prot_P-wetherbeei_contig1185.5.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1185.5.1
Unique Nameprot_P-wetherbeei_contig1185.5.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length201
Homology
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: D8LJN0_ECTSI (Serine/Threonine Dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN0_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 9.650e-77
Identity = 130/187 (69.52%), Postives = 151/187 (80.75%), Query Frame = 0
Query:   13 LVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRAMPE-LERVGVILCGGNVDAAQLGALLS 198
            L+HP +DP V  GQGTVGLELV+QV E T G  LDAVVVPVGGGGL++GVA AVKALCPG  ++GAEP+ A DAFRSK +G + GH+  G  PDTIADGL+TTLG  TWPVVRD VD I+TVSE+EIR WMRVVYERMKLVIEPS+AVGVA +MSP  R MP+ ++RVGV+LCGGNVD   L  LL+
Sbjct:  155 LIHPYNDPRVQCGQGTVGLELVQQVKEQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEG-MPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAALMSPRVRGMPQDVKRVGVVLCGGNVDVTLLQDLLA 340          
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: D7FHM2_ECTSI (Serine Racemase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHM2_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 6.790e-71
Identity = 124/201 (61.69%), Postives = 150/201 (74.63%), Query Frame = 0
Query:    1 AADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRAMP-ELERVGVILCGGNVDAAQLGALLSEA 200
            AAD +    G+ L+H S+D  V  G GT+GLELV QV ++T G  LDAV+V +GGGGL+SGV  AVKALCP A I+GA+P  A DAF+SK +G +C      A PDTIADGL+T+LG   WPVVRD VD I+TVSED+IR WM VVY+RMKLVIEPS+AVGVA +MSP+ RAMP E+ +VGV+LCGGNVD   L  LLS A
Sbjct:  164 AADIVSKLPGSSLIHSSNDARVQCGIGTIGLELVSQVKDLTGGADLDAVIVTIGGGGLISGVTTAVKALCPNARIIGAQPEKAADAFKSKQSGTLCSPAEGEALPDTIADGLRTSLGNKAWPVVRDSVDEIVTVSEDDIRVWMGVVYKRMKLVIEPSAAVGVAALMSPQVRAMPSEMRKVGVVLCGGNVDVTLLQDLLSVA 364          
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: A0A835Z2N3_9STRA (Serine/Threonine dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2N3_9STRA)

HSP 1 Score: 219 bits (558), Expect = 7.980e-66
Identity = 135/245 (55.10%), Postives = 157/245 (64.08%), Query Frame = 0
Query:    2 ADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSK-----------AAGKVC--------------------GHEPA---GAA--------------PDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRAMPELERVGVILCGGNVDAAQLGALLS 198
            A  LV E  A LVH S+DP VI GQGTVGLELV QV EM  G  LDAV+VPVGGGGLL+GVA+AV+ALCP AL++GAEP+AADDA RSK           A   +C                    G +P+   GAA              PDT+ADGL+T LG  TWPVVRD VD I+TVSEDEIR  +R+VYER+KL IEPS+AVGVA  +S    AMP L R+GV+LCGGNVD AQL  LL+
Sbjct:  257 AAALVREHDAVLVHSSNDPRVIDGQGTVGLELVEQVREMCGGADLDAVIVPVGGGGLLAGVAVAVRALCPRALVIGAEPSAADDAARSKVRFCCGVYCAYAGSAMCLEVLVRRFRSVSEVRCALAIGAQPSAADGAARSKAAGMLLEHDTLPDTLADGLRTVLGSWTWPVVRDQVDCIVTVSEDEIRASLRLVYERLKLAIEPSAAVGVAAALSDAVAAMPGLRRIGVVLCGGNVDMAQLARLLA 501          
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: L8GDL9_ACACA (Serine/threonine dehydratase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GDL9_ACACA)

HSP 1 Score: 195 bits (496), Expect = 1.330e-59
Identity = 109/189 (57.67%), Postives = 138/189 (73.02%), Query Frame = 0
Query:    2 ADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFR-AMPELERVGVILCGGNVD 189
            ADR+VAE GA  +HP ++PDVIAGQ T+ LE + QVA+      LDA++ PVGGGG++SGVAIA KAL PG  + GAEP  ADDA+RSK AG++           TIADGL+T LG  TWPVVRD+VD I TVSE+EI+  MR+V+ERMKLV+EPS AV +A V+S +FR A P++ R+ V+  GGNVD
Sbjct:   53 ADRIVAETGAVFIHPYNNPDVIAGQATIALEALEQVAD------LDAIITPVGGGGMMSGVAIAAKALKPGIKVFGAEPKDADDAYRSKEAGELLPQT----GTSTIADGLRTGLGSLTWPVVRDLVDAIYTVSEEEIKAAMRLVWERMKLVVEPSGAVSLAAVLSEDFRKANPDVRRICVVFSGGNVD 231          
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: A0A0F6VZC4_9DELT (Threonine dehydratase, catabolic n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6VZC4_9DELT)

HSP 1 Score: 198 bits (503), Expect = 1.500e-59
Identity = 110/187 (58.82%), Postives = 136/187 (72.73%), Query Frame = 0
Query:    2 ADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRAMPELERVGVILCGGNV 188
            A R+VAE GA L+ P D PDVIAGQGT+ LEL+ ++A+      LDA+VVP+GGGG++SG+A+A + L P   ++ AEPA ADDA RSKA G +         P TIADGL T+LG  TWPVVRDVVD +ITV ED I R MR+V+ERMKLVIEPS+AVGVAV +S   R +   +RVGV+LCGGNV
Sbjct:  136 AARVVAETGATLIPPYDHPDVIAGQGTIALELLDEIAD------LDAIVVPIGGGGMISGIALAARELAPRVKVIAAEPAGADDAARSKAGGALVPQT----GPKTIADGLLTSLGSLTWPVVRDVVDRVITVDEDAIVRAMRLVFERMKLVIEPSAAVGVAVALSDAMREVEGAQRVGVVLCGGNV 312          
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: A0A7S3HS14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HS14_9STRA)

HSP 1 Score: 191 bits (486), Expect = 5.600e-59
Identity = 104/169 (61.54%), Postives = 129/169 (76.33%), Query Frame = 0
Query:    4 RLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRA 172
            ++VAE GA LVHPS+DPDVIAGQGT+GLELV Q  E  AG  L+AV+VP+GGGG++ G+A+AVKAL P  L++GAEPA ADDAFRSKA GK+  H+       TIADGLKTTLG +T+P+V+++VD I  V ED+I    R V+ERMKL IEPS+ +GVAV  S  FRA
Sbjct:    1 KIVAEKGAALVHPSNDPDVIAGQGTIGLELVVQAREHWAGSDLEAVIVPLGGGGMIGGIAVAVKALLPSCLVIGAEPANADDAFRSKAEGKLLSHDK---PVKTIADGLKTTLGTNTFPIVQNLVDEIFLVEEDDIASATRSVWERMKLSIEPSAGIGVAVAASAAFRA 166          
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: A0A4D9D9L6_9STRA (PALP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9L6_9STRA)

HSP 1 Score: 198 bits (503), Expect = 6.950e-59
Identity = 117/199 (58.79%), Postives = 141/199 (70.85%), Query Frame = 0
Query:    2 ADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVR-DVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVM-SPEFRAMPEL--ERVGVILCGGNVDAAQLGAL 196
            A  LVA  G  LVHPSDD  V+AGQGTV LE + QV E T G  LDA+++PVGGGGLL G+A+A KAL P   I+GAEP+  DDAFRSKAAG +C H     +P +IADGL T LG+ T+P+V  D VD IITVSE EI + MR+VYERMKLVIEPS+ VGVAV M   E  A+  +   RVGV+LCGGN+D  +L  +
Sbjct:  154 AGELVASTGGALVHPSDDYPVMAGQGTVALEFLEQVEEETGGKSLDALIIPVGGGGLLGGMAVAAKALHPHIKIIGAEPSMVDDAFRSKAAGHLCLHPSP--SPRSIADGLLTVLGQRTYPIVSSDKVDAIITVSEQEIAQAMRLVYERMKLVIEPSAGVGVAVAMRGDELEAVLGIGCRRVGVVLCGGNLDMDRLDGI 350          
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: H2ZWY8_LATCH (PALP domain-containing protein n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H2ZWY8_LATCH)

HSP 1 Score: 194 bits (494), Expect = 4.850e-58
Identity = 109/200 (54.50%), Postives = 148/200 (74.00%), Query Frame = 0
Query:    4 RLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRAMPE-LERVGVILCGGNVDAAQLGAL--LSEA 200
            +L AE+ A  +H SD P+VIAGQGT+G+EL++QV E      LDAVVVPVGGGG+L+G+AIA+KAL P   I GAEP  ADD ++SK  G++    P  + PDTIADG K ++G  TWP+++D+VD + TV+EDEI++   +V+ERMKLVIEP++ +G+AVV+S  F+++PE L+ V VILCGGNVD   L  L  LSE+
Sbjct:  144 KLAAEMEALTIHSSDTPEVIAGQGTIGMELLQQVPE------LDAVVVPVGGGGMLAGIAIAIKALRPNVKIYGAEPQNADDCYQSKQRGQLT---PNPSPPDTIADGAKLSIGPKTWPIIQDLVDDVFTVTEDEIKQATCLVWERMKLVIEPTAGLGMAVVLSERFQSLPENLKNVAVILCGGNVDLGSLSWLKNLSES 334          
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: A0A7S2Y2H5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2H5_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.790e-57
Identity = 105/200 (52.50%), Postives = 140/200 (70.00%), Query Frame = 0
Query:    1 AADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVM-SPEFRAMPELERVGVILCGGNVDAAQLGALLSE 199
            A ++   ELGA+ VHP  DP V+ GQGTVGLELV QV EMT G  +DAV+VPVGGGGL SGVA+AVKA+ PG  ++G EP  A  A  S+ AG +       + P+T+ADGL+ ++G  TWP++RDVVD ++TVSE +I+  +++V  RMKL IEPS+AV +A  + S + +    L R+GVILCGGNVD ++L  LLS 
Sbjct:  151 ATEKAQEELGAKYVHPHQDPHVVCGQGTVGLELVEQVREMTGGMDMDAVLVPVGGGGLCSGVAVAVKAMSPGTKVIGVEPEMASSAKPSREAGNLISMN---SLPNTLADGLRVSVGPITWPIMRDVVDDVVTVSEAQIQDTLKLVVSRMKLAIEPSAAVALAAALYSEDIKKKEGLHRIGVILCGGNVDMSRLSNLLSS 347          
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Match: A0A7K9VH74_ANSSE (SRR racemase (Fragment) n=6 Tax=Neognathae TaxID=8825 RepID=A0A7K9VH74_ANSSE)

HSP 1 Score: 190 bits (482), Expect = 6.820e-57
Identity = 100/193 (51.81%), Postives = 145/193 (75.13%), Query Frame = 0
Query:    2 ADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVVVPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEPAGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERMKLVIEPSSAVGVAVVMSPEFRAMP-ELERVGVILCGGNVDAAQL 193
            A R+V E G  +VHP+ +P VIAGQGT+ LE++ QV E+      +AVVVPVGGGGL++G+A+A+KAL P   +  AEP  ADD ++SK  G++    P    PDTIAD +K+++G +TWP++RD+VD ++TVSE+EI+R  R+V+ERMKL+IEP++ VGVA V+S +F+A+P ++E V ++LCGGNVD + L
Sbjct:   89 AARVVQETGGVMVHPNQEPAVIAGQGTIALEVLEQVPEV------NAVVVPVGGGGLIAGIAVAIKALRPDVKVFAAEPRNADDCYQSKVRGELT---PNLHTPDTIADAVKSSIGENTWPIIRDLVDDVLTVSEEEIKRATRLVWERMKLLIEPTAGVGVAAVLSEQFQAVPRDVENVCIVLCGGNVDLSSL 272          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1185.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN0_ECTSI9.650e-7769.52Serine/Threonine Dehydratase n=2 Tax=Ectocarpus Ta... [more]
D7FHM2_ECTSI6.790e-7161.69Serine Racemase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A835Z2N3_9STRA7.980e-6655.10Serine/Threonine dehydratase n=1 Tax=Tribonema min... [more]
L8GDL9_ACACA1.330e-5957.67Serine/threonine dehydratase n=1 Tax=Acanthamoeba ... [more]
A0A0F6VZC4_9DELT1.500e-5958.82Threonine dehydratase, catabolic n=2 Tax=Sandaraci... [more]
A0A7S3HS14_9STRA5.600e-5961.54Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A4D9D9L6_9STRA6.950e-5958.79PALP domain-containing protein n=2 Tax=Monodopsida... [more]
H2ZWY8_LATCH4.850e-5854.50PALP domain-containing protein n=2 Tax=Latimeria c... [more]
A0A7S2Y2H5_9STRA1.790e-5752.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7K9VH74_ANSSE6.820e-5751.81SRR racemase (Fragment) n=6 Tax=Neognathae TaxID=8... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeGENE3D3.40.50.1100coord: 1..194
e-value: 1.7E-56
score: 193.1
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILY53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 2..192
IPR001926Pyridoxal-phosphate dependent enzymePFAMPF00291PALPcoord: 2..185
e-value: 3.1E-37
score: 128.6
NoneNo IPR availablePANTHERPTHR43050SERINE / THREONINE RACEMASE FAMILY MEMBERcoord: 2..191
NoneNo IPR availablePANTHERPTHR43050:SF1SERINE RACEMASEcoord: 2..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1185contigP-wetherbeei_contig1185:6857..7698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1185.5.1mRNA_P-wetherbeei_contig1185.5.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1185 6857..7698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1185.5.1 ID=prot_P-wetherbeei_contig1185.5.1|Name=mRNA_P-wetherbeei_contig1185.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp
AADRLVAELGARLVHPSDDPDVIAGQGTVGLELVRQVAEMTAGGRLDAVV
VPVGGGGLLSGVAIAVKALCPGALIVGAEPAAADDAFRSKAAGKVCGHEP
AGAAPDTIADGLKTTLGRHTWPVVRDVVDVIITVSEDEIRRWMRVVYERM
KLVIEPSSAVGVAVVMSPEFRAMPELERVGVILCGGNVDAAQLGALLSEA
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
IPR001926PLP-dep