prot_P-wetherbeei_contig12059.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12059.2.1
Unique Nameprot_P-wetherbeei_contig12059.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length303
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig12059.2.1 vs. uniprot
Match: A0A349B030_9ACTN (FtsX_ECD domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B030_9ACTN)

HSP 1 Score: 158 bits (399), Expect = 4.590e-41
Identity = 103/245 (42.04%), Postives = 132/245 (53.88%), Query Frame = 0 
Query:   71 SGSWAGARTAGDGTILMVLVVGGHPYEAGDACTVEYEPSVVETADAVELTIRGWRPPG-------DVGCDDLGYGRAMTLRLEQPLGTRPLVFLGEPR---PVFDGSALATPTYLPDGWIAGPEGPGYPDPQSAITWSRRWGPLPLPNSADRCTPSDSGIMLNEGPLGSLDGYPHEMGEIDEGTYDVNGATAVW--STMLDHGTVRLTWSTGTRAFMLQSLPACQGDVPPSLDTMLQIARGLVEP 303
            SG   G RT+ DG  L+V  VGG PY  G ACTV Y   V E+A   E+T++ +   G       +V C   GY R++ + L+ PLG R  V   E R    VFDGS LA PT +P+GW    E  G+PDP+SA  W R WG  P P++ D CTPSDS I L +GP    D     +  +   TYDVNGA A +        G V L W T  ++F+L S P+C G+   SLD +L+ AR L  P
Sbjct:  252 SGGLTGTRTSPDGRSLVVTFVGGAPYTPGKACTVAYRAEVTESAG--EVTVQLFSVGGGATADSENVVCTLEGYFRSVEVGLDAPLGDR-TVHEKESRRRLEVFDGSLLAEPTLMPEGWTLLSEQAGFPDPESAAYWQRTWGAEPPPSTGDSCTPSDSPISLTQGPAAGPDRDVSYLRPVS--TYDVNGAPATYYEGGPTTPGQVALIWETAGQSFVLDSGPSCFGEGAASLDRLLKFARALAVP 491
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12059.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A349B030_9ACTN4.590e-4142.04FtsX_ECD domain-containing protein n=1 Tax=Acidimi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12059contigP-wetherbeei_contig12059:809..1717 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12059.2.1mRNA_P-wetherbeei_contig12059.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12059 809..1717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12059.2.1 ID=prot_P-wetherbeei_contig12059.2.1|Name=mRNA_P-wetherbeei_contig12059.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=303bp
WPVLVGAAAAAAVIVAVIVVRSSDSDRSKGIVAATSPSVISTPDDTVSTT
TTPAGDQPPHPGDVLGRPLVSGSWAGARTAGDGTILMVLVVGGHPYEAGD
ACTVEYEPSVVETADAVELTIRGWRPPGDVGCDDLGYGRAMTLRLEQPLG
TRPLVFLGEPRPVFDGSALATPTYLPDGWIAGPEGPGYPDPQSAITWSRR
WGPLPLPNSADRCTPSDSGIMLNEGPLGSLDGYPHEMGEIDEGTYDVNGA
TAVWSTMLDHGTVRLTWSTGTRAFMLQSLPACQGDVPPSLDTMLQIARGL
VEP
back to top