prot_P-wetherbeei_contig12406.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12406.1.1
Unique Nameprot_P-wetherbeei_contig12406.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length264
Homology
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A835ZFT0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT0_9STRA)

HSP 1 Score: 248 bits (634), Expect = 6.210e-79
Identity = 132/246 (53.66%), Postives = 158/246 (64.23%), Query Frame = 0
Query:   33 SPELFVGAINRTITSIFSDYFKK-ETTDRLPPHVMQVLQHALAFLQLREL-MSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSALA-----QGL------VKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPNGQ-YRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRLV 264
            +P LFV  +   +  I S   +  E    LPP +   +     FL L E   ++C VS+ WR + E N LWREPYL RFK H P   LA     Q L      VK  F RRL  P  GDRVEVAWRGKFRLESLEIYNGLAWWLAE+V+   +GQ Y+VHYPGWEARWDE+VPR RLRWGNDR+A QL   R  VGD VE+WCGG +VPGAWLE  V  ++G+R++LG+++  G F V   R RLV
Sbjct:    3 APSLFVYKVEEAVAVITSHLLRSSEPAASLPPGLFLDIAQ---FLTLEERGKAVCCVSRKWRQLGEHNHLWREPYLTRFKFHSPQEDLATHTEAQELAQPGPKVKDLFARRLVRPQVGDRVEVAWRGKFRLESLEIYNGLAWWLAEIVECDADGQRYKVHYPGWEARWDEFVPRERLRWGNDRRAAQLRDERIAVGDMVEIWCGGTNVPGAWLEGRVSSIRGERVFLGDVVAEGFFSVTEERCRLV 245          
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A835ZI68_9STRA (Tudor-knot domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI68_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.330e-70
Identity = 112/200 (56.00%), Postives = 137/200 (68.50%), Query Frame = 0
Query:   75 FLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSALAQGL---------VKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPN-GQYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRLV 264
            FL L EL ++  +S++WR ++E + LWREPY  RFK+ +  S LA G           K  F RRL  P  GDRVEVAWRGKFRLESLE+++GLAWWLA+VV +  +  +Y+VHYPGWE RWDEWV R RLRWGND +A +L G    VGDTVE+WCGGV VPGAWLE  V  ++ DR YLG+ML  G F +   R RLV
Sbjct:    3 FLSLPELGTLARLSKSWRQLSEHDYLWREPYKARFKISD--SLLAAGSDAAVTPPLSCKEAFARRLLHPQVGDRVEVAWRGKFRLESLEVFSGLAWWLADVVARSDDCRRYKVHYPGWEPRWDEWVSRERLRWGNDARAARLLGHPVEVGDTVEVWCGGVHVPGAWLEGRVSCIRSDRAYLGDMLAAGTFSIPLARCRLV 200          
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: W7T606_9STRA (F-box domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T606_9STRA)

HSP 1 Score: 219 bits (557), Expect = 2.180e-65
Identity = 110/249 (44.18%), Postives = 157/249 (63.05%), Query Frame = 0
Query:   21 DFTRTVDEKRESSPELFVGAINRTITSIFSDYFKKETTDRLPPHVMQVLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFK-LHEPPSALAQ-GLVKHH---FQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPNG-QYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRL 263
            D    ++EK++ +P LF+  + R    + +++F K+  ++LP     VL +  +F+ + EL    SV Q W+   ++  +W+  Y++RF  LH P  A    GL   +   F+ RL DP  GD VEVAW+GKFRLES++IY GLAWW A VV+KG NG +Y++HYPGW++RWDEWV R RLRW      +Q   +R    D VE+WC G +VPGAWLEA VR+VKG    +G +L++G  WV+R RVR+
Sbjct:  157 DLEAALNEKKKKNPNLFIPDVRRLSLEVMAEFFDKDRVNKLPS---AVLIYTASFMSISELGMAASVCQQWKETVQSVAVWKPLYIKRFHFLHSPDDASTGIGLPLSYQALFRARLLDPHVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVARDRLRW----TVEQDLNKRIMPNDDVEIWCCGSNVPGAWLEAKVRKVKGQTYCVGRVLSSGALWVNRERVRI 398          
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A4D9D060_9STRA (F-box domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D060_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.130e-64
Identity = 103/241 (42.74%), Postives = 150/241 (62.24%), Query Frame = 0
Query:   21 DFTRTVDEKRESSPELFVGAINRTITSIFSDYFKKETTDRLPPHVMQVLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSALAQGL---VKHH--FQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPNG-QYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFW 255
            D    ++EK++ +  LF+  + R    + +++F K+  ++LP     VL +  +F+ + EL    SV Q W+   ++  +W+  Y++RF     P   + G+   V +H  F+ RL DP  GD VEVAW+GKFRLES++IY GLAWW A VV+KG NG +Y++HYPGW++RWDEWVPR RLRW      +Q   +R    D VE+WC G +VPGAWLEA VR+VKG    +G +L++G  W
Sbjct:   35 DLEAALNEKKKKNSILFIPDVRRLSLEVMAEFFDKDRVNKLPS---AVLIYTASFMSISELGMAASVCQQWKETVQSGAVWKPLYIKRFHFLHSPDDASTGIGLPVSYHALFRARLLDPYVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVPRDRLRW----TVEQDLNKRIMPNDDVEIWCCGSNVPGAWLEAKVRKVKGQTYCVGRVLSSGALW 268          
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: D7FY36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY36_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 1.410e-58
Identity = 108/252 (42.86%), Postives = 135/252 (53.57%), Query Frame = 0
Query:   53 FKKETTDRLPPHVMQVLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSALAQGL---------------------------------------VKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPN-GQYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRLV 264
            FK+E T  LP HV+Q                      ++R  AE + LWRE Y ERF + +  ++ + G                                         K  ++RRL DP  GD V+VAW+GKFRLESLE+Y+G AWWLA VV KG   G Y+VHYPGWE +WDEWV R RLRWGN+  A  L G     GD VE+WC G+ VPGAWLEA V  V+ +R+YLGE+LT+GHFW     VRL+
Sbjct:   59 FKQEVTASLPLHVLQ----------------------DFREAAEGDGLWREAYDERFPVLQSETSESAGQGGPDAGGGGCGPVDCREATATKPTASGRNSSTGDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWEPKWDEWVVRDRLRWGNEHLAAPLKGIPLQAGDAVEVWCKGLHVPGAWLEAVVYEVEKERVYLGEVLTSGHFWARTEHVRLI 288          
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A7S4A403_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A403_9STRA)

HSP 1 Score: 182 bits (463), Expect = 2.690e-52
Identity = 105/252 (41.67%), Postives = 143/252 (56.75%), Query Frame = 0
Query:   41 INRTITSIFSDYFKKETTDRLPPHVMQ------VLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPP-----SALAQGLVKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQK-------GPNGQ----------YRVHYPGWEARWDEWVPRSRLRWG--NDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVR 262
            + R+  S+     +K   +  PP V+        +   L+FL +    ++ +VS++W  ++  + LWR+ YL RF           SA      K  +++RL+DP  GD VEVAWRGKFRLESLEIY G AWW+A VV K       G  G+          Y+V +PGWE RWDEWV R RLRW   N ++A  L  R     D VE+WCG  +VPGAWLEASV++++GD + +G +L+TG  WVDR RVR
Sbjct:   68 LGRSSLSVLPATPRKLFEEEAPPVVVSNTLPRDTMLLCLSFLDVTAHTTLSTVSRDWLSLSSEDALWRDHYLNRFSGGSDEGDGETSADEYEDYKQEYKQRLEDPHVGDDVEVAWRGKFRLESLEIYRGTAWWVAVVVDKVALDAASGSPGRGRKIHAAKAWYKVTFPGWEGRWDEWVSRDRLRWRAKNTQEADALKPR-----DFVEVWCGSQNVPGAWLEASVQKIRGDAVEVGRVLSTGSLWVDRSRVR 314          
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: D8LI95_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI95_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 1.350e-49
Identity = 90/231 (38.96%), Postives = 137/231 (59.31%), Query Frame = 0
Query:   38 VGAINRTITSIFSDYFKKETTDRLPPHVMQVLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSA--LAQGLVKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPNGQYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGH--FWVDRPRVRLV 264
            VG   R++ ++ S    +  T +L     ++L  ++  L + +L  +C V+++WR+ AE + +WR  +  RF+   PP       G +K   + RL+DP+ GD+VEV+W G+FRLESL+++ G +WW A VVQK    +Y++HYPGW++ WDEWV R RLRW  D        R   V + VE+WC G  V GAWL+A VR++K D++ L  +L +     WV R +VR V
Sbjct:    5 VGGCRRSVLNMRSG--TRRATGQLAGLPRELLARSMELLNMVDLGQVCCVNKDWRNAAEEDAVWRFWWARRFREDPPPQRGRARAGHLKQLHRYRLEDPLVGDKVEVSWEGRFRLESLDVFVGRSWWEATVVQKMDGFKYKIHYPGWDSNWDEWVVRDRLRWPVDPSYLSTTFR---VREVVEVWCTGTHVKGAWLQARVRQIKQDQVSLKNVLASSPRTVWVPRSKVRRV 230          
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A8J2SC81_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SC81_9STRA)

HSP 1 Score: 174 bits (441), Expect = 4.370e-49
Identity = 96/242 (39.67%), Postives = 136/242 (56.20%), Query Frame = 0
Query:   45 ITSIFSDYFKKETTDRLPPHVMQVLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSALAQ--GLVKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQK---------GPN--------GQYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGV---GDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRLV 264
            + S+   Y+  +    LP  +++     LA L ++ L ++ +VS+  R  A ++  WR  Y  RF   +  S        ++  F++RL DP PGDRVE+AWRG+FRLE LE+Y GLAWW AEVV+K          P+         +Y+VHY  W+ARWDEWV R +LRW        +   R GV   GD VE+WC G +VPGAWL A V  V+G+   +G++ ++G  WV R RVRL+
Sbjct:   70 LVSLVIHYYPPDRLAGLPRELLE--DAVLANLDVKNLAAMAAVSRAARRAASSDAAWRPQYARRFGAADDASEHFDFGASLRESFRQRLGDPAPGDRVEIAWRGRFRLEGLEVYRGLAWWAAEVVEKRDAXXXXXXAPDCPLDDRRARKYKVHYVHWDARWDEWVARDQLRW-------PVPEGRTGVVASGDDVEVWCSGSAVPGAWLRAVVTAVEGELYCVGDVASSGRLWVRRDRVRLI 302          
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A7S3K1B0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1B0_9STRA)

HSP 1 Score: 153 bits (387), Expect = 9.220e-40
Identity = 92/290 (31.72%), Postives = 130/290 (44.83%), Query Frame = 0
Query:   47 SIFSDYFKKETTDRLPPHVMQVLQHALAFLQLRELMSICSVSQNWRHMAEANCLWREPYLERFKLHEPPSALAQGL-VKHHFQRRLQDPMPGDRVEVAWRGKFRLESLEIYNGLAWWLAEVVQKGPNG-----------------------------------------------------------------------QYRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRLV 264
            S+   ++K +    LP  V  V     AF   ++L  + SVS+ ++ +A+++  W+  Y   F   +       G  +K  + +R++DP  GDRVEVAW+G+FRLE LE+Y GLAWW AEV +K PN                                                                        +YRVHY  W++RWDEWV R +LRW      ++       +GD VE+WC G +VPGAWL A V  V  D   +G + ++GH WV R RVRLV
Sbjct:  125 SMIITFYKGDCLSLLPREV--VCGSIFAFFPPKQLAHLASVSRGFKQLADSDASWQATYDRAFGNSKAGVTYDYGASLKESYHQRIRDPSTGDRVEVAWQGRFRLEGLEVYRGLAWWAAEVAEKRPNDIASNEEDMIPPEQFPPQHIDNQVVPHEQNHEVDLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNTSKRYRVHYLNWDSRWDEWVSREQLRW----PVQEGKNCTIEIGDDVEVWCSGNTVPGAWLRAVVDAVDDDLFCVGNVASSGHLWVSRDRVRLV 408          
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Match: A0A7S2XXB7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXB7_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.200e-26
Identity = 46/89 (51.69%), Postives = 64/89 (71.91%), Query Frame = 0
Query:  175 YRVHYPGWEARWDEWVPRSRLRWGNDRKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLTTGHFWVDRPRVRL 263
            Y++HYPGW+ RWDEWVPR+RLRW       +       V D VE+WC G +VPGAWLEA V+ +KG+++++G+ML++G  WV + RVRL
Sbjct:    1 YKIHYPGWDTRWDEWVPRNRLRWAMHHNPME----NFQVNDRVEVWCTGSNVPGAWLEAQVKAIKGEQIFVGKMLSSGPLWVAKTRVRL 85          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12406.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A835ZFT0_9STRA6.210e-7953.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZI68_9STRA1.330e-7056.00Tudor-knot domain-containing protein n=1 Tax=Tribo... [more]
W7T606_9STRA2.180e-6544.18F-box domain-containing protein n=1 Tax=Nannochlor... [more]
A0A4D9D060_9STRA2.130e-6442.74F-box domain-containing protein n=1 Tax=Nannochlor... [more]
D7FY36_ECTSI1.410e-5842.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4A403_9STRA2.690e-5241.67Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
D8LI95_ECTSI1.350e-4938.96F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A8J2SC81_9STRA4.370e-4939.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3K1B0_9STRA9.220e-4031.72Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2XXB7_9STRA1.200e-2651.69Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF12937F-box-likecoord: 59..106
e-value: 1.0E-5
score: 25.3
NoneNo IPR availableGENE3D1.20.1280.50coord: 42..153
e-value: 8.3E-9
score: 37.3
NoneNo IPR availableGENE3D2.30.30.140coord: 154..197
e-value: 1.8E-10
score: 42.6
IPR025995RNA binding activity-knot of a chromodomainPFAMPF11717Tudor-knotcoord: 161..196
e-value: 4.0E-6
score: 26.6
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 133..202
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 57..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12406contigP-wetherbeei_contig12406:744..1733 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12406.1.1mRNA_P-wetherbeei_contig12406.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12406 744..1733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12406.1.1 ID=prot_P-wetherbeei_contig12406.1.1|Name=mRNA_P-wetherbeei_contig12406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=264bp
MVALDLISNALEAGAVVSLADFTRTVDEKRESSPELFVGAINRTITSIFS
DYFKKETTDRLPPHVMQVLQHALAFLQLRELMSICSVSQNWRHMAEANCL
WREPYLERFKLHEPPSALAQGLVKHHFQRRLQDPMPGDRVEVAWRGKFRL
ESLEIYNGLAWWLAEVVQKGPNGQYRVHYPGWEARWDEWVPRSRLRWGND
RKAKQLAGRRAGVGDTVEMWCGGVSVPGAWLEASVRRVKGDRLYLGEMLT
TGHFWVDRPRVRLV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR025995Tudor-knot
IPR016197Chromo-like_dom_sf
IPR036047F-box-like_dom_sf