prot_P-wetherbeei_contig1218.8.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1218.8.1
Unique Nameprot_P-wetherbeei_contig1218.8.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length149
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A3C0TWV6_9PROT (Transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TWV6_9PROT)

HSP 1 Score: 199 bits (507), Expect = 2.090e-63
Identity = 98/124 (79.03%), Postives = 109/124 (87.90%), Query Frame = 0 
Query:    1 MTPNQAILPITGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRR 124
            M+   AI P  GNE AHAEE+LSR FFALSDP+RR+ILERLRE P LVSELAAPFD+S+QAVS+HIQVLVRAGLV+QSRTGRISTCSLD+GPMF AAVWINRYSHYWQ QFDTLA +L+ I RR
Sbjct:    1 MSTAHAIEPAAGNEAAHAEELLSRVFFALSDPLRRSILERLREQPSLVSELAAPFDVSIQAVSRHIQVLVRAGLVRQSRTGRISTCSLDVGPMFDAAVWINRYSHYWQTQFDTLAHSLEKIARR 124
[Close]
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A5C8PHZ8_9HYPH (Helix-turn-helix transcriptional regulator n=2 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PHZ8_9HYPH)

HSP 1 Score: 166 bits (420), Expect = 3.490e-50
Identity = 85/119 (71.43%), Postives = 99/119 (83.19%), Query Frame = 0 
Query:    6 AILPITGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRR 124
            A+L + G  +  A ++L R FFALSDPVRRAIL+RL E  LLVSELAAPFDISLQAVS+HIQVLVRAGLV+Q RTGRIS CSL +GP+ +AAVWIN YS YWQAQFDTLA AL++I+ R
Sbjct:    6 AMLQVVGGADP-AADLLDRVFFALSDPVRRAILDRLGEEALLVSELAAPFDISLQAVSRHIQVLVRAGLVRQERTGRISRCSLVVGPIQAAAVWINHYSKYWQAQFDTLAAALEEIEER 123
[Close]
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A6G6WSW0_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6WSW0_9HYPH)

HSP 1 Score: 160 bits (405), Expect = 5.340e-48
Identity = 79/111 (71.17%), Postives = 91/111 (81.98%), Query Frame = 0 
Query:   13 NEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDR 123
            N+  +    L + FFALSDPVRRAILERL   P+LVS+LA PF+ISLQAVS+HIQVLVRAGL+ Q RTGRIS CSL IGP++SAAVWINRYS YWQ QFDTLAGAL  I++
Sbjct:   12 NDAVNETASLDQVFFALSDPVRRAILERLDGQPMLVSQLAEPFNISLQAVSRHIQVLVRAGLIAQERTGRISRCSLTIGPIYSAAVWINRYSKYWQEQFDTLAGALDGIEK 122
[Close]
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A370K8G9_9GAMM (ArsR family transcriptional regulator n=2 Tax=Dyella solisilvae TaxID=1920168 RepID=A0A370K8G9_9GAMM)

HSP 1 Score: 160 bits (405), Expect = 7.540e-48
Identity = 83/122 (68.03%), Postives = 90/122 (73.77%), Query Frame = 0 
Query:    3 PNQAILPITGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRR 124
            P   ++  TG +   A+  L + FFALSDPVRR ILERL    LLVSELAA FDISLQAVS+HIQVLVR GLVQQ RTGRIS CSLD GPM  AAVW+NRYS YWQ QFD LA  L DID R
Sbjct:    5 PTLRVVDHTGQDPDLAQARLDQVFFALSDPVRREILERLDGQALLVSELAASFDISLQAVSRHIQVLVRTGLVQQERTGRISRCSLDAGPMLEAAVWMNRYSKYWQQQFDLLAATLADIDER 126
[Close]
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A1I2FX14_9GAMM (DNA-binding transcriptional regulator, ArsR family n=5 Tax=Rhodanobacteraceae TaxID=1775411 RepID=A0A1I2FX14_9GAMM)

HSP 1 Score: 160 bits (405), Expect = 7.540e-48
Identity = 88/132 (66.67%), Postives = 95/132 (71.97%), Query Frame = 0 
Query:   11 TGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRRNI-----PPRKSHGKPKP 137
            TG     A+E L++ FFALSDPVRR ILERL    LLVSELAA FDISLQAVS+HIQVLVR GL+QQ RTGRIS CSLD GPM  AAVWINRYS YWQ QFD LA  L DID R       P RK+  K +P
Sbjct:   14 TGQNPELAQERLNQVFFALSDPVRRDILERLDGQVLLVSELAAAFDISLQAVSRHIQVLVRTGLIQQERTGRISRCSLDAGPMLEAAVWINRYSKYWQQQFDLLAVTLADIDERRAASPSKPARKAAKKRRP 145
[Close]
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A534IA97_9GAMM (Helix-turn-helix transcriptional regulator n=8 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534IA97_9GAMM)

HSP 1 Score: 160 bits (404), Expect = 1.100e-47
Identity = 79/115 (68.70%), Postives = 90/115 (78.26%), Query Frame = 0 
Query:   12 GNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRRNI 126
            G +   A++ L R FFALSDPVRR ILERL    LLVSELAAP++ISLQAVS+HIQVLVRAGL+QQ RTGRIS CSLD GP+  AAVW+NRYS YWQ QFD LA  L +ID R +
Sbjct:   15 GPDPDFAQDRLDRVFFALSDPVRRQILERLDGQALLVSELAAPYEISLQAVSRHIQVLVRAGLIQQERTGRISRCSLDAGPLLDAAVWMNRYSKYWQQQFDVLAATLSEIDERRM 129
[Close]
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A370X7R8_9GAMM (ArsR family transcriptional regulator n=2 Tax=Dyella psychrodurans TaxID=1927960 RepID=A0A370X7R8_9GAMM)

HSP 1 Score: 159 bits (402), Expect = 2.150e-47
Identity = 88/138 (63.77%), Postives = 95/138 (68.84%), Query Frame = 0 
Query:    1 MTPNQAILPI--TGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRRNIPPRKSHGKPK 136
            MT  Q +  +   G +   A+  L + FFALSDPVRR ILERL    LLVSELAA FDISLQAVS+HIQVLVR GLVQQ RTGRIS CSLD GPM  AAVW+NRYS YWQ QFD LA  L DID R     KS   PK
Sbjct:    1 MTIRQTLRAVGEAGLDPDAAQAQLDQVFFALSDPVRREILERLDGQALLVSELAAAFDISLQAVSRHIQVLVRTGLVQQERTGRISRCSLDAGPMLDAAVWMNRYSKYWQQQFDMLAATLADIDERKAKQPKSAQSPK 138
[Close]
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A328P7M0_9GAMM (HTH arsR-type domain-containing protein n=3 Tax=Dyella TaxID=231454 RepID=A0A328P7M0_9GAMM)

HSP 1 Score: 156 bits (394), Expect = 3.650e-46
Identity = 80/122 (65.57%), Postives = 92/122 (75.41%), Query Frame = 0 
Query:    3 PNQAILPITGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRR 124
            P QA+   TG +   A+  L + FFALSDP+RR ILE+L    LLVSE+AA FD+SLQAVS+HIQVLVRAGL+QQ RTGRIS CSLD GP+  AAVW+NRYS YWQ QFD LA  L DID R
Sbjct:    7 PLQAVTD-TGFDPELAQSRLDQVFFALSDPIRRQILEQLDGQALLVSEIAAAFDVSLQAVSRHIQVLVRAGLIQQERTGRISRCSLDAGPLLDAAVWMNRYSKYWQQQFDLLAATLADIDER 127
[Close]
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: UPI001F34D575 (metalloregulator ArsR/SmtB family transcription factor n=1 Tax=Dyella sp. 2HG41-7 TaxID=2883239 RepID=UPI001F34D575)

HSP 1 Score: 156 bits (394), Expect = 3.650e-46
Identity = 79/109 (72.48%), Postives = 84/109 (77.06%), Query Frame = 0 
Query:   18 AEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRRNI 126
            A+  L   FFALSDPVRR ILERL    LLVSELAA FDISLQAVS+HIQVLVR GL+QQ RTGRIS CSLD GPM  AAVW+NRYS YWQ QFD LA  L DID R +
Sbjct:   21 AQARLDEVFFALSDPVRRQILERLDGQALLVSELAASFDISLQAVSRHIQVLVRTGLIQQERTGRISRCSLDAGPMLDAAVWMNRYSKYWQQQFDLLAATLADIDERKM 129
[Close]
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Match: A0A370WYW6_9GAMM (ArsR family transcriptional regulator n=2 Tax=Dyella monticola TaxID=1927958 RepID=A0A370WYW6_9GAMM)

HSP 1 Score: 155 bits (392), Expect = 7.110e-46
Identity = 82/128 (64.06%), Postives = 92/128 (71.88%), Query Frame = 0 
Query:    1 MTPNQAILPIT--GNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSELAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWINRYSHYWQAQFDTLAGALQDIDRRNI 126
            MT   A+  ++  G +   A+  L   FFALSDPVRR ILE+L    LLVSELAA FDISLQAVS+HIQVLVR GL+QQ RTGRIS CSLD GPM  AAVW+NRYS YWQ QFD LA  L DID R +
Sbjct:    1 MTIGHALRAVSESGLDPDRAQARLDEVFFALSDPVRRQILEQLDGQALLVSELAASFDISLQAVSRHIQVLVRTGLIQQERTGRISRCSLDAGPMLEAAVWMNRYSKYWQQQFDILAATLADIDDRRL 128
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1218.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TWV6_9PROT2.090e-6379.03Transcriptional regulator n=1 Tax=Alphaproteobacte... [more]
A0A5C8PHZ8_9HYPH3.490e-5071.43Helix-turn-helix transcriptional regulator n=2 Tax... [more]
A0A6G6WSW0_9HYPH5.340e-4871.17Helix-turn-helix transcriptional regulator n=1 Tax... [more]
A0A370K8G9_9GAMM7.540e-4868.03ArsR family transcriptional regulator n=2 Tax=Dyel... [more]
A0A1I2FX14_9GAMM7.540e-4866.67DNA-binding transcriptional regulator, ArsR family... [more]
A0A534IA97_9GAMM1.100e-4768.70Helix-turn-helix transcriptional regulator n=8 Tax... [more]
A0A370X7R8_9GAMM2.150e-4763.77ArsR family transcriptional regulator n=2 Tax=Dyel... [more]
A0A328P7M0_9GAMM3.650e-4665.57HTH arsR-type domain-containing protein n=3 Tax=Dy... [more]
UPI001F34D5753.650e-4672.48metalloregulator ArsR/SmtB family transcription fa... [more]
A0A370WYW6_9GAMM7.110e-4664.06ArsR family transcriptional regulator n=2 Tax=Dyel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001845HTH ArsR-type DNA-binding domainPRINTSPR00778HTHARSRcoord: 26..41
score: 42.08
coord: 58..73
score: 33.54
coord: 73..88
score: 27.71
IPR001845HTH ArsR-type DNA-binding domainSMARTSM00418arsrmega2coord: 24..102
e-value: 4.4E-9
score: 46.2
IPR001845HTH ArsR-type DNA-binding domainPROSITEPS50987HTH_ARSR_2coord: 14..110
score: 13.346346
NoneNo IPR availablePFAMPF12840HTH_20coord: 25..82
e-value: 9.3E-17
score: 60.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..148
NoneNo IPR availablePANTHERPTHR38600:SF2TRANSCRIPTIONAL REGULATORY PROTEINcoord: 16..131
NoneNo IPR availablePANTHERPTHR38600TRANSCRIPTIONAL REGULATORY PROTEINcoord: 16..131
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 15..124
e-value: 5.1E-24
score: 86.2
IPR011991ArsR-like helix-turn-helix domainCDDcd00090HTH_ARSRcoord: 26..82
e-value: 1.44546E-16
score: 67.7089
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 22..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1218contigP-wetherbeei_contig1218:6771..7217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1218.8.1mRNA_P-wetherbeei_contig1218.8.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1218 6771..7217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1218.8.1 ID=prot_P-wetherbeei_contig1218.8.1|Name=mRNA_P-wetherbeei_contig1218.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp
MTPNQAILPITGNEEAHAEEMLSRAFFALSDPVRRAILERLREAPLLVSE
LAAPFDISLQAVSKHIQVLVRAGLVQQSRTGRISTCSLDIGPMFSAAVWI
NRYSHYWQAQFDTLAGALQDIDRRNIPPRKSHGKPKPKTRKDRPAAQK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001845HTH_ArsR_DNA-bd_dom
IPR036388WH-like_DNA-bd_sf
IPR011991ArsR-like_HTH
IPR036390WH_DNA-bd_sf