 GVLTTFIEENGGGNITDTVYAGKISFSPQGLTHFELKIGCTPALLISAFRDDDFSVQQTSTTALAGL 113
            GVLT F+EENGG  I +TV AG+ +F PQGLTH ++ +GCTPA +I+A   DDF VQ  +TTAL GL
Sbjct:   78 GVLTAFVEENGGRTIENTVVAGEAAFFPQGLTHMQVNMGCTPATMIAALGSDDFGVQTITTTALEGL 144
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BLAST of mRNA_P-wetherbeei_contig1288.2.3 vs. uniprot
Match: A0A836CNU2_9STRA (RmlC-like cupin domain-containing protein n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU2_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 6.910e-17
Identity = 38/67 (56.72%), Postives = 49/67 (73.13%), Query Frame = 0 
Query:   47 GVLTTFIEENGGGNITDTVYAGKISFSPQGLTHFELKIGCTPALLISAFRDDDFSVQQTSTTALAGL 113
            GVLT F+EENGG  I +T+  G+ +F PQGLTH ++ +GCTPA +I+A   DDF VQ  +TTAL GL
Sbjct:  129 GVLTAFVEENGGRTIENTIVTGEAAFFPQGLTHVQVNMGCTPATMIAALGSDDFGVQTITTTALKGL 195
[Close]
BLAST of mRNA_P-wetherbeei_contig1288.2.3 vs. uniprot
Match: A0A835Z488_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z488_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.330e-15
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 0 
Query:   47 GVLTTFIEENGGGNITDTVYAGKISFSPQGLTHFELKIGCTPALLISAFRDDDFSVQQTSTTALAGL 113
            GVLT F+EENGG  I +T+  G+ +F PQGLTH ++ +GC PA +I+A   DDF VQ  ++ AL GL
Sbjct:  130 GVLTAFVEENGGRTIENTIVTGEAAFFPQGLTHVQVNMGCAPATMIAALGSDDFGVQTITSAALKGL 196
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1288.2.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835YZF9_9STRA3.240e-1859.70RmlC-like cupin domain-containing protein n=1 Tax=... [more]
A0A836CNU2_9STRA6.910e-1756.72RmlC-like cupin domain-containing protein n=7 Tax=... [more]
A0A835Z488_9STRA7.330e-1552.24RmlC-like cupin domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 45..115
e-value: 8.1E-9
score: 37.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..145
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 46..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1288contigP-wetherbeei_contig1288:5284..5838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1288.2.3mRNA_P-wetherbeei_contig1288.2.3Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1288 4615..5979 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1288.2.3 ID=prot_P-wetherbeei_contig1288.2.3|Name=mRNA_P-wetherbeei_contig1288.2.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=185bp
MLSFHFFDPNRPVSPTATSLAAVRHQYPPRAPTSNGAPDCDQRGPGGVLT
TFIEENGGGNITDTVYAGKISFSPQGLTHFELKIGCTPALLISAFRDDDF
SVQQTSTTALAGLPKGWRRPSASPSPNLLPSLPASTSIPPRAPRNAASAA
ASLKTCLRMARCTHVHVDERQRGSRLRGRKGGRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf