prot_P-wetherbeei_contig1140.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1140.1.2
Unique Nameprot_P-wetherbeei_contig1140.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length386
Homology
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BLAST of mRNA_P-wetherbeei_contig1140.1.2 vs. uniprot
Match: D8LHE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE0_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 8.210e-44
Identity = 81/172 (47.09%), Postives = 104/172 (60.47%), Query Frame = 0 
Query:    1 MQGNCPYGGASKCAFAHGNHDLRTLTLEEMESTGRIPNKQKFRCYPCITWCATGSCPYFGRCVFLHDTRLRGPAPAWLY----NANTATRSAAFGGPSPFARDLLFWPDVKRHVDDGQRV--------------------PSAEAQYELDPAMDSGDDFVRRAVYRLWYSLI 148
             QG C    A KCAFAHG H+LR  +L++ME TGRIPN  KFRCYPC+TW  TG+CPYF RCVF+HD R+RGP  A+LY    N + +TRS    G SP  RD+ +WPD+ R   DG  +                    P+  A Y++DP+M   +D   RAVY+LWY+L+
Sbjct:   22 QQGRC-VAEAWKCAFAHGTHELRRQSLDQMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPTAAYLYKHNGNRSHSTRSGGSVG-SPLGRDIFYWPDMPRTDADGNEIMDPSAWMDVAQLMIVGVSSLPTVSANYDMDPSMLHSEDATERAVYQLWYTLV 191
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BLAST of mRNA_P-wetherbeei_contig1140.1.2 vs. uniprot
Match: A0A7S2XMC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMC7_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.820e-12
Identity = 35/87 (40.23%), Postives = 52/87 (59.77%), Query Frame = 0 
Query:    5 CPYGGASKCAFAHGNHDLRTLTLEEMESTGRIPNKQKFRCYPCITWCATGSCPYFGRCVFLHDTRLRGPAPAWLYNANTATRSAAFG 91
            CP+   S+C +AHG+ +L+   L  ME+ G + + + FR +PC+TW ATG+CP+  +C  LHD R  G  P WL N  T+  +   G
Sbjct:  322 CPF--RSECLYAHGDDELKYTKLMAMENAGLV-DVETFRTHPCLTWIATGACPFDSKCELLHDPRAAGSIPPWLPNVKTSINNDISG 405
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BLAST of mRNA_P-wetherbeei_contig1140.1.2 vs. uniprot
Match: A0A7S3Q9Y3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9Y3_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 9.190e-9
Identity = 34/89 (38.20%), Postives = 50/89 (56.18%), Query Frame = 0 
Query:    5 CPYGGASKCAFAHGNHDLRTLTLEEMESTGRIPNKQKFRCYPCITWCATGSCPYFGRCVFLHDTRLRGP--APAWLYNANTATRSAAFG 91
            C +G   KC +AHG  +L+   L ++E  G + + + FR +PC+TW ATG+CP+  RC+ LHD R+       AWL +A T       G
Sbjct:  436 CQFG--DKCNYAHGAQELKLTKLMDLERAGLV-DIEIFRTHPCLTWVATGACPFDTRCIGLHDPRVTSDDHEMAWLPHAETMINKVTDG 521
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1140.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHE0_ECTSI8.210e-4447.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XMC7_9STRA2.820e-1240.23Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S3Q9Y3_9STRA9.190e-938.20Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1370.210coord: 1..72
e-value: 4.3E-6
score: 28.7
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 1..20
score: 10.342658

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1140contigP-wetherbeei_contig1140:61..1634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1140.1.2mRNA_P-wetherbeei_contig1140.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1140 19..2756 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1140.1.2 ID=prot_P-wetherbeei_contig1140.1.2|Name=mRNA_P-wetherbeei_contig1140.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=386bp
MQGNCPYGGASKCAFAHGNHDLRTLTLEEMESTGRIPNKQKFRCYPCITW
CATGSCPYFGRCVFLHDTRLRGPAPAWLYNANTATRSAAFGGPSPFARDL
LFWPDVKRHVDDGQRVPSAEAQYELDPAMDSGDDFVRRAVYRLWYSLIDF
CHEASGDGDDGACTALLLPPELGGAACCVPAGPASFAAKKLHVHDNDRLA
VFITLAKGVSVAPFSAPLWQLPSAVGNEQNLCGACLCRVVHVKDVSMDKN
AALEGCPAAVAATAVSGHAAGGHNGPEKRVDAGKRGVAGNGPALADKRTT
VLPLGTSVAGRNGNVANSGLPKGDWRRLALLRKLHASGNDRGIVYKLFFA
EGQHCAANGANAPNAVNAPPTTCGMRRALAAPDRW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH