prot_P-wetherbeei_contig11608.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11608.1.1
Unique Nameprot_P-wetherbeei_contig11608.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length368
Homology
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BLAST of mRNA_P-wetherbeei_contig11608.1.1 vs. uniprot
Match: D7FK49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK49_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.580e-6
Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 0 
Query:   50 EALNMCPNHADALVARGASLASRGRLAAAAADFRQALSIDPAGRNASEYLRKTTARLEQ 108
            +AL MCP+H D LVARGA+ A+ GRL  A  D  +ALS++P   NAS YL++T  R+E+
Sbjct:  307 QALGMCPDHDDGLVARGAAFATTGRLRQAVQDLSRALSVNPQNGNASSYLKETRRRMER 365
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11608.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK49_ECTSI2.580e-652.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 203..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..280
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 49..110
e-value: 8.5E-9
score: 37.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 50..106
IPR039190Tetratricopeptide repeat protein 14PANTHERPTHR23184TETRATRICOPEPTIDE REPEAT PROTEIN 14coord: 50..103
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 59..92
score: 9.1749

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11608contigP-wetherbeei_contig11608:421..1524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11608.1.1mRNA_P-wetherbeei_contig11608.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11608 173..1633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11608.1.1 ID=prot_P-wetherbeei_contig11608.1.1|Name=mRNA_P-wetherbeei_contig11608.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=368bp
MCISSRKLSGIPGADYYPILMPRPFDHSFYPLPPPTALVAARRVPPPGGE
ALNMCPNHADALVARGASLASRGRLAAAAADFRQALSIDPAGRNASEYLR
KTTARLEQAGGVGLGLGLGRSLEPGGSAGAAGGGMVGGVGVGGGSEEGGD
GGYGVVGAAASAAKLAGLGAAAAGSGAVGGAAAATGGNGWEMEFAGDDFD
PEKEALRRMRAMLEAEAEERRKRKHGRHGSDADSTIGSSDGSSSGGGAGR
RRERRDKRRRRRRRRQNEADDEDGEGEGRQRKKHKKHKKYKKHKKHKRSR
KSSPPGERTDASDGASGAESDGVFLLPMADSGTGTGIGASAAAAGRDTVP
SPPPHPILARRTKGLWG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR039190TTC14
IPR019734TPR_repeat