prot_P-wetherbeei_contig11340.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11340.2.1
Unique Nameprot_P-wetherbeei_contig11340.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length301
Homology
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BLAST of mRNA_P-wetherbeei_contig11340.2.1 vs. uniprot
Match: A0A7S2EG69_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EG69_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.350e-8
Identity = 25/40 (62.50%), Postives = 28/40 (70.00%), Query Frame = 0 
Query:   20 LRSLPCGHIFHRGCIDTWLLGVFSETGCCTNSCPVCKARP 59
            LR LPCGH+FH GCID WL G+ S   C T+ CP CK RP
Sbjct:  135 LRVLPCGHLFHIGCIDKWLSGIHSHEECFTSGCPTCKKRP 174
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11340.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S2EG69_9STRA2.350e-862.50Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 11..66
e-value: 8.7E-10
score: 40.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..300
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 20..59
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 23..56
score: 9.228865

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11340contigP-wetherbeei_contig11340:676..1578 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11340.2.1mRNA_P-wetherbeei_contig11340.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11340 455..2170 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11340.2.1 ID=prot_P-wetherbeei_contig11340.2.1|Name=mRNA_P-wetherbeei_contig11340.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=301bp
MPPLRIAIFSPAGFSPLPQLRSLPCGHIFHRGCIDTWLLGVFSETGCCTN
SCPVCKARPVTTTVGAGAHGGGNGRAGSVSVTESGDSQSGDVQVSISAEA
RTSAAPSDACISESGGSSGGSVSGGTTRSGIPAWAFLQAGNHLAARDGAG
GSRARYRSVSVGSRTRTADGGPDRLGVSWSAGSSGGGGARAGHDDHDDDD
DDAGTNNDRGGGRQAGASSGRGLNLFFGAGSSAALFRAGGGGGAGAGGGT
ALRMGENSAQSGSPSRLGGSEHGRRISFNSCPGSTGPAPLPPRDEGWVQQ
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING