prot_P-wetherbeei_contig12189.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12189.1.1
Unique Nameprot_P-wetherbeei_contig12189.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length136
Homology
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: A0A835YT38_9STRA (JAB_MPN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT38_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.070e-26
Identity = 68/138 (49.28%), Postives = 86/138 (62.32%), Query Frame = 0
Query:    2 GFALETAQPEQISVEHVVKATPAIAASQIDLHATATGTSLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAM-----EAGGTAAAE--LASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHR 132
             F L+T Q EQI +EHV ++TPA  +S I+ HAT   TSL AL +RL VL  +L AVR G  P DH+LLRQI+ +  +L AM       GG AA    LA +  DALAVT LAA+QKGAA +     KF + H+D+ R
Sbjct:  180 SFQLQTVQAEQIGMEHVARSTPAEGSSAIERHATTMTTSLTALASRLAVLRRYLVAVRGGDVPADHKLLRQITAVTSELRAMGNASGSGGGDAALSEALARDRCDALAVTALAALQKGAAAMDAAAHKFNLAHSDKPR 317          
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: D8LBH4_ECTSI (COP9 signalosome complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH4_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 3.760e-24
Identity = 65/135 (48.15%), Postives = 80/135 (59.26%), Query Frame = 0
Query:    1 MGFALETAQPEQISVEHVVKATPAIAASQIDLHATATGTSLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRRAI 135
            + F LET Q EQISVEHV KATP    S IDLHA A  TSLR L AR+ +L  FL   + G    D+ LLRQIS +  QLP M+ G   + E   E  D+L+V YLA++QK A  + D+ +KF       HRR I
Sbjct:  187 LAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGNISVDYPLLRQISSICNQLPTMD-GAQFSEEFMREFNDSLSVAYLASVQKSAGSMNDLADKFMTAFG--HRRPI 318          
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: A0A7S2B7N9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7N9_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.450e-20
Identity = 55/131 (41.98%), Postives = 79/131 (60.31%), Query Frame = 0
Query:    3 FALETAQPEQISVEHVVKATPAIAASQIDLHATATGTSLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFG-VTHADRHR 132
            F L+T Q E+I++E + KATP    + +DLH  + G SLR L  R   L AFL A ++G  P D+RLLRQ+S +  QLPA++       +  +E+ D L V YLA++ K +A LGD+++K   V    RHR
Sbjct:  180 FQLQTMQAERITMERIAKATPTDGVASLDLHINSLGASLRTLNLRFDALLAFLKATKAGEVPTDYRLLRQVSSICNQLPAVDTAELKG-DFITEYNDMLMVNYLASVTKSSASLGDLIDKHSAVVSHHRHR 309          
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: K3WB84_GLOUD (COP9 signalosome complex subunit 6 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB84_GLOUD)

HSP 1 Score: 81.3 bits (199), Expect = 1.380e-15
Identity = 55/134 (41.04%), Postives = 80/134 (59.70%), Query Frame = 0
Query:    3 FALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRRA 134
            F +ET++ E ISV+H+ K  P   +S+  LH        +++ L  ++ V+  FL A+++G AP DH LLR IS +  QLPAM +    AA L  E+ DAL V+YLA + KGA     +V++F VT  DRH R+
Sbjct:  197 FKVETSETEGISVDHISKIAPIGDSSKSSLHPYLGNVRDAIKMLDRQVDVMVRFLQAMKNGEAPMDHNLLRHISSICNQLPAMTSQSFDAAFL-QEYNDALLVSYLATLTKGATNANTIVDRFTVTQ-DRHSRS 328          
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: M4B700_HYAAE (COP9 signalosome complex subunit 6 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B700_HYAAE)

HSP 1 Score: 80.5 bits (197), Expect = 2.120e-15
Identity = 52/133 (39.10%), Postives = 76/133 (57.14%), Query Frame = 0
Query:    3 FALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRR 133
            F +ET++ E I+++H+ K TP   AS+  LH        +++ L  ++ VL  FL A++SG AP DH LLR IS +  QLPAM++    AA    E  DAL V+YLA + KG   +  VV++F  T    H +
Sbjct:  172 FKIETSETEGIAIDHISKITPIGDASKSSLHPYLGNVRDAVKMLDRQIDVLLCFLQAIKSGEAPMDHNLLRHISSICNQLPAMQSEHFDAA-FTLEFNDALLVSYLATLTKGTTNVNTVVDRFAATQERHHHQ 303          
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: A0A0P1AXN1_PLAHL (COP9 signalosome complex subunit 6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AXN1_PLAHL)

HSP 1 Score: 79.3 bits (194), Expect = 6.470e-15
Identity = 52/133 (39.10%), Postives = 77/133 (57.89%), Query Frame = 0
Query:    3 FALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRR 133
            F +ET++ E I+++H+ K  P    S+  LH        +++ L  ++  L  FL A+++G AP DH LLR IS +  QLPAM++    AA  A E+ DAL V+YLA + KGAA    VV++F  T    H+R
Sbjct:  187 FKIETSETEGIAIDHISKIAPIADGSKSSLHPYLGNVRDAVKMLDRQVDGLLRFLYAMKNGEAPLDHNLLRHISSICNQLPAMKSKRFDAA-FAQEYNDALLVSYLATLTKGAANANTVVDRFATTQERHHQR 318          
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: H3GIZ2_PHYRM (COP9 signalosome complex subunit 6 n=17 Tax=Peronosporaceae TaxID=4777 RepID=H3GIZ2_PHYRM)

HSP 1 Score: 78.2 bits (191), Expect = 1.760e-14
Identity = 51/133 (38.35%), Postives = 76/133 (57.14%), Query Frame = 0
Query:    3 FALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRR 133
            F ++T++ E I+++H+ K  P   AS+  LH        +++ L  ++ VL  FL A++ G AP DH LLR IS +  QLPAM++    AA    E+ DAL V+YLA + KGA     VV++F  T    H+R
Sbjct:  190 FKIDTSEAEGIAIDHISKIAPIGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRFLQAMKDGEAPLDHNLLRHISSICNQLPAMKSEHFDAA-FTQEYNDALLVSYLATLTKGATNANTVVDRFAATQERHHQR 321          
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: A0A662YFC3_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFC3_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.340e-14
Identity = 52/133 (39.10%), Postives = 77/133 (57.89%), Query Frame = 0
Query:    3 FALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRR 133
            F +ET++ E IS++H+ K  P   AS+  LH        +++ L  ++ VL  FL A+++G AP DH LLR IS +  QLPAM++     A    E+ DAL V YLA + KGA     V+++F  T  +RH+R
Sbjct:  126 FKIETSESEGISIDHISKIAPVGDASKSALHPYLGNVRDAVKMLDRQVDVLVRFLQAMKNGEAPMDHNLLRHISSICNQLPAMKSQHFDGA-FTQEYNDALLVAYLATLTKGATNANTVIDRFTATQ-ERHQR 256          
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: D0N0B5_PHYIT (COP9 signalosome complex subunit 6 n=5 Tax=Peronosporaceae TaxID=4777 RepID=D0N0B5_PHYIT)

HSP 1 Score: 77.4 bits (189), Expect = 3.320e-14
Identity = 51/133 (38.35%), Postives = 77/133 (57.89%), Query Frame = 0
Query:    3 FALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRR 133
            F +ET++ E I+++H+ K  P   AS+  LH        +++ L  ++ VL  FL  +++G AP +H LLR IS +  QLPAM++     A  A E+ DAL V+YLAA+ KGA     VV++F  T    H+R
Sbjct:  188 FKIETSETEGIAIDHISKIAPVGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRFLQTMKNGEAPLNHNLLRHISSICNQLPAMKSEHFDTA-FAQEYNDALLVSYLAALTKGATNANTVVDRFTTTQERHHQR 319          
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Match: A0A5D6XJP9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJP9_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.210e-13
Identity = 53/134 (39.55%), Postives = 77/134 (57.46%), Query Frame = 0
Query:    3 FALETAQPEQISVEHVVKATPAIAASQIDLHATATGT--SLRALGARLRVLSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADALAVTYLAAMQKGAALLGDVVEKFGVTHADRHRRA 134
            F +ET++ E ISV+H+ K  P   +S+  LH        +++ L  ++ VL  FL A+++G AP D  LLR IS +  QLPAM +    A+ L  E+ DAL V +LA + KGA     VV++F  T  DRH R+
Sbjct:  183 FKIETSETEGISVDHISKIAPIGDSSKSSLHPYLGNVRDAMKMLDRQVDVLVRFLQAMKNGDAPMDRNLLRHISSVCNQLPAMTSKSFDASFL-QEYNDALLVAFLATLTKGATNANTVVDRFSATQ-DRHSRS 314          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12189.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A835YT38_9STRA1.070e-2649.28JAB_MPN domain-containing protein n=1 Tax=Tribonem... [more]
D8LBH4_ECTSI3.760e-2448.15COP9 signalosome complex subunit 6 n=1 Tax=Ectocar... [more]
A0A7S2B7N9_9STRA1.450e-2041.98COP9 signalosome complex subunit 6 n=1 Tax=Dictyoc... [more]
K3WB84_GLOUD1.380e-1541.04COP9 signalosome complex subunit 6 n=1 Tax=Globisp... [more]
M4B700_HYAAE2.120e-1539.10COP9 signalosome complex subunit 6 n=1 Tax=Hyalope... [more]
A0A0P1AXN1_PLAHL6.470e-1539.10COP9 signalosome complex subunit 6 n=1 Tax=Plasmop... [more]
H3GIZ2_PHYRM1.760e-1438.35COP9 signalosome complex subunit 6 n=17 Tax=Perono... [more]
A0A662YFC3_9STRA2.340e-1439.10COP9 signalosome complex subunit 6 n=1 Tax=Nothoph... [more]
D0N0B5_PHYIT3.320e-1438.35COP9 signalosome complex subunit 6 n=5 Tax=Peronos... [more]
A0A5D6XJP9_9STRA2.210e-1339.55COP9 signalosome complex subunit 6 n=1 Tax=Pythium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024969Rpn11/EIF3F, C-terminalPFAMPF13012MitMem_regcoord: 10..119
e-value: 2.0E-15
score: 57.1
NoneNo IPR availablePANTHERPTHR10540:SF8COP9 SIGNALOSOME COMPLEX SUBUNIT 6coord: 3..130
NoneNo IPR availablePANTHERPTHR10540EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDcoord: 3..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12189contigP-wetherbeei_contig12189:1178..2010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12189.1.1mRNA_P-wetherbeei_contig12189.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12189 1178..2031 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12189.1.1 ID=prot_P-wetherbeei_contig12189.1.1|Name=mRNA_P-wetherbeei_contig12189.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=136bp
MGFALETAQPEQISVEHVVKATPAIAASQIDLHATATGTSLRALGARLRV
LSAFLAAVRSGAAPPDHRLLRQISGLVGQLPAMEAGGTAAAELASEHADA
LAVTYLAAMQKGAALLGDVVEKFGVTHADRHRRAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024969Rpn11/EIF3F_C