prot_P-wetherbeei_contig11837.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11837.1.1
Unique Nameprot_P-wetherbeei_contig11837.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length75
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11837.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011665Brf1, TBP-binding domainPFAMPF07741BRF1coord: 6..72
e-value: 1.6E-9
score: 38.0
NoneNo IPR availableGENE3D1.20.5.650Single helix bincoord: 1..48
e-value: 2.9E-9
score: 38.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11837contigP-wetherbeei_contig11837:218..606 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11837.1.1mRNA_P-wetherbeei_contig11837.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11837 218..606 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11837.1.1 ID=prot_P-wetherbeei_contig11837.1.1|Name=mRNA_P-wetherbeei_contig11837.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=75bp
DDDALSEINEEEAAHYILTDEEIIAKDTFWAKDNADYLVQKAEKDHLAAK
TKASMGGSSADGKGGGGEEDKRKRG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011665BRF1_TBP-bd_dom