prot_P-wetherbeei_contig11532.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11532.1.1
Unique Nameprot_P-wetherbeei_contig11532.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length82
Homology
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BLAST of mRNA_P-wetherbeei_contig11532.1.1 vs. uniprot
Match: D7G1X1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X1_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 1.500e-5
Identity = 35/77 (45.45%), Postives = 46/77 (59.74%), Query Frame = 0 
Query:    4 LPEGLMLTHVRALHEDKDALCSLCCERQYIGRTLVFADSMAGARRRTVLLALLWLAVAALLHAQMQQWQRRCNLDLF 80
            LP  L L  +++L  +KD    L C   Y GRTL+F +++A ARR + LL  L +  A  LHAQMQQ QR  +LD F
Sbjct:  507 LPSTLKLCSIKSLQMEKDVHAYLFCA-MYPGRTLIFVNAIAIARRLSALLCALSVP-ATPLHAQMQQRQRLKSLDRF 581
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BLAST of mRNA_P-wetherbeei_contig11532.1.1 vs. uniprot
Match: A0A6H5KFI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI4_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 2.070e-5
Identity = 35/77 (45.45%), Postives = 46/77 (59.74%), Query Frame = 0 
Query:    4 LPEGLMLTHVRALHEDKDALCSLCCERQYIGRTLVFADSMAGARRRTVLLALLWLAVAALLHAQMQQWQRRCNLDLF 80
            LP  L L  +++L  +KD    L C   Y GRTL+F +++A ARR + LL  L +  A  LHAQMQQ QR  +LD F
Sbjct:  672 LPSTLKLCSIKSLQMEKDVHAYLFCA-MYPGRTLIFVNAIAIARRLSALLCALNVP-ATPLHAQMQQRQRLKSLDRF 746
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11532.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1X1_ECTSI1.500e-545.45DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KFI4_9PHAE2.070e-545.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11532contigP-wetherbeei_contig11532:1890..2135 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11532.1.1mRNA_P-wetherbeei_contig11532.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11532 1890..2139 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11532.1.1 ID=prot_P-wetherbeei_contig11532.1.1|Name=mRNA_P-wetherbeei_contig11532.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=82bp
MLTLPEGLMLTHVRALHEDKDALCSLCCERQYIGRTLVFADSMAGARRRT
VLLALLWLAVAALLHAQMQQWQRRCNLDLFWE
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