prot_P-wetherbeei_contig12156.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12156.2.1
Unique Nameprot_P-wetherbeei_contig12156.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length188
Homology
BLAST of mRNA_P-wetherbeei_contig12156.2.1 vs. uniprot
Match: D7FP98_ECTSI (Flagellar radial spoke protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP98_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.170e-19
Identity = 84/190 (44.21%), Postives = 107/190 (56.32%), Query Frame = 0
Query:    1 MSAFLVESEHRAARPAVREACSQSDAFKPRPPSPPFQPRCTGTDA--EAQVGDDLFDFDAEIEPLLDVLVSKTLEQAHVEAEREGEMAALVAVSAAAAAARCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGSQQLARQLWPSVLEGACSALRAGDAWVEPAARQIEAVFWPWLMDRV 188
            +S +LVE    AARP  REA +Q+D F+ RP +P F P+ TG DA  + +V D LFDF+AE++P+L VLV KTLEQA +E ERE E+  +   + A    R EE                XXXXXXXXXXXXX        K    QL RQ+ P  L+ A   L A  +W   + +QI+ VF PWL  RV
Sbjct:  119 LSRYLVEPGDTAARPE-READTQTDDFQERPQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKTLEQARMEVEREHELLCIREAATALVHQRAEEVQQVLELKQAAVEAEKXXXXXXXXXXXXXNRRRLAKEKVACLQLVRQVLPLSLDRAFEQLSA-KSWETQSVQQIKKVFLPWLFGRV 306          
BLAST of mRNA_P-wetherbeei_contig12156.2.1 vs. uniprot
Match: F0Y5T0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5T0_AURAN)

HSP 1 Score: 86.3 bits (212), Expect = 1.410e-16
Identity = 67/189 (35.45%), Postives = 89/189 (47.09%), Query Frame = 0
Query:    1 MSAFLVESEHRAARPAVREACSQSDAFKPRPPSPPFQPRCTGTDAEAQVGDDL-FDFDAEIEPLLDVLVSKTLEQAHVEAEREGEMAALVAVSAAAAAARCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGSQQLARQLWPSVLEGACSALRAGDAWVEPAARQIEAVFWPWLMDRV 188
            ++ +LVE E+  A  AV EA +Q+D F  +PP  PF P  TG DA   + DD  F F+ E++PLL VLVSKTLEQA +E E+E E+AA+    +   A +  E                                     K  S +L  QL P + EGA        +WVEP   +I+A   PWL  RV
Sbjct:  112 LTPYLVEKEY--ASSAVEEA-AQTDGFLEQPPPAPFAPPKTGVDASTSMEDDQPFVFNNEVQPLLAVLVSKTLEQAMLEVEQEEELAAIADDMSDKLARQAAEKARVEAMEQAEVDREKAKLGDFESARAALVEEQTLARKVASSRLVDQLLPEIFEGAYRHFEDRGSWVEPVLHEIKATTLPWLYARV 297          
BLAST of mRNA_P-wetherbeei_contig12156.2.1 vs. uniprot
Match: A0A835YQI5_9STRA (Radial spoke protein 3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQI5_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.210e-16
Identity = 73/171 (42.69%), Postives = 91/171 (53.22%), Query Frame = 0
Query:   19 EACSQSDAFKPRPPSPPFQPRCTGTDAEAQV-GDDLFDFDAEIEPLLDVLVSKTLEQAHVEAEREGEMAALVAVSAAAAAARCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGSQQLARQLWPSVLEGACSALRAGDAWVEPAARQIEAVFWPWLMDRV 188
            ++ +Q+D F  +P    ++    G DA  +V   +LFDFD EI+PLLDVL+ KTLEQA +E ER  E+  +   +    A R  E              XXXXXXXXXXXXXX         K  +  + RQ WP VL GAC ALRA   W EP A  I   F PWL+D V
Sbjct:  152 DSVTQTDEFAEKPDEVYYKQPLGGADAATEVINTELFDFDREIKPLLDVLIGKTLEQAKLEVERSWELQQIAQATDRFNAERVAEARAQEQLEAAAIERXXXXXXXXXXXXXXALSRWQATQKVAAVCMMRQCWPGVLRGACEALRAAGRWCEPRAIDIADEFMPWLLDSV 322          
BLAST of mRNA_P-wetherbeei_contig12156.2.1 vs. uniprot
Match: A0A8B9GLA9_9PSIT (Radial spoke head 3 n=1 Tax=Amazona collaria TaxID=241587 RepID=A0A8B9GLA9_9PSIT)

HSP 1 Score: 78.2 bits (191), Expect = 6.670e-14
Identity = 68/166 (40.96%), Postives = 86/166 (51.81%), Query Frame = 0
Query:   23 QSDAFKPRPPSPPFQPRCTGTDAEAQVGDDLFDFDAEIEPLLDVLVSKTLEQAHVEAEREGEMAALVAVSAAAAAARCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGSQQLARQLWPSVLEGACSALRAGDAWVEPAARQIEAVFWPWLMDRV 188
            Q+DAF  RPPSP F P  TG D   Q+  +LFDFD E++P+L+VL+ KT+EQA +E   E E+A L A   A A  R  E              XXXXXXXXXXXX           K  +Q  A+     ++    + LR G  + +P  R IE  F PWLM  V
Sbjct:   38 QTDAFLDRPPSPFFIPAKTGKDVATQLAGELFDFDIEVKPILEVLIGKTVEQALLEVMEEEELAQLWAHQRAYAELRNAELAEVQRLEEQDRRYXXXXXXXXXXXXQMLKKQKETAEKIAAQAFAKHYLADLIPSVFNNLREGGFFYDPIERDIETEFLPWLMTEV 203          
BLAST of mRNA_P-wetherbeei_contig12156.2.1 vs. uniprot
Match: UPI001F5EBF31 (radial spoke head protein 3 homolog n=1 Tax=Schistocerca piceifrons TaxID=274613 RepID=UPI001F5EBF31)

HSP 1 Score: 78.6 bits (192), Expect = 8.810e-14
Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 0
Query:   14 RPAVREACSQSDAFKPRPPSPPFQPRCTGTDAEAQV-GDDLFDFDAEIEPLLDVLVSKTLEQAHVEAEREGEMAAL 88
            RP   +AC Q+D F  RPP+PP+ P  TG D E Q+   DLFDFD E+EP+L+VLV KT+EQA +E   E EMAA+
Sbjct:  128 RPLEEDACCQTDLFLDRPPTPPYVPAKTGLDQETQIYPGDLFDFDLEVEPILEVLVGKTIEQAMIEVLSEEEMAAM 203          
BLAST of mRNA_P-wetherbeei_contig12156.2.1 vs. uniprot
Match: A0A672UCZ0_STRHB (Radial spoke head 3 n=6 Tax=Psittaciformes TaxID=9223 RepID=A0A672UCZ0_STRHB)

HSP 1 Score: 78.6 bits (192), Expect = 1.070e-13
Identity = 68/166 (40.96%), Postives = 86/166 (51.81%), Query Frame = 0
Query:   23 QSDAFKPRPPSPPFQPRCTGTDAEAQVGDDLFDFDAEIEPLLDVLVSKTLEQAHVEAEREGEMAALVAVSAAAAAARCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGSQQLARQLWPSVLEGACSALRAGDAWVEPAARQIEAVFWPWLMDRV 188
            Q+DAF  RPPSP F P  TG D   Q+  +LFDFD E++P+L+VL+ KT+EQA +E   E E+A L A   A A  R  E              XXXXXXXXXXXX           K  +Q  A+     ++    + LR G  + +P  R IE  F PWLM  V
Sbjct:  171 QTDAFLDRPPSPFFVPAKTGKDVATQLAGELFDFDIEVKPILEVLIGKTVEQALLEVMEEEELAQLWAHQRAYAELRNAELAEVQRLEEQDRRYXXXXXXXXXXXXQMLKKQKETAEKIAAQAFAKHYLADLIPSVFNNLREGGFFYDPIERDIETEFLPWLMTEV 336          
BLAST of mRNA_P-wetherbeei_contig12156.2.1 vs. uniprot
Match: UPI001F5023D2 (radial spoke head protein 3 homolog n=1 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F5023D2)

HSP 1 Score: 78.6 bits (192), Expect = 1.270e-13
Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 0
Query:   14 RPAVREACSQSDAFKPRPPSPPFQPRCTGTDAEAQV-GDDLFDFDAEIEPLLDVLVSKTLEQAHVEAEREGEMAAL 88
            RP   +AC Q+D F  RPP+PP+ P  TG D E Q+   DLFDFD E+EP+L+VLV KT+EQA +E   E EMAA+
Sbjct:  421 RPLEEDACCQTDLFLDRPPTPPYVPAKTGLDQETQIYPGDLFDFDLEVEPILEVLVGKTIEQAMIEVLSEEEMAAM 496          
BLAST of mRNA_P-wetherbeei_contig12156.2.1 vs. uniprot
Match: A0A8C5PNK0_9ANUR (Radial spoke head 3 n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5PNK0_9ANUR)

HSP 1 Score: 77.4 bits (189), Expect = 1.910e-13
Identity = 85/167 (50.90%), Postives = 106/167 (63.47%), Query Frame = 0
Query:   23 QSDAFKPRPPSPPFQPRCTGTDAEAQVGD-DLFDFDAEIEPLLDVLVSKTLEQAHVEAEREGEMAALVAVSAAAAAARCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGSQQLARQLWPSVLEGACSALRAGDAWVEPAARQIEAVFWPWLMDRV 188
            Q+DAF  RPP+P F P  TG D   Q+ D +LFDFD E++P+L+VLV KT+EQA +E   E E+AAL     A    R  E  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX      K  ++  A+Q    ++    S+LR    + +P  R +E VF PWLM+ V
Sbjct:  133 QTDAFLDRPPTPLFIPAKTGVDIATQILDGELFDFDLEVKPMLEVLVGKTIEQALLEVMEEEELAALREQQRAFEELRDAELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKETAEKVAARAFAQQYLADLVPSVFSSLRDNGYFYDPVERDVETVFMPWLMEEV 299          
BLAST of mRNA_P-wetherbeei_contig12156.2.1 vs. uniprot
Match: A0A8C6J1W9_MELUD (Radial spoke head 3 n=2 Tax=Melopsittacus undulatus TaxID=13146 RepID=A0A8C6J1W9_MELUD)

HSP 1 Score: 77.0 bits (188), Expect = 3.510e-13
Identity = 70/166 (42.17%), Postives = 87/166 (52.41%), Query Frame = 0
Query:   23 QSDAFKPRPPSPPFQPRCTGTDAEAQVGDDLFDFDAEIEPLLDVLVSKTLEQAHVEAEREGEMAALVAVSAAAAAARCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGSQQLARQLWPSVLEGACSALRAGDAWVEPAARQIEAVFWPWLMDRV 188
            Q+DAF  RPPSP F P  TG D   Q+  +LFDFD E++P+L+VLV KT+EQA +E   E E+A L A   A A  R  E            XXXXXXXXXXXXXX           K  +Q   +     ++    + LR G  + +P  R IE  F PWLM  V
Sbjct:  136 QTDAFLDRPPSPFFIPAKTGKDVATQLAGELFDFDIEVKPILEVLVGKTVEQALLEVMEEEELAQLWAHQRAYAELRNAELAEVQRLEEEDRXXXXXXXXXXXXXXQMLKKQKETAEKIAAQAFTKHYLADLIPSVFNNLREGGFFYDPIERDIETEFLPWLMTEV 301          
BLAST of mRNA_P-wetherbeei_contig12156.2.1 vs. uniprot
Match: A0A3B3BE54_ORYME (Radial spoke head 3 n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A3B3BE54_ORYME)

HSP 1 Score: 75.9 bits (185), Expect = 4.540e-13
Identity = 67/175 (38.29%), Postives = 91/175 (52.00%), Query Frame = 0
Query:   15 PAVREACSQSDAFKPRPPSPPFQPRCTGTDAEAQVGD-DLFDFDAEIEPLLDVLVSKTLEQAHVEAEREGEMAALVAVSAAAAAARCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAGSQQLARQLWPSVLEGACSALRAGDAWVEPAARQIEAVFWPWLMDRV 188
            P V+E   Q+DAF  RP +P F P  TG DAE Q+ + DLFDF+ E+ P+L++LV KTLEQ+ +E   E E+AAL+A   A    R  +           XXXXXXX                   +A +QQ    L PSVL    ++LR    + +P  R +E  F+P LM+ V
Sbjct:  104 PVVKEIECQTDAFLDRPETPIFIPAKTGKDAETQIDEGDLFDFEEEVRPILEILVGKTLEQSLLEVMEEEELAALMAQQRAFLERRNNQLPEVHRLQEQEXXXXXXXVKQKRALQEEKEVAEKIAARALTQQQLADLVPSVL----ASLRREGYFYDPVERDVETHFFPRLMEDV 274          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12156.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP98_ECTSI1.170e-1944.21Flagellar radial spoke protein n=1 Tax=Ectocarpus ... [more]
F0Y5T0_AURAN1.410e-1635.45Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A835YQI5_9STRA2.210e-1642.69Radial spoke protein 3-domain-containing protein n... [more]
A0A8B9GLA9_9PSIT6.670e-1440.96Radial spoke head 3 n=1 Tax=Amazona collaria TaxID... [more]
UPI001F5EBF318.810e-1455.26radial spoke head protein 3 homolog n=1 Tax=Schist... [more]
A0A672UCZ0_STRHB1.070e-1340.96Radial spoke head 3 n=6 Tax=Psittaciformes TaxID=9... [more]
UPI001F5023D21.270e-1355.26radial spoke head protein 3 homolog n=1 Tax=Schist... [more]
A0A8C5PNK0_9ANUR1.910e-1350.90Radial spoke head 3 n=1 Tax=Leptobrachium leishane... [more]
A0A8C6J1W9_MELUD3.510e-1342.17Radial spoke head 3 n=2 Tax=Melopsittacus undulatu... [more]
A0A3B3BE54_ORYME4.540e-1338.29Radial spoke head 3 n=1 Tax=Oryzias melastigma Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..44
IPR009290Radial spoke 3PFAMPF06098Radial_spoke_3coord: 12..188
e-value: 2.8E-36
score: 125.2
IPR009290Radial spoke 3PANTHERPTHR21648FLAGELLAR RADIAL SPOKE PROTEIN 3coord: 11..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12156contigP-wetherbeei_contig12156:1390..1953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12156.2.1mRNA_P-wetherbeei_contig12156.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12156 1390..1959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12156.2.1 ID=prot_P-wetherbeei_contig12156.2.1|Name=mRNA_P-wetherbeei_contig12156.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp
MSAFLVESEHRAARPAVREACSQSDAFKPRPPSPPFQPRCTGTDAEAQVG
DDLFDFDAEIEPLLDVLVSKTLEQAHVEAEREGEMAALVAVSAAAAAARC
EEAAAVATAEAVALATARERRVAQRAQRREAEARARLLAKAGSQQLARQL
WPSVLEGACSALRAGDAWVEPAARQIEAVFWPWLMDRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009290Radial_spoke_3