prot_P-wetherbeei_contig12313.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12313.1.1
Unique Nameprot_P-wetherbeei_contig12313.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length636
Homology
BLAST of mRNA_P-wetherbeei_contig12313.1.1 vs. uniprot
Match: D8LJG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG5_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 2.090e-89
Identity = 239/643 (37.17%), Postives = 304/643 (47.28%), Query Frame = 0
Query:   12 ELWEYVRQPVRASVLAVLDTLRRNAGRSLTQLFAMPAAAALPAEARDALRVFLCREPVGTMKAEELQICAQLPILPVYPDGL-------------------------------SLPSPGMA-SGDGGXXXXXXXXXXXXXXXXXEYAAASEQRLFLMFDKGILATEPDGSGXXXXXXXXXXXXXXAEALASGDVRRRREGSXXXXXXXXXXXXXXAPAAWTAEHLLTSNFVWLDASDGAEVSLALRMGVTQLNWATFLLQHVLPRLSRLPAGLRDAALGGALIELPHLSQQDARLKMALASLAFLPTVRGSFGPVAASNGRPPGSAGSXXXXXXAMPRLVTPSSLFDPEMEELQGLLPEWRFPKGIFAAPDILAGLRALGLQQTLDWDGLVEVAAAIQEMHESAVAVAS-KGVNGDSGVGEAAAE-RGRRLLLFMDTHAGRLFPGRDTSHVAFFRAVSKMVTGDAAAEEQERRRLDALSRLMALDWVPVYAVPPSPLLPRCDGANEAGLGFAMAGGAEAAVVAAAGPRAAAPAKVRPAEDMWLCSHRYHQLNAEVHSPEVRAAFGWTQSLQPTVVATQAVRLAAHFNHLRGAAEAVAAAALEKXXXXXXXXXXGGMNLEQAKQMLAGVVPRVYQALSAAVEKD 620
            EL+EYVR   R  VLA L T RR+AG+ LT L     AA      RDALR FL REP   M   E+ +C +LPILP++ DGL                               S+P PG   + DGG                  YAAA    L+L+ + G        +G                + A+                        A   W   HLLT +FV +    GAE  L   +G   +  A F ++HV PR+  LP GLRD A+  AL+  P LSQQ  R + ALA L F+PT   S                          +LV P  +FDPE+ EL  LLPE RFP G+F   D+LA LR LGLQ TL W GLVE AA+++ M     A A  +G   + G GE  A  RGR LL ++DTH  RLF  +   +    + ++K+V  DAAA+E+ER RL AL +LMAL WVPV A  PSPL+P   G    G  F+++G  +  VV+        P++VR  EDMW+CS  Y+ L+AEV S  VRAAF W   + P VVA Q + LA  F+  R A EA  A                   LE  +Q +AGVVPR+YQ LS AVE D
Sbjct:  291 ELFEYVRPGTREGVLAALGTARRSAGKPLTDLMRAAGAAE-----RDALREFLAREPASEMSKVEVDVCRELPILPLHEDGLVAARVIARAEIATAAAXXXXXXXXXRNTGSGSVPRPGSGQASDGGT-----------------YAAAKAAPLYLLLETG--------NGFVGVGNKEKDATDVPTSAAT-----------------------EAAQKWLETHLLTPSFVRVRGG-GAEAKLLEVLGARLVGRAAFFVEHVFPRMEELPNGLRDVAMVEALLAAPRLSQQHGRFRTALAELEFVPTTSKS-------------------------KKLVRPHEIFDPEVPELPSLLPESRFPDGVFRHKDVLAALRPLGLQGTLGWGGLVEAAASVEAMRRDGKAGAGGRGPQHEEGGGETEARMRGRALLTYLDTHETRLFELKK-ENAGLLQRMAKIVYVDAAAKERERERLVALHKLMALSWVPVLATFPSPLVPDTGG-GSGGTAFSLSGEDKGGVVS--------PSRVRLREDMWICSRTYYVLDAEVRSSAVRAAFSWNTPVDPVVVARQVIGLAETFSAAREALEAAPAETGGGGDDKTTSPGDNAHTLEGHRQTMAGVVPRLYQILSNAVEAD 844          
BLAST of mRNA_P-wetherbeei_contig12313.1.1 vs. uniprot
Match: A0A6H5K4B9_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4B9_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 2.660e-54
Identity = 172/507 (33.93%), Postives = 224/507 (44.18%), Query Frame = 0
Query:   12 ELWEYVRQPVRASVLAVLDTLRRNAGRSLTQLFAMPAAAALPAEARDALRVFLCREPVGTMKAEELQICAQLPILPVYPDGL-----------------------------SLPSPGMASG---DGGXXXXXXXXXXXXXXXXXEYAAASEQRLFLMFDKGILATEPDGSGXXXXXXXXXXXXXXAEALASGDVRRRREGSXXXXXXXXXXXXXXAPAAWTAEHLLTSNFVWLDASDGAEVSLALRMGVTQLNWATFLLQHVLPRLSRLPAGLRDAALGGALIELPHLSQQDARLKMALASLAFLPTVRGSFGPVAASNGRPPGSAGSXXXXXXAMPRLVTPSSLFDPEMEELQGLLPEWRFPKGIFAAPDILAGLRALGLQQTLDWDGLVEVAAAIQEMHESAVAVAS-KGVNGDSGVGEAAAE---------------------RGRRLLLFMDTHAGRLFPGRDTSHVAFFRAVSKMVTGDAAAEEQERRRLDALSRLMALDWV 464
            EL+EYVR   R  VLA L T RR+AGR LT L    +AA      RDALR FL REP   M   E+ +C +LPILP++ DGL                             S   P + SG   DGG                  YAAA+   L+L+ + G        +G              A + A+   ++                       W   HLLT +FV +    GAE  L   +G   ++ A F ++HV PR+  LP GLRD A+  AL+  P LSQQ  R + ALA L F+PT   +                          +LV P  +FDPE+ EL  LLPE RFP G+F   D+LA LR LGLQ TL W GLVE AA+++ M     A A  +G   + G  E  A                      RGR LL ++DTH  RLF  +   +    + ++K+V  D AA+E+ER RL AL +LMAL WV
Sbjct:  676 ELFEYVRPGTREGVLAALGTARRSAGRPLTDLMRAASAAE-----RDALREFLAREPASEMSKVEVDVCRELPILPLHEDGLVAARAVARAEIAAXXXXXXXXXXXXGNTGSGSVPRLGSGQASDGGT-----------------YAAANASPLYLLLETG--------NGFVGVGNKGQNTTDVATSAATETAQK-----------------------WLETHLLTPSFVRVRGG-GAEAKLLEVLGARLVDRAAFFVEHVFPRIEELPNGLRDVAMVEALLAAPRLSQQHGRFRTALAELEFVPTTSKT-------------------------KKLVRPHEIFDPEVPELPSLLPESRFPDGVFRHKDVLAALRPLGLQGTLGWGGLVEAAASVEAMRRDGTAGAGGRGPQHERGGRETEARXXXXXXXXXXXXXXXXXDARVRGRALLTYLDTHETRLFELKK-ENAGLLQRMAKIVYVDVAAQERERERLVALHKLMALSWV 1102          
BLAST of mRNA_P-wetherbeei_contig12313.1.1 vs. uniprot
Match: A0A835YL62_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA)

HSP 1 Score: 207 bits (528), Expect = 5.810e-53
Identity = 224/660 (33.94%), Postives = 298/660 (45.15%), Query Frame = 0
Query:    3 GSEDVQPPKELWEYVRQPVRASVLAVLDTLRRNAG--RSLTQLFAMPAAAALPAEARDALRVFLCREPVGTMKAEELQICAQLPILPVY--PDGLSLPSPGMASGDGGXXXXXXXXXXXXXXXXXEYAAASEQRLFLMFDKGILATEPDGSGXXXXXXXXXXXXXXAEALASGDVRRRREGSXXXXXXXXXXXXXXAPAAWTAEHLLTSNFVWLDA-SDGAEVSLALRMGVTQLNWATFLLQHVLPRLSRLPAGLRDAALGGALIELPHLSQQDARLKMALASLAFLPTVRGSFGPVAASNGRPPGSAGSXXXXXXAMPRLVTPSSLFDPEMEELQGLLPEWRFPKGIFAAPDILAGLRALGLQQTLDWDGLVEVAAAIQEMHESAVAVASKGVNGDSGV------------------------GEAAAERGRRLLLFMDTHAGRLFPGRDTSHVAFFRAVSKMVTGDAAAEEQERRRLDALSRLMALDWVPVYAVPPSPLLP--RCDGANEAGLGFAMAGGAEAAVVAAAGP------RAAAPAKVRPAEDMWLCSHRYHQLNAEVHSPEVRAAFGWTQSLQPTVVATQAVRLAAHFNHLRGAAEAVAAAALEKXXXXXXXXXXG-------GMNLEQAKQMLAGVVPRVYQALSAAVE 618
            G   V PP  L++YVR+  RA +LA L +  R+A   R  T L +     A P+E RDALR  LCR+P   M  EE  + A LP+ PV+   D L   +   A+G         XXXXXXXXX  EY AA    L+++ + G                          AL++G  +   EG                      EHL T+ F  L++ SD  E+ LA  +G+  L+ A F  +HVL  L +LP  L+ AA    L EL HLSQQD+       ++  + T            GR                 +V   +LFDP   EL  L+P+ +FP G +  PD+LA LR LGLQ  LDW GLV VA +I+E+H +A    + G N  + V                         EAAA+RGR+L+ +MD H   L+P +     A+               E   RRL AL++LMA  WVPV+   PSPLLP  R    +  G                 GP      R A+P+ VRP+ DMW CS  +  L+  V           T+ L P +VA Q  R+A HF  +  +  A AA     XXXXXXXXXX           +E A+QMLAG+VPR+YQ LS A+E
Sbjct:  889 GGAAVTPPPLLFDYVRRGDRAGLLATLGSALRSAASARDYTALLST----AEPSE-RDALRAALCRQPPTEMSREERAVAAALPLWPVHRVSDALQPAASAPAAG------ASVXXXXXXXXXATEYKAAGAP-LYMVLETG----------------------GGPVALSAGG-KAEGEGDEEVLSVLRLVGKD--------EHLFTAIFARLNSDSDVTEIGLARHLGIRPLSRAAFYKEHVLRLLPQLPPTLKAAATVSLLRELSHLSQQDSGFLAHAMNMDLVVT-----------KGR----------------SMVNAKTLFDPSASELLPLMPDDKFPSGAYLLPDVLASLRMLGLQTALDWQGLVSVAKSIEELHATACYACADGANATTAVIVHLSSPRSPSHHPPAARLSAAQDPEAAAKRGRKLIEYMDKHVADLWPKKQKGGAAY----------SVFTAEFNERRLQALAQLMAHKWVPVHVALPSPLLPPHRSQPTHPPG---------------GRGPARPPPSRVASPSAVRPSADMWFCSASFWVLDGAVR----------TKELSPGIVAEQLARMAEHFEAIAPSLAAPAAXXXXXXXXXXXXXXXXVAVPDTTEKGIEAAQQMLAGIVPRLYQFLSDALE 1443          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12313.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJG5_ECTSI2.090e-8937.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4B9_9PHAE2.660e-5433.93UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YL62_9STRA5.810e-5333.94RING-type domain-containing protein n=1 Tax=Tribon... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..193
NoneNo IPR availablePANTHERPTHR15600SACSINcoord: 504..625
coord: 317..479
coord: 8..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12313contigP-wetherbeei_contig12313:104..2011 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12313.1.1mRNA_P-wetherbeei_contig12313.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12313 104..2012 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12313.1.1 ID=prot_P-wetherbeei_contig12313.1.1|Name=mRNA_P-wetherbeei_contig12313.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=636bp
SDGSEDVQPPKELWEYVRQPVRASVLAVLDTLRRNAGRSLTQLFAMPAAA
ALPAEARDALRVFLCREPVGTMKAEELQICAQLPILPVYPDGLSLPSPGM
ASGDGGAGGGSASTGGGAAAPAPEYAAASEQRLFLMFDKGILATEPDGSG
GSSDGGGSDGGGGGAEALASGDVRRRREGSGRGSGGNGRAEAAAAPAAWT
AEHLLTSNFVWLDASDGAEVSLALRMGVTQLNWATFLLQHVLPRLSRLPA
GLRDAALGGALIELPHLSQQDARLKMALASLAFLPTVRGSFGPVAASNGR
PPGSAGSAAAAAAAMPRLVTPSSLFDPEMEELQGLLPEWRFPKGIFAAPD
ILAGLRALGLQQTLDWDGLVEVAAAIQEMHESAVAVASKGVNGDSGVGEA
AAERGRRLLLFMDTHAGRLFPGRDTSHVAFFRAVSKMVTGDAAAEEQERR
RLDALSRLMALDWVPVYAVPPSPLLPRCDGANEAGLGFAMAGGAEAAVVA
AAGPRAAAPAKVRPAEDMWLCSHRYHQLNAEVHSPEVRAAFGWTQSLQPT
VVATQAVRLAAHFNHLRGAAEAVAAAALEKTPSSAAAAAAGGMNLEQAKQ
MLAGVVPRVYQALSAAVEKDAQGEVAARIGAILHAQ
back to top