prot_P-wetherbeei_contig118.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig118.1.1
Unique Name	prot_P-wetherbeei_contig118.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	212

Homology

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BLAST of mRNA_P-wetherbeei_contig118.1.1 vs. uniprot
Match: D8LNZ2_ECTSI (Exonuclease domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ2_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 1.250e-55
Identity = 100/195 (51.28%), Postives = 135/195 (69.23%), Query Frame = 0

Query:   18 GGRLLGLDCEMVQTAKGFELARATLVDERRHVLLDEHVRPMNRVTDHMTKWSGITAETLAACSVRIEQVQVAMLRLVRSNDILVGHSLENDLRALKMVHRRCIDTSLLYPHHRPPRKTALRVLVQTHLGRAIQQESPDGHSSEQDAAAALELAQLKIRRGPHYGVDSRRVSVFESVSQHNCACYFVGDAMSCQRY 212
            G RL GLDCEM  T  G EL R TLVD +  V+LDE V+P N + D++T++SGIT + L     R+ QVQ A+LR+V   D+LVGHSLENDL+ALKMVH RC+DTSLLYPH +  R+++LR LV  +L R IQ  S  GH+S +DA AALELAQLK+ RGP++G +    S+F+ + +++     V  +  C+R+
Sbjct:  373 GARLFGLDCEMCVTGAGQELTRVTLVDSQHKVVLDELVKPENHIVDYVTRYSGITPQLLENVDTRLRQVQAAVLRVVGVRDVLVGHSLENDLKALKMVHLRCLDTSLLYPHPKKGRRSSLRYLVSMYLQRTIQ-GSDKGHNSAEDAVAALELAQLKVSRGPNFGAERSTDSIFDRLQRNHVPATMVASSEQCRRH 566

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BLAST of mRNA_P-wetherbeei_contig118.1.1 vs. uniprot
Match: A0A835ZA27_9STRA (Exonuclease domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA27_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.550e-53
Identity = 101/191 (52.88%), Postives = 128/191 (67.02%), Query Frame = 0

Query:   20 RLLGLDCEMVQTAKGFELARATLVDERRHVLLDEHVRPMNRVTDHMTKWSGITAETLAACSVRIEQVQVAMLRLVRSNDILVGHSLENDLRALKMVHRRCIDTSLLYPHHRPPRKTALRVLVQTHLGRAIQQESPDGHSSEQDAAAALELAQLKIRRGPHYGVDSRRVSVFESVSQHNCACYFVGDAMSCQ 210
            RL GLDCEM QT  G EL R TLVDE   VLLDE V+P N +TDHMT+WSGI+A+ L   + R+ QVQ  +L +V   D+LVGHSLENDLRAL+++H RC+DTS+L+PH +  +K +LR L   HLG+ IQ     GHSS +DAA AL LAQLK+ RGP YG    +  +   ++Q   A  FVG    C+
Sbjct:  400 RLFGLDCEMCQTCDGLELCRVTLVDEEHCVLLDELVKPANAITDHMTRWSGISAQMLQPIATRLCQVQARLLSIVDCRDLLVGHSLENDLRALQLIHERCLDTSILFPHPKSGKKCSLRSLALEHLGKTIQ-GGDAGHSSIEDAATALALAQLKVARGPRYGEGHIKQPL---LTQLEGAAAFVGGVQECR 586

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BLAST of mRNA_P-wetherbeei_contig118.1.1 vs. uniprot
Match: W7TCP9_9STRA (Small rna degrading nuclease 5 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCP9_9STRA)

HSP 1 Score: 180 bits (457), Expect = 4.180e-51
Identity = 90/164 (54.88%), Postives = 119/164 (72.56%), Query Frame = 0

Query:   21 LLGLDCEMVQTAKGFELARATLVDERRHVLLDEHVRPMNRVTDHMTKWSGITAETLAACSVRIEQVQVAMLRLVRSNDILVGHSLENDLRALKMVHRRCIDTSLLYPHHRPPR-KTALRVLVQTHLGRAIQQESPDGHSSEQDAAAALELAQLKIRRGPHYGVD 183
            +  LDCEM  T +G E+ R TLVDE+  VLLD  V+P + + DH+TK+SGIT E +A C  R+EQVQVA+LRLVR++ ILVGHSLE DL    ++H RC+DT++LY H R PR + ALRVL + +L R IQ +S  GH S +DA AAL+L +LK+ RGP +GV+
Sbjct:    1 MAALDCEMCLTTEGMEVTRLTLVDEKGEVLLDSFVKPYHDIRDHLTKYSGITPEIIAGCETRLEQVQVALLRLVRADTILVGHSLEQDLMVTGLIHLRCVDTAMLYAHPRGPRLRFALRVLAKRYLQRVIQ-DSAQGHCSREDAVAALDLVKLKVERGPDFGVE 163

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BLAST of mRNA_P-wetherbeei_contig118.1.1 vs. uniprot
Match: A0A4D9CV17_9STRA (Exonuclease domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV17_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.260e-50
Identity = 99/184 (53.80%), Postives = 128/184 (69.57%), Query Frame = 0

Query:    7 ESSAGPAASTPGG----RLLGLDCEMVQTAKGFELARATLVDERRHVLLDEHVRPMNRVTDHMTKWSGITAETLAACSVRIEQVQVAMLRLVRSNDILVGHSLENDLRALKMVHRRCIDTSLLYPHHRPPR-KTALRVLVQTHLGRAIQQESPDGHSSEQDAAAALELAQLKIRRGPHYGVDSR 185
            ES +G    T GG    R+  LDCEM  T +G E+ R TLVDER  VLLD  V+P + + DH+TK+SGIT E +A C  R+EQVQVA+LRLVR++ ILVGHSLE DL    ++H RC+DT++LY H R PR + ALRVL + +L R IQ +S  GH S +DA AAL+L +LK+ RGP +GV+ R
Sbjct:  384 ESESGCIGVTEGGWRHYRMAALDCEMCLTTEGMEVTRLTLVDERGGVLLDSFVKPYHDIRDHLTKYSGITPEIIAGCETRLEQVQVALLRLVRADTILVGHSLEQDLMVTGLIHLRCVDTAMLYAHPRGPRLRFALRVLAKRYLQRVIQ-DSAQGHCSREDAVAALDLVKLKVERGPDFGVEER 566

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BLAST of mRNA_P-wetherbeei_contig118.1.1 vs. uniprot
Match: A0A7S3QVQ8_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QVQ8_DUNTE)

HSP 1 Score: 181 bits (460), Expect = 3.620e-49
Identity = 92/168 (54.76%), Postives = 121/168 (72.02%), Query Frame = 0

Query:   20 RLLGLDCEMVQTAKGFELARATLVDERRHVLLDEHVRPMNRVTDHMTKWSGITAETLAACSVRIEQVQVAMLRLVRSNDILVGHSLENDLRALKMVHRRCIDTSLLYPHHR-PPRKTALRVLVQTHLGRAIQQESPDGHSSEQDAAAALELAQLKIRRGPHYGVDSRR 186
            R++GLDCEM  TA+GFEL RATLVDE   ++ DE V P N +TDH T++SGI A+TLA  + R+E +Q   LR+V +  ++VGH L+NDLRALK++H R +DT+LL+PH R PP K+ALRVL Q HLGR IQ      H S  DA AAL+L +LK+++GP YG+   R
Sbjct:  638 RMVGLDCEMCVTAEGFELTRATLVDEHGEIIFDELVLPHNPITDHNTRFSGIDAQTLAKVTTRLEDIQALFLRVVDAETLVVGHGLDNDLRALKVLHARVLDTALLFPHPRGPPAKSALRVLCQKHLGRTIQ---VGAHDSADDARAALDLVKLKLQKGPTYGLPDAR 802

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BLAST of mRNA_P-wetherbeei_contig118.1.1 vs. uniprot
Match: A0A2D4BEG7_PYTIN (Exonuclease, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEG7_PYTIN)

HSP 1 Score: 169 bits (428), Expect = 2.560e-46
Identity = 87/161 (54.04%), Postives = 112/161 (69.57%), Query Frame = 0

Query:   21 LLGLDCEMVQTAKGFELARATLVDERRHVLLDEHVRPMNRVTDHMTKWSGITAETLAACSVRIEQVQVAMLRLVRSNDILVGHSLENDLRALKMVHRRCIDTSLLYPHHR-PPRKTALRVLVQTHLGRAIQQESPDGHSSEQDAAAALELAQLKIRRGPHY 180
            LL LDCEM +T KG EL R TL+D    VLLDE+VRP N + D+ T++SGIT E + +C+  +  +Q   L LV +  ILVGHS+ENDL ALK+VH R IDT++LYPH R PP ++ALR L  T+L RAIQ    DGH S +DA A L+L QLK++ GP +
Sbjct:  211 LLALDCEMCKTTKGVELTRVTLIDSTETVLLDEYVRPTNPIVDYCTEYSGITYEIMESCTTTLADIQKQFLELVPAEAILVGHSIENDLLALKVVHTRVIDTTVLYPHPRGPPFRSALRFLTSTYLNRAIQ-TGTDGHCSVEDAVATLQLLQLKVKHGPTF 370

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BLAST of mRNA_P-wetherbeei_contig118.1.1 vs. uniprot
Match: D0MSP7_PHYIT (Exonuclease, putative n=3 Tax=Phytophthora TaxID=4783 RepID=D0MSP7_PHYIT)

HSP 1 Score: 169 bits (427), Expect = 3.240e-46
Identity = 89/161 (55.28%), Postives = 113/161 (70.19%), Query Frame = 0

Query:   21 LLGLDCEMVQTAKGFELARATLVDERRHVLLDEHVRPMNRVTDHMTKWSGITAETLAACSVRIEQVQVAMLRLVRSNDILVGHSLENDLRALKMVHRRCIDTSLLYPHHR-PPRKTALRVLVQTHLGRAIQQESPDGHSSEQDAAAALELAQLKIRRGPHY 180
            LL LDCEM +T KG EL R TLVD    VLLDE+VRP N + D+ T++SGIT E + A ++R+  +Q   L LV +  ILVGHS+ENDL+AL+++HRR IDT  LYPH + PP +TALR L   +L RAIQ    DGH S +DA A L+LAQLKI+ GP +
Sbjct:  205 LLALDCEMCRTTKGVELTRLTLVDASEKVLLDEYVRPKNPIVDYCTRYSGITCEIMEATTMRLADIQDKFLALVPAEAILVGHSIENDLQALRVLHRRVIDTVCLYPHPKGPPFRTALRFLASQYLNRAIQ-TGTDGHCSVEDAIATLQLAQLKIKHGPTF 364

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BLAST of mRNA_P-wetherbeei_contig118.1.1 vs. uniprot
Match: A0A833STM0_PHYIN (Putative exonuclease domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833STM0_PHYIN)

HSP 1 Score: 168 bits (426), Expect = 5.590e-46
Identity = 88/161 (54.66%), Postives = 113/161 (70.19%), Query Frame = 0

Query:   21 LLGLDCEMVQTAKGFELARATLVDERRHVLLDEHVRPMNRVTDHMTKWSGITAETLAACSVRIEQVQVAMLRLVRSNDILVGHSLENDLRALKMVHRRCIDTSLLYPHHR-PPRKTALRVLVQTHLGRAIQQESPDGHSSEQDAAAALELAQLKIRRGPHY 180
            LL LDCEM +T KG EL R TLVD    VLLDE+VRP N + D+ T++SG+T E + A ++R+  +Q   L LV +  ILVGHS+ENDL+AL+++HRR IDT  LYPH + PP +TALR L   +L RAIQ    DGH S +DA A L+LAQLKI+ GP +
Sbjct:  218 LLALDCEMCRTTKGVELTRLTLVDASEKVLLDEYVRPKNPIVDYCTRYSGVTCEIMEATTMRLADIQDKFLALVPAEAILVGHSIENDLQALRVLHRRVIDTVCLYPHPKGPPFRTALRFLASQYLNRAIQ-TGTDGHCSVEDALATLQLAQLKIKHGPTF 377

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BLAST of mRNA_P-wetherbeei_contig118.1.1 vs. uniprot
Match: A0A3R7G6N1_9STRA (Exonuclease domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G6N1_9STRA)

HSP 1 Score: 168 bits (426), Expect = 6.640e-46
Identity = 86/161 (53.42%), Postives = 115/161 (71.43%), Query Frame = 0

Query:   21 LLGLDCEMVQTAKGFELARATLVDERRHVLLDEHVRPMNRVTDHMTKWSGITAETLAACSVRIEQVQVAMLRLVRSNDILVGHSLENDLRALKMVHRRCIDTSLLYPHHR-PPRKTALRVLVQTHLGRAIQQESPDGHSSEQDAAAALELAQLKIRRGPHY 180
            LL LDCEM +T KG EL R TL+D    VLLDE+VRP N + D+ T++SGIT E + A ++R+  +Q   L LV +  ILVGHS+ENDL+ L+++HRR IDT+ +YPH + PP ++ALR LV+ +L RAIQ    DGH S +DA A L+LAQLKI+ GP +
Sbjct:  229 LLALDCEMCRTTKGVELTRLTLIDASEKVLLDEYVRPKNPIVDYCTQYSGITCEIMEATTMRLSDIQKQFLELVPAEAILVGHSIENDLQVLRVLHRRVIDTTCMYPHPKGPPFRSALRFLVRQYLNRAIQ-TGTDGHCSVEDAIATLQLAQLKIKHGPTF 388

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BLAST of mRNA_P-wetherbeei_contig118.1.1 vs. uniprot
Match: A0A662XFZ9_9STRA (Exonuclease domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XFZ9_9STRA)

HSP 1 Score: 168 bits (426), Expect = 9.470e-46
Identity = 86/161 (53.42%), Postives = 116/161 (72.05%), Query Frame = 0

Query:   21 LLGLDCEMVQTAKGFELARATLVDERRHVLLDEHVRPMNRVTDHMTKWSGITAETLAACSVRIEQVQVAMLRLVRSNDILVGHSLENDLRALKMVHRRCIDTSLLYPHHR-PPRKTALRVLVQTHLGRAIQQESPDGHSSEQDAAAALELAQLKIRRGPHY 180
            LL LDCEM +T KG EL R TL+D    VLLDE+VRP N + D+ T++SGIT + + A ++R+ ++Q   L LV +  ILVGHS+ENDL+AL+++HRR IDT+ +YPH + PP ++ALR L   +L RAIQ    DGH S +DA A L+LAQLKI+RGP +
Sbjct:  253 LLALDCEMCRTTKGVELTRLTLIDSGEQVLLDEYVRPKNPIVDYCTQYSGITCDIMEATTMRLAEIQQRFLDLVPAEAILVGHSIENDLQALRVLHRRVIDTTTIYPHPKGPPFRSALRFLTSQYLHRAIQ-TGTDGHCSVEDAVATLQLAQLKIKRGPTF 412

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig118.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig118.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LNZ2_ECTSI	1.250e-55	51.28	Exonuclease domain-containing protein n=2 Tax=Ecto...	[more]
A0A835ZA27_9STRA	1.550e-53	52.88	Exonuclease domain-containing protein n=1 Tax=Trib...	[more]
W7TCP9_9STRA	4.180e-51	54.88	Small rna degrading nuclease 5 n=1 Tax=Nannochloro...	[more]
A0A4D9CV17_9STRA	1.260e-50	53.80	Exonuclease domain-containing protein n=1 Tax=Nann...	[more]
A0A7S3QVQ8_DUNTE	3.620e-49	54.76	Hypothetical protein n=1 Tax=Dunaliella tertiolect...	[more]
A0A2D4BEG7_PYTIN	2.560e-46	54.04	Exonuclease, putative n=1 Tax=Pythium insidiosum T...	[more]
D0MSP7_PHYIT	3.240e-46	55.28	Exonuclease, putative n=3 Tax=Phytophthora TaxID=4...	[more]
A0A833STM0_PHYIN	5.590e-46	54.66	Putative exonuclease domain-containing protein n=1...	[more]
A0A3R7G6N1_9STRA	6.640e-46	53.42	Exonuclease domain-containing protein n=3 Tax=Phyt...	[more]
A0A662XFZ9_9STRA	9.470e-46	53.42	Exonuclease domain-containing protein n=2 Tax=Noth...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 20..179 e-value: 2.9E-31 score: 119.9
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 23..147 e-value: 1.2E-6 score: 29.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 19..193 e-value: 3.3E-45 score: 155.9
None	No IPR available	PANTHER	PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	coord: 14..183
None	No IPR available	PANTHER	PTHR12801:SF115	LD29573P	coord: 14..183
IPR034922	RNA exonuclease 1-like, exonuclease domain	CDD	cd06145	REX1_like	coord: 22..162 e-value: 1.25667E-67 score: 202.33
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 19..174

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig118	contig	P-wetherbeei_contig118:586..1931 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig118.1.1	mRNA_P-wetherbeei_contig118.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig118 586..1931 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig118.1.1 ID=prot_P-wetherbeei_contig118.1.1|Name=mRNA_P-wetherbeei_contig118.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=212bp
PGSSSAESSAGPAASTPGGRLLGLDCEMVQTAKGFELARATLVDERRHVL
LDEHVRPMNRVTDHMTKWSGITAETLAACSVRIEQVQVAMLRLVRSNDIL
VGHSLENDLRALKMVHRRCIDTSLLYPHHRPPRKTALRVLVQTHLGRAIQ
QESPDGHSSEQDAAAALELAQLKIRRGPHYGVDSRRVSVFESVSQHNCAC
YFVGDAMSCQRY

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013520	Exonuclease_RNaseT/DNA_pol3
IPR036397	RNaseH_sf
IPR034922	REX1-like_exo
IPR012337	RNaseH-like_sf