prot_P-wetherbeei_contig11617.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11617.2.1
Unique Nameprot_P-wetherbeei_contig11617.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length435
Homology
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A6H5KUC8_9PHAE (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC8_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 2.620e-32
Identity = 139/448 (31.03%), Postives = 175/448 (39.06%), Query Frame = 0
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRG-AVTDSDVWPGTQGSDHCPVHAEFDLSR---LPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARSG----AAAANGGDGATTXXXXXXXXSVEKSCSDXXXXXAEGSAGPRAAASKSTTASLFDAFASSVRMPAAGGGWGAKCGACKSGRKAAGKRAAMGKGGKPAPDKQMKLTAFMAAPGDGGGK----AEGNYSKENLPVKAYAAEAEPRTEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELTAAXXXXTAGAXXXXXXXXXXXXXXXXXXXXXXXXXXARGGSSGSNCALRGGSAPMDRLQSAPTAARGWQALM-QPAATPLCDHREETVERVVKKAGPNQGRHFFVCKRSAGNWPQDRNARCDFFQWSTKGVQGFK 435
            P R+ A+TCW T+TGARDNNYG+RIDYI+        A+   D+ P   GSDHCPV A F       L     G S         +      HPPECSCFYPE + KQ K+  +F   G    +A    G GA            ++   D     A G   P A   +   A +         +P  G G   K GA  +G      +     G                 PG GG +    A G  + +N+   A AA    R  P+                                        R    A       A  XXXXX             XXXXX   G   G N A  GGS           +A  W+A+  +  + P C+H E +++R V K GPN  R F+ C RSAGNWP DRNARC FFQW   GV+G+K
Sbjct:  274 PDRKGAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAVGLAADAPGKSEGDEIARSRSESELPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGA-----------YDRLIGDRNGAGASGVTRPAAGGRRGVVAFMR-------ALP--GTGVTGKDGAGVAGSLMMRAKKVGSAGRTSXXXXXXXXXXXXXRPGSGGSRQSKLAFGPVANDNVSTSAGAAS---REAPAGGRGEVSGTRRRAEGAVPLRTGNERAGGGGAQTSQAIQPPRSTVHASGGGHDTAGAXXXXXSVSTIGSSRISKPXXXXXVDTGSGEGPNGA--GGSRD---------SAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYK 687          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: D7FKG3_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG3_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 1.570e-31
Identity = 137/452 (30.31%), Postives = 177/452 (39.16%), Query Frame = 0
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRG-AVTDSDVWPGTQGSDHCPVHAEFDL---SRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARSG----AAAANGGDGATTXXXXXXXXSVEKSCSDXXXXXAEGSAG-PRAAASKSTTASLFDAFASSVRMPAAGGGWGAKCGACKSGRKAAGKRAAMGKGGKPAPDKQMKLTAFMAAPGDGGGK----AEGNYSKENLPVKAYAAEAEPRTEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RELTAAXXXXTAGAXXXXXXXXXXXXXXXXXXXXXXXXXXARGGSSGSNCALRGGSAPMDRLQSAPTAARGWQALM-QPAATPLCDHREETVERVVKKAGPNQGRHFFVCKRSAGNWPQDRNARCDFFQWSTKGVQGFK 435
            P R+ A+TCW T+TGARDNNYG+RIDYI+        A+   D+ P   GSDHCPV A F     + L     G S         +      HPPECSCFYPE + KQ K+  +F   G    +A    G GA          + E   +       +G A   RA      T     + A S+ M       G K G+             +G+    +      LTA    PG GG +    A G  +  N+   A A   E     +                       XXXXXXXX            R   +     TAGA                            G  +G      GG    D       +A  W+A+  +  + P C+H E +++R V K GPN  R F+ C RSAGNWP DRNARC FFQW   GV+G+K
Sbjct:  261 PDRKSAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLGSDHCPVRARFAFPLAAGLAADAPGESEGDEIARSRSASEWPEHPPECSCFYPELTAKQEKLAKYFVAGGQNEESAVGTEGKGADGRLVRDGNGARESGATRPAAGGGKGVAAFMRALPGAGVTGKDGASVAGSLMMR------GKKVGS-------------VGRTSSTSSSGGGSLTARR--PGSGGSRQSKLAFGPAANGNVSTSAGATSREATAGGNGAGSGTSRRAEGTVPLRTCNQRGXXXXXXXXAQTSQAIQPPRSRVHASGGGHDTAGAGGGSGSVSTIGSCRLSNPGGEG------GVETGPGEGPNGGGGSRD-------SAEAWKAIFGRKKSAPTCEHGEPSIQRTVLKPGPNHNRRFYTCARSAGNWPTDRNARCTFFQWRRDGVRGYK 678          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A1S3K520_LINUN (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K520_LINUN)

HSP 1 Score: 99.0 bits (245), Expect = 1.370e-18
Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 0
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGL-RGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARS 114
            P+  +A+TCW T TGAR  NYG+RIDYIL S  L  G V D  +WP  +GSDHCPV AE   +                    +   A +PP C+ F PE+SGKQ K+  FF++S
Sbjct:  253 PNEENAFTCWNTSTGARQTNYGTRIDYILASADLCEGLVKDCVIWPDIEGSDHCPVKAELTCN--------------------IVQSAKYPPICTKFMPEFSGKQQKLSEFFSKS 347          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A835ZDF2_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF2_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 5.350e-18
Identity = 178/454 (39.21%), Postives = 211/454 (46.48%), Query Frame = 0
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGL-RGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARSGAAAANGGDGATTXXXXXXXXSVEKSCSDXXXXXAEGSAGPRAAASKSTTAS---LFDAFASSVR------------MPAAGGGWGAKCGACKSGRKAAGKRAAMG--KGGKPAPDKQMKLTAFMAAPGDGGGKAEGNYSKENLPVKAYAAEAEPRTEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELTAAXXXXTAGAXXXXXXXXXXXXXXXXXXXXXXXXXXARGGSSGSNCALRGGSAPMDRLQSAPTAARGWQALMQPAATPLCD-HREETVERVVKKAGPNQGRHFFVCKRSAGNWPQDRNARCDFFQWSTKGVQGFK 435
            P    A+TCW TK GAR NNYG+RIDY+L S    R A+  S +WP   GSDHCPV A FD             A RA   AA  P   HPP+CSCF    +    K+  FFA +   +         XXXXXXX +   S S       E       AA + +T S   LFD  A+               +P AG    A   +  SG  A G   A G                                     + +KA+ A A PR                        XXXXXXXXXXXXXXXXXXXX      XXXX    XXXXXXXXXXXXXXXXXXXXXXXXX  RG       A R GS+ +D       A   WQAL+     P+C  HRE  VER V KAGPNQGR F+ C R  G+WP+D NARC++F++   G +G++
Sbjct:  289 PAAERAFTCWNTKKGARANNYGTRIDYVLASAAFARAALRASAIWPHVVGSDHCPVVATFD-------------APRAHAAAAAAP---HPPQCSCFLAAVA--VPKLTAFFAPTRVRSGX------XXXXXXXXDNASDSASQPPELACE-------AAEEDSTLSCEALFDVPAARFVQEPQDPILPPPCIPRAGATAVAPFFSGSSGGGANGVPRAQGFTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGMTQMTLKAFGAAA-PRXX----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRGSD-----ASRAGSSGVD-------AKSAWQALLAKRPPPVCSGHREPAVERTVLKAGPNQGRRFYCCARGEGDWPKDPNARCNYFEFRESGARGYR 676          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A0C2XZL0_9AGAM (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2XZL0_9AGAM)

HSP 1 Score: 94.7 bits (234), Expect = 4.320e-17
Identity = 55/123 (44.72%), Postives = 70/123 (56.91%), Query Frame = 0
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIH--PPECSCFYPEYSGKQVKIRTFFA-RSGAAAAN 120
            P R   YTCW TKT ARD NYG+RID ILI+ GLR  V D+D+ P  +GSDHCPV  +F  + + DG G       A+ G+  G       P  C+  + EYS KQ  + TFF  R+ +  AN
Sbjct:  204 PTREGMYTCWNTKTSARDGNYGTRIDLILITPGLRRWVKDADIQPLVKGSDHCPVFLDFHDTII-DGEGRELKLSDAIRGSTTGSMGTRELPRICARNWDEYSAKQTLLSTFFTPRTASTLAN 325          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A067D204_SAPPC (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D204_SAPPC)

HSP 1 Score: 92.0 bits (227), Expect = 1.490e-16
Identity = 48/114 (42.11%), Postives = 61/114 (53.51%), Query Frame = 0
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARS 114
            P R  AYTCW+  TGAR+ NYG R+DYIL+   L  A+T  DVW   +GSDHCPV A   L+  P                 + P  +  P C+ FYPE++GKQ  I+ F   S
Sbjct:  193 PMREKAYTCWRALTGARETNYGVRLDYILLDSRLGSALTSCDVWQEKEGSDHCPVLATLSLA-FP-------------ASHVIAPTTV--PSCAKFYPEFAGKQTSIQRFLRGS 290          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A369J694_HYPMA (DNA-(Apurinic or apyrimidinic site) lyase 2 n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369J694_HYPMA)

HSP 1 Score: 92.4 bits (228), Expect = 2.220e-16
Identity = 53/120 (44.17%), Postives = 70/120 (58.33%), Query Frame = 0
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAV-GPDAIHPPECSC-FYPEYSGKQVKIRTFFARSGAAA 118
            P R+  YTCW TK  ARD+NYG+RIDYILI+ GL   V  +D+ P  +GSDHCPV+   DL        G+    R + G    G ++  PP  +  F+ EYSGKQ+ +  FF R+G  A
Sbjct:  266 PDRKGMYTCWNTKISARDSNYGTRIDYILITRGLLPWVKGADIQPQIKGSDHCPVY--LDLQESITNNDGTVVHLRDVLGLKQDGDNSSEPPRLAAKFWDEYSGKQMLLEKFFGRTGDLA 383          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A8H3E5K0_9AGAM (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3E5K0_9AGAM)

HSP 1 Score: 89.7 bits (221), Expect = 1.530e-15
Identity = 49/122 (40.16%), Postives = 68/122 (55.74%), Query Frame = 0
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEF---------DLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFAR 113
            P R   +TCW T+  AR++NYG+RIDYIL++ GL       D+ P  +GSDHCPV  +F          +SRL D  GGS  +G+  +          PP  + F+ E+SGKQ  + TFFA+
Sbjct:  248 PDREKMFTCWDTRINARESNYGTRIDYILVTKGLLPWFKHGDIQPDIRGSDHCPVFIDFHDEITSPDGQVSRLVDVLGGSDTSGQRRD---------PPPISTKFWSEFSGKQKLLSTFFAK 360          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A0H2R7U9_9AGAM (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2R7U9_9AGAM)

HSP 1 Score: 88.2 bits (217), Expect = 5.620e-15
Identity = 48/115 (41.74%), Postives = 66/115 (57.39%), Query Frame = 0
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRAL-EGAAVGPDAIHPPE-CSCFYPEYSGKQVKIRTFFAR 113
            P R+  YTCW TK  AR+ NYG+RIDYIL+S GL       D+ P  +GSDHCPV+ +     L D   G +   R L +   +  +   PP  C+ F+PE+SGKQ  + +FF +
Sbjct:  278 PDRKGMYTCWNTKISARETNYGTRIDYILLSRGLLPWFKHGDIMPSVRGSDHCPVYID-----LHDEIAGENGEVRKLRDEMQMSSERREPPRLCAKFWPEFSGKQQLLSSFFGK 387          
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Match: A0A8J7NU70_ATRSP (DNA-(apurinic or apyrimidinic site) endonuclease (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7NU70_ATRSP)

HSP 1 Score: 87.4 bits (215), Expect = 6.040e-15
Identity = 50/124 (40.32%), Postives = 60/124 (48.39%), Query Frame = 0
Query:    1 PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGA-VTDSDVWPGTQGSDHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEYSGKQVKIRTFFARSGAAAANGGD 123
            P R  A+TCW T TGAR  NYG+RIDYIL S GL  A   DSD+ P  +GSDHCPV      + L                         PP C+   PE+ G+Q K+  F  + G AAA   D
Sbjct:  115 PARSHAFTCWSTVTGARQTNYGTRIDYILASRGLAEAEFLDSDILPEVEGSDHCPVRGHLRCALLSS--------------------PRCPPLCTRHMPEFMGRQQKLSRFLVKVGQAAATAAD 218          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11617.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUC8_9PHAE2.620e-3231.03DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
D7FKG3_ECTSI1.570e-3130.31DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A1S3K520_LINUN1.370e-1843.48DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A835ZDF2_9STRA5.350e-1839.21DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
A0A0C2XZL0_9AGAM4.320e-1744.72DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A067D204_SAPPC1.490e-1642.11DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A369J694_HYPMA2.220e-1644.17DNA-(Apurinic or apyrimidinic site) lyase 2 n=1 Ta... [more]
A0A8H3E5K0_9AGAM1.530e-1540.16DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A0H2R7U9_9AGAM5.620e-1541.74DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A8J7NU70_ATRSP6.040e-1540.32DNA-(apurinic or apyrimidinic site) endonuclease (... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 1..60
e-value: 6.7E-22
score: 80.3
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 2..61
IPR010666Zinc finger, GRF-typePFAMPF06839zf-GRFcoord: 379..427
e-value: 2.4E-10
score: 40.3
NoneNo IPR availablePANTHERPTHR22748:SF4DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2coord: 1..424
IPR004808AP endonuclease 1PANTHERPTHR22748AP ENDONUCLEASEcoord: 1..424
IPR020848AP endonuclease 1, conserved sitePROSITEPS00728AP_NUCLEASE_F1_3coord: 20..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11617contigP-wetherbeei_contig11617:1..1305 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11617.2.1mRNA_P-wetherbeei_contig11617.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11617 1..1305 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11617.2.1 ID=prot_P-wetherbeei_contig11617.2.1|Name=mRNA_P-wetherbeei_contig11617.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=435bp
PHRRDAYTCWQTKTGARDNNYGSRIDYILISGGLRGAVTDSDVWPGTQGS
DHCPVHAEFDLSRLPDGGGGSSAAGRALEGAAVGPDAIHPPECSCFYPEY
SGKQVKIRTFFARSGAAAANGGDGATTGASAGAAASVEKSCSDGGGTSAE
GSAGPRAAASKSTTASLFDAFASSVRMPAAGGGWGAKCGACKSGRKAAGK
RAAMGKGGKPAPDKQMKLTAFMAAPGDGGGKAEGNYSKENLPVKAYAAEA
EPRTEPSSSGAGASAGAALQASCQNAASESAGAASASEPAEAEAARAREL
TAAAAPATAGAAAAAPATAGAAAAAAAAAVRAAAAGTARGGSSGSNCALR
GGSAPMDRLQSAPTAARGWQALMQPAATPLCDHREETVERVVKKAGPNQG
RHFFVCKRSAGNWPQDRNARCDFFQWSTKGVQGFK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR010666Znf_GRF
IPR004808AP_endonuc_1
IPR020848AP_endonuclease_F1_CS