prot_P-wetherbeei_contig10560.2.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10560.2.2
Unique Nameprot_P-wetherbeei_contig10560.2.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length490
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10560.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 416..440
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..393
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..273
NoneNo IPR availablePANTHERPTHR28637:SF1DNA REPLICATION FACTOR CDT1coord: 105..194
IPR014939CDT1 Geminin-binding domain-likeSMARTSM01075CDT1_2coord: 105..460
e-value: 2.6E-4
score: 18.8
IPR014939CDT1 Geminin-binding domain-likePFAMPF08839CDT1coord: 105..193
e-value: 1.1E-13
score: 51.6
IPR045173DNA replication factor Cdt1PANTHERPTHR28637DNA REPLICATION FACTOR CDT1coord: 105..194
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 105..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10560contigP-wetherbeei_contig10560:272..2317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10560.2.2mRNA_P-wetherbeei_contig10560.2.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10560 270..2317 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10560.2.2 ID=prot_P-wetherbeei_contig10560.2.2|Name=mRNA_P-wetherbeei_contig10560.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=490bp
GAALPSSSRVGHTGVESPMSAVGTVGGTPASARAVSTSKGQGPNLLSAEE
RLPEIEGDGDDAARYLLAMVAGDAQTEPPPLAAAAAAVREKLVVSKPADT
SSAGMLQAVFNSLESVMGLFKARREPPTLSKLKAPVERVSGKAFSRAHVD
QILNIYPGAYRLQRIPGRVDGRGRRVTPDDWLVEVPPPEEDEPDKADDGR
GDGGGNSGAVGAVKGAGDRVDGGASIKSGVAGGGGGGGSGSSGGSSGSLG
GGSTCSGASGAARSTSAAQPTLESVVRRRERLGKLLARRVDRLCTCGPST
RPSCQCPVETAVAAVTPASPSPGPAEAVLASSSPYGNGSAALPSAVGTRQ
SGSQNGGNGVANGGSSADGGTGAVNGATNDIVANESGGGSSTDNGDAVAC
GGGGGDGSGGSSGGGNAEAEDTYEAMMNRLRQREAEQQRRLQRPPEAVRT
EQLRRFELPRLADAVRSFFVSLQRSATYFDVIVDDLVRTS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014939CDT1_Gemini-bd-like
IPR045173Cdt1
IPR036390WH_DNA-bd_sf