prot_P-wetherbeei_contig12508.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12508.1.1
Unique Nameprot_P-wetherbeei_contig12508.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length66
Homology
BLAST of mRNA_P-wetherbeei_contig12508.1.1 vs. uniprot
Match: D8LG80_ECTSI (40S ribosomal protein S30 n=2 Tax=PX clade TaxID=569578 RepID=D8LG80_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.310e-33
Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0
Query:    1 MGKVHGSLARAGKVKGQTPKVDKQEKKKNPAGRAKKRMQYNRRFVNVVTGLGGKRLGPNSNAAKV 65
            MGKVHGSLARAGKVKGQTPK+DK EKKK P GRAKKRMQYNRRFVNVVTG+GGKRLGPNSNAAKV
Sbjct:    1 MGKVHGSLARAGKVKGQTPKIDKIEKKKQPRGRAKKRMQYNRRFVNVVTGVGGKRLGPNSNAAKV 65          
BLAST of mRNA_P-wetherbeei_contig12508.1.1 vs. uniprot
Match: K0R2S3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R2S3_THAOC)

HSP 1 Score: 111 bits (277), Expect = 3.820e-30
Identity = 55/65 (84.62%), Postives = 61/65 (93.85%), Query Frame = 0
Query:    1 MGKVHGSLARAGKVKGQTPKVDKQEKKKNPAGRAKKRMQYNRRFVNVVTGLGGKRLGPNSNAAKV 65
            MGKVHGSLARAGKVKGQTPKV+ QEKKK P GRAKKRMQYNRR+VNVVTG+GGK++GPNSNA K+
Sbjct:   58 MGKVHGSLARAGKVKGQTPKVEAQEKKKQPRGRAKKRMQYNRRYVNVVTGMGGKKVGPNSNADKM 122          
BLAST of mRNA_P-wetherbeei_contig12508.1.1 vs. uniprot
Match: A0A7S2V4V4_9STRA (Hypothetical protein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2V4V4_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.780e-29
Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 0
Query:    2 GKVHGSLARAGKVKGQTPKVDKQEKKKNPAGRAKKRMQYNRRFVNVVTGLGGKRLGPNSNAAKV 65
            GKVHGSLARAGKVKGQTPKV+ QEKKK   GRAKKRMQYNRRFVNVVTG+GGK+LGPNSNA+KV
Sbjct:   77 GKVHGSLARAGKVKGQTPKVEAQEKKKKLTGRAKKRMQYNRRFVNVVTGVGGKKLGPNSNASKV 140          
BLAST of mRNA_P-wetherbeei_contig12508.1.1 vs. uniprot
Match: A0A1E7F7Q1_9STRA (40S ribosomal protein S30 n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A1E7F7Q1_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.130e-28
Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = 0
Query:    1 MGKVHGSLARAGKVKGQTPKVDKQEK-KKNPAGRAKKRMQYNRRFVNVVTGLGGKRLGPNSNAAKV 65
            MGKVHGSLARAGKVK QTPKV+KQE+ KK P GRAKKR+QYNRR+VNVVTG+GGKR+GPNSNA K+
Sbjct:    1 MGKVHGSLARAGKVKNQTPKVEKQEEGKKQPRGRAKKRLQYNRRYVNVVTGMGGKRVGPNSNADKM 66          
BLAST of mRNA_P-wetherbeei_contig12508.1.1 vs. uniprot
Match: A0A8J2X0V5_9STRA (Hypothetical protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=A0A8J2X0V5_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.070e-27
Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 0
Query:    2 GKVHGSLARAGKVKGQTPKVDKQEKKKNPAGRAKKRMQYNRRFVNVVTGLGGKRLGPNSNA 62
            GKVHGSLARAGKVKGQTPKV+KQEKKK P GRAKKRM YNRRFVNVV G+GGKR GPNSNA
Sbjct:   91 GKVHGSLARAGKVKGQTPKVEKQEKKKLPTGRAKKRMLYNRRFVNVVAGVGGKRFGPNSNA 151          
BLAST of mRNA_P-wetherbeei_contig12508.1.1 vs. uniprot
Match: A0A4D9D2L7_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2L7_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.510e-27
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 0
Query:    2 GKVHGSLARAGKVKGQTPKVDKQEKKKNPAGRAKKRMQYNRRFVNVVTGLGGKRLGPNSNAAKV 65
            GKVHGSLARAGKVKGQTPKV+KQEK+K P GRAKKR+ Y+RRF+NV TG+GGKRLGPNSNA K+
Sbjct:   77 GKVHGSLARAGKVKGQTPKVEKQEKRKTPRGRAKKRVLYSRRFLNVATGVGGKRLGPNSNADKM 140          
BLAST of mRNA_P-wetherbeei_contig12508.1.1 vs. uniprot
Match: A0A2P6VFJ9_9CHLO (40S ribosomal protein S30 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VFJ9_9CHLO)

HSP 1 Score: 100 bits (250), Expect = 8.690e-27
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0
Query:    1 MGKVHGSLARAGKVKGQTPKVDKQEKKKNPAGRAKKRMQYNRRFVNVVTGLGGKRLGPNS 60
            MGKVHGSLARAGKV+GQTPKV KQEKKK P GRA+KR+QYNRRFVNVV G GGK+ GPNS
Sbjct:    1 MGKVHGSLARAGKVRGQTPKVPKQEKKKTPKGRARKRLQYNRRFVNVVVGFGGKKKGPNS 60          
BLAST of mRNA_P-wetherbeei_contig12508.1.1 vs. uniprot
Match: A0A484DSZ2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSZ2_BRELC)

HSP 1 Score: 99.8 bits (247), Expect = 4.780e-26
Identity = 55/65 (84.62%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    2 GKVHGSLARAGKVKGQTPKVDKQE-KKKNPAGRAKKRMQYNRRFVNVVTGLGGKRLGPNSNAAKV 65
            GKVHGSLARAGKVKGQTPKV KQE  KK   GRAKKR QYNRRFVNVV G GGK+LGPNSNAAKV
Sbjct:   21 GKVHGSLARAGKVKGQTPKVPKQEDSKKALTGRAKKRWQYNRRFVNVVAGSGGKKLGPNSNAAKV 85          
BLAST of mRNA_P-wetherbeei_contig12508.1.1 vs. uniprot
Match: G4YM34_PHYSP (Uncharacterized protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=G4YM34_PHYSP)

HSP 1 Score: 99.8 bits (247), Expect = 4.920e-26
Identity = 54/64 (84.38%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    2 GKVHGSLARAGKVKGQTPKVDKQE-KKKNPAGRAKKRMQYNRRFVNVVTGLGGKRLGPNSNAAK 64
            GKVHGSLARAGKVKGQTPKV KQE  KK   GRAKKR QYNRRFVNVV G+GGK+LGPNSNAAK
Sbjct:   22 GKVHGSLARAGKVKGQTPKVPKQEDSKKALTGRAKKRWQYNRRFVNVVAGMGGKKLGPNSNAAK 85          
BLAST of mRNA_P-wetherbeei_contig12508.1.1 vs. uniprot
Match: A0A7S3LSY6_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LSY6_9STRA)

HSP 1 Score: 101 bits (252), Expect = 4.980e-26
Identity = 52/64 (81.25%), Postives = 58/64 (90.62%), Query Frame = 0
Query:    2 GKVHGSLARAGKVKGQTPKVDKQEKKKNPAGRAKKRMQYNRRFVNVVTGLGGKRLGPNSNAAKV 65
            GKVHGSLARAGKVKGQTPKV KQ+KK+ P GRAKKRMQYNRRFVNVV G  GKR+GPN+NAA++
Sbjct:   77 GKVHGSLARAGKVKGQTPKVAKQDKKRVPTGRAKKRMQYNRRFVNVVNGGMGKRVGPNNNAARL 140          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12508.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG80_ECTSI1.310e-3392.3140S ribosomal protein S30 n=2 Tax=PX clade TaxID=5... [more]
K0R2S3_THAOC3.820e-3084.62Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2V4V4_9STRA1.780e-2987.50Hypothetical protein n=3 Tax=Ochrophyta TaxID=2696... [more]
A0A1E7F7Q1_9STRA2.130e-2881.8240S ribosomal protein S30 n=4 Tax=Bacillariophyta ... [more]
A0A8J2X0V5_9STRA2.070e-2788.52Hypothetical protein n=3 Tax=Pelagomonadales TaxID... [more]
A0A4D9D2L7_9STRA2.510e-2781.25Ubiquitin-like domain-containing protein n=2 Tax=M... [more]
A0A2P6VFJ9_9CHLO8.690e-2783.3340S ribosomal protein S30 n=1 Tax=Micractinium con... [more]
A0A484DSZ2_BRELC4.780e-2684.62Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
G4YM34_PHYSP4.920e-2684.38Uncharacterized protein n=14 Tax=Peronosporaceae T... [more]
A0A7S3LSY6_9STRA4.980e-2681.25Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006846Ribosomal protein S30PFAMPF04758Ribosomal_S30coord: 3..61
e-value: 1.5E-29
score: 102.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availablePANTHERPTHR1265040S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBIcoord: 2..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12508contigP-wetherbeei_contig12508:1778..1975 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12508.1.1mRNA_P-wetherbeei_contig12508.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12508 1778..1978 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12508.1.1 ID=prot_P-wetherbeei_contig12508.1.1|Name=mRNA_P-wetherbeei_contig12508.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=66bp
MGKVHGSLARAGKVKGQTPKVDKQEKKKNPAGRAKKRMQYNRRFVNVVTG
LGGKRLGPNSNAAKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006846Ribosomal_S30