prot_P-wetherbeei_contig1050.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1050.1.1
Unique Nameprot_P-wetherbeei_contig1050.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length254
Homology
BLAST of mRNA_P-wetherbeei_contig1050.1.1 vs. uniprot
Match: A0A4Z0A072_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A072_9AGAM)

HSP 1 Score: 137 bits (344), Expect = 4.760e-33
Identity = 94/255 (36.86%), Postives = 129/255 (50.59%), Query Frame = 0
Query:    4 DAMRFLLALAAKFRFEIHQLDVVTAYLKAVLDEELYTCAPPGV-AGFEDCLGLKLLKALYGLKQAVYLWHLCLWAWLIEEGFHSNDADCCVFV-HGTATMAAAARGNESYLVVGIHVDDLLTTGYPVSAITDFKASASKRFHMKDLGQVHNLLA-------GGCG---------------VIVTLYVAPVTPAEIATMPTTPYRELVGALLFVAVMTCPDIFNAVRGLTRFCSNPWPWLWRAAQHVLKYLKGQRK 234
             ++R L+ LAA+F +E+HQ+DV  AYL   LDEE+Y   PPG  A  ++     L K +YGLKQA   W+  L A  +  GF  +  D  VF  HG         G+E  L+  + VDDL      V+AITD K + + RF M DLG++H LL        GG G                 +T   +P TP +   M   PYRE +G+L++ A+ T PDI  AV  L++F  NP    W   + VL YLK  ++
Sbjct:  436 SSIRILVVLAARFNWELHQMDVKNAYLNGDLDEEIYMKQPPGFPAPGQEHKVCALFKPIYGLKQAGRRWYKKLCAAFLGMGFTRSSVDHSVFFRHGA--------GSEIVLIT-VSVDDLTIAATSVNAITDVKDALNARFEMTDLGKMHWLLGIKIKHDRGGGGRSRCRSPLDTALDPSFQLTTAQSPSTPQQYEEMCNVPYREAIGSLMYAALGTRPDIVYAVTTLSQFMQNPGRMHWEGTKRVLHYLKATKE 681          
BLAST of mRNA_P-wetherbeei_contig1050.1.1 vs. uniprot
Match: R7QP77_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QP77_CHOCR)

HSP 1 Score: 129 bits (325), Expect = 1.810e-30
Identity = 84/230 (36.52%), Postives = 125/230 (54.35%), Query Frame = 0
Query:    6 MRFLLALAAKFRFEIHQLDVVTAYLKAVLDEELYTCAPPG-VAGFEDCLGLKLLKALYGLKQAVYLWHLCLWAWLIEE-GFHSNDADCCVFVHGTATMAAAARGNESYLVVGIHVDDLLTTGYPVSAITDFKASASKRFHMKDLGQVHNLLAGGCGVIVTLYVAPVTPAEIATMPTTPYRELVGALLFVAVMTCPDIFNAVRGLTRFCSNPWPWLWRAAQHVLKYLKGQR 233
            +R LLAL A +  E+HQ+DVVTA+L   LDE++Y   P G +   +     KLLKALY LKQA   WH  +  +LI E GF ++ +D C+F+          R   + +++ ++VDDLL  G  + AI   K   +KRF MKDLG+   +  G    I T         E  +    PYRE VG+L+++ V T PD+  A+  L++  +NP    W   + V++Y++G R
Sbjct:  783 IRLLLALVAHYDLELHQMDVVTAFLNGDLDEDIYMEQPEGCIDKSKSDHVCKLLKALYDLKQAHRQWHAKVNDFLIGELGFETSRSDPCLFIK---------RIGNTIMLIALYVDDLLLAGSDIDAIKWMKGELNKRFEMKDLGKA-KVCIGHTTTIST---------ENDSETNVPYREAVGSLMYLMVGTRPDLAYAIGKLSQHSANPCESHWAGVKRVMRYVQGTR 993          
BLAST of mRNA_P-wetherbeei_contig1050.1.1 vs. uniprot
Match: S0F301_CHOCR (RNA-dependent DNA polymerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F301_CHOCR)

HSP 1 Score: 126 bits (317), Expect = 2.180e-29
Identity = 88/266 (33.08%), Postives = 130/266 (48.87%), Query Frame = 0
Query:    6 MRFLLALAAKFRFEIHQLDVVTAYLKAVLDEELYTCAPPG-VAGFEDCLGLKLLKALYGLKQAVYLWHLCLWAWLIEE-GFHSNDADCCVFVHGTATMAAAARGNESYLVVGIHVDDLLTTGYPVSAITDFKASASKRFHMKDLGQVHNLLAGGCGVIVTLYVAPVTPAEIA-------------------------TMPTT-----------PYRELVGALLFVAVMTCPDIFNAVRGLTRFCSNPWPWLWRAAQHVLKYLKGQR 233
            +R LLAL A F  E+HQ+DVVTA+L   L EE+Y   P G +   +     KLLKA+YGLKQA   WH  +  +LI E GF++  +D C+++          R     +++ ++VDDLL  G  + AI   K   +KRF MKDLG+    +      I + +V  VT ++ A                         TM              PYR+ +G L+F+ V T PDI  A+  L++ C++P    W   + VL+YL+G +
Sbjct:  940 IRLLLALVAHFDLELHQMDVVTAFLNGDLHEEIYMEQPEGCIDKVKPDSVCKLLKAIYGLKQAHRQWHSKIDEFLITELGFNTTRSDPCLYIR---------RQGNVIMIIALYVDDLLLAGSDLEAILWMKNELNKRFDMKDLGEAKTCIGLEIDRIRSKHVLTVTQSKYAQAVLKRFKMSSCNPCVTPMEQSRHVTMQVAETGTDDNPCFEPYRQAIGCLMFLMVGTRPDIAYAIGKLSQHCADPHDSHWTGVKRVLRYLRGSQ 1196          
BLAST of mRNA_P-wetherbeei_contig1050.1.1 vs. uniprot
Match: A0A2N9EVE4_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EVE4_FAGSY)

HSP 1 Score: 124 bits (310), Expect = 2.620e-29
Identity = 81/228 (35.53%), Postives = 123/228 (53.95%), Query Frame = 0
Query:    5 AMRFLLALAAKFRFEIHQLDVVTAYLKAVLDEELYTCAPPG--VAGFEDCLGLKLLKALYGLKQAVYLWHLCLWAWLIEEGFHSNDADCCVFVHGTATMAAAARGNESYLVVGIHVDDLLTTGYPVSAITDFKASASKRFHMKDLGQVHNLLAGGCGVIVTLYVAPVTPAEIATMPTTPYRELVGALLFVAVMTCPDIFNAVRGLTRFCSNPWPWLWRAAQHVLKYLK 230
            ++R L+A+AA +  EIHQ+DV TA+L   LDEE+Y   P G  V G E  +  +L+K+LYGLKQA   WH      ++  GF  N+ D CV+V  T +          Y++V ++VDD+L  G     I   K   + +F MKDLG    +L    G+ +T      T   +    +   ++++G+L+++   T PDI  +V  L+R+ SNP    W+A   VL+YLK
Sbjct:  126 SIRMLIAIAALYNLEIHQMDVKTAFLNGELDEEIYMEQPEGFIVPGKEKKV-CRLVKSLYGLKQAPKQWHEKFDNAMMSNGFRINECDKCVYVKNTTS---------GYVIVCLYVDDMLIMGSNNDIIKATKRMLNSKFDMKDLGVADVIL----GIKITR-----TSDGLVLSQSHYIKKIIGSLMYIMNCTRPDIAYSVSKLSRYTSNPGEDHWKAIVRVLRYLK 334          
BLAST of mRNA_P-wetherbeei_contig1050.1.1 vs. uniprot
Match: F2U4Z4_SALR5 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U4Z4_SALR5)

HSP 1 Score: 122 bits (306), Expect = 2.680e-29
Identity = 90/259 (34.75%), Postives = 129/259 (49.81%), Query Frame = 0
Query:    2 TADAMRFLLALAAKFRFEIHQLDVVTAYLKAVLDEELYTCAPPGVAG-FEDCLGLKLLKALYGLKQAVYLWHLCLWAWLIEEGFHSNDADCCVFVHGTATMAAAARGNESYLVVGIHVDDLLTTGYPVSAITDFKASASKRFHMKDLG--------------QVHNLLAGGCGVIVTLYVAPVTPA--------------EIATMPTTPYRELVGALLFVAVMTCPDIFNAVRGLTRFCSNPWPWLWRAAQHVLKYLKG 231
            T  A+R +LA+A      + Q+DV TA+L A +D E+Y   PP V G F     L+L + LYGLKQ+  LW+  L AW+ E+ F +   D C++           +G +  + V ++VDDLL      S +  FK + SKRF MKDLG              Q H L      V+ T  +A   P               +   +P  P+REL+G+LL+ A MT PDI  AV  L+R   +     W+AA+H+L+Y+KG
Sbjct:   43 TIAAIRTMLAMAVARGMNVQQMDVNTAFLNAPVDHEIYV-QPPAVDGIFSPNTVLRLKRGLYGLKQSPRLWNHTLDAWMREQDFVATATDACIY-------RRTCKGGK-VMWVAVYVDDLLIFADSDSDMAAFKKAISKRFKMKDLGSPDICLGIKDRHMSQEHYLR----NVLETFGMADCKPVGTPLCTGYVDRPADKEEPLPDVPFRELLGSLLYAATMTRPDISAAVSMLSRRMQHFGMDHWKAAKHLLRYIKG 288          
BLAST of mRNA_P-wetherbeei_contig1050.1.1 vs. uniprot
Match: A0A6A4YX65_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YX65_9STRA)

HSP 1 Score: 124 bits (312), Expect = 5.400e-29
Identity = 88/270 (32.59%), Postives = 131/270 (48.52%), Query Frame = 0
Query:    4 DAMRFLLALAAKFRFEIHQLDVVTAYLKAVLDEELYTCAPPGV----AGFEDCLGLKLLKALYGLKQAVYLWHLCLWAWLIEEGFHSNDADCCVFVHGTATMAAAARGNESYLVVGIHVDDLLTTGYPVSAITDFKASASKRFHMKDLGQVHNLLAGG-----------------CGVIVTLY--------------VAPV-------TPAEIATMPTTPYRELVGALLFVAVMTCPDIFNAVRGLTRFCSNPWPWLWRAAQHVLKYLKG 231
            + +RFL AL A    E  Q+DV TA+L   +D  +    PPG     A   D + L L K+LYGLKQA +LW+     ++   GF     D CVF+  +          + + +V ++VDDLL      +   D K S SKRFHMKDLG V ++L                    C  ++  +                P+       TP +IA M T PYR +VG+++++A+ + PD+  A++ L++F  NP    WRAA+ VL+YL+G
Sbjct:  144 EVLRFLFALVAIHDLECEQMDVKTAFLNGKIDCVIRMEQPPGSLIDPASRRDYVCL-LQKSLYGLKQAPHLWYWTFVTFMASLGFARLHKDRCVFLKAS---------EDGFTIVSLYVDDLLIITPNKARALDLKVSLSKRFHMKDLGPVRDILGWEIARNRPNRTLFIHQSRYCSTVLDRFDMSTSKAVATPFECTTPLSKAQCASTPEDIAFMQTKPYRSIVGSIMYLAMGSRPDLAYALQQLSQFLHNPGLAHWRAAKRVLRYLRG 403          
BLAST of mRNA_P-wetherbeei_contig1050.1.1 vs. uniprot
Match: A0A4S4LBP1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LBP1_9AGAM)

HSP 1 Score: 121 bits (304), Expect = 5.600e-29
Identity = 90/271 (33.21%), Postives = 126/271 (46.49%), Query Frame = 0
Query:    5 AMRFLLALAAKFRFEIHQLDVVTAYLKAVLDEELYTCAPPGVAGFEDCLG----LKLLKALYGLKQAVYLWHLCLWAWLIEEGFHSNDADCCVFVHGTATMAAAARGNESYLVVGIHVDDLLTTGYPVSAITDFKASASKRFHMKDLGQVHNLLA-----------------------------GGCGVIVTLY---------VAPVTPAEIATMPTTPYRELVGALLFVAVMTCPDIFNAVRGLTRFCSNPWPWLWRAAQHVLKYLKGQR 233
            A+R +LALAA    E++ +D+ TA+L   LD ++Y   P G   FE+  G    LKL+KA+YGLKQA   WH  L + L   GF     D  ++V+         R  +  +++ ++VDD+             K    K F + DLG    LL                                C  + T           +AP    EIA M T PYR+LVGAL+++AV T PDI  AV  L RF SNP P  W+AA+H+ +YL+G +
Sbjct:   33 ALRAILALAALEDLELYSIDISTAFLNGDLDHDVYMDQPEG---FEEYYGAGFVLKLVKAIYGLKQAGCQWHKKLDSVLKGMGFTLVRCDNSIWVY---------RREDVRIIIPVYVDDMTIAAKSKDQDLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTK 291          
BLAST of mRNA_P-wetherbeei_contig1050.1.1 vs. uniprot
Match: A0A642V7T2_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642V7T2_9ASCO)

HSP 1 Score: 120 bits (301), Expect = 1.370e-28
Identity = 92/267 (34.46%), Postives = 128/267 (47.94%), Query Frame = 0
Query:    4 DAMRFLLALAAKFRFEIHQLDVVTAYLKAVLDEELYTCAPPGVAGF--EDCLGLKLLKALYGLKQAVYLWHLCLWAWLIEEGFHSNDADCCVFVHGTATMAAAARGNESYLVVGIHVDDLLTTGYPVSAITDFKASASKRFHMKDLGQVHNLLAGGC-----GVIVTL----YV------APVTPAEIATMPT------------------TPYRELVGALLFVAVMTCPDIFNAVRGLTRFCSNPWPWLWRAAQHVLKYLKGQRKR 235
            +++RFLLALAA+F  +IHQ+DV TA+L   LDEE+Y   P G  GF  E     +L K+LYGLKQA   W+  +   L++ GF  N+A+  ++         + R    ++  G  VDDLL        + D K    KRF +KDLG +   L            VT+    Y+        +  A+I+  PT                  + YR LVG  L+VAV    D    V  L+R+ S P    W AA+HVL+YLKG + R
Sbjct:   69 ESVRFLLALAAQFECDIHQMDVDTAFLNGELDEEIYMELPKGF-GFDKESEKVCRLKKSLYGLKQAPLYWYTVVKKALMDMGFEVNNAENGIY---------SKRTGGKFVAAGFFVDDLLCIANNAKLLQDTKTLLKKRFKIKDLGSISKFLGVRIKQDPKSKAVTMDHEQYINELLKELDLPEAKISPCPTWNGMNIDDCDNSPLLSDGSQYRSLVGKFLWVAVSMRADTAFEVSHLSRYLSCPRECHWTAAKHVLRYLKGSKSR 325          
BLAST of mRNA_P-wetherbeei_contig1050.1.1 vs. uniprot
Match: A0A4S4KQ60_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KQ60_9AGAM)

HSP 1 Score: 122 bits (307), Expect = 3.110e-28
Identity = 90/271 (33.21%), Postives = 126/271 (46.49%), Query Frame = 0
Query:    5 AMRFLLALAAKFRFEIHQLDVVTAYLKAVLDEELYTCAPPGVAGFEDCLG----LKLLKALYGLKQAVYLWHLCLWAWLIEEGFHSNDADCCVFVHGTATMAAAARGNESYLVVGIHVDDLLTTGYPVSAITDFKASASKRFHMKDLGQVHNLLA-----------------------------GGCGVIVTLY---------VAPVTPAEIATMPTTPYRELVGALLFVAVMTCPDIFNAVRGLTRFCSNPWPWLWRAAQHVLKYLKGQR 233
            A+R +LALAA    E++ +D+ TA+L   LD ++Y   P G   FE+  G    LKL+KA+YGLKQA   WH  L + L   GF     D  ++V+         R  +  +++ ++VDD+             K    K F + DLG    LL                                C  + T           +AP    EIA M T PYR+LVGAL+++AV T PDI  AV  L RF SNP P  W+AA+H+ +YL+G +
Sbjct:  199 ALRAILALAALEDLELYSIDISTAFLNGDLDHDVYMDQPEG---FEEYYGAGFVLKLVKAIYGLKQAGRQWHKKLDSVLKGMGFTLVRCDNSIWVY---------RREDVRIIIPVYVDDMTIAAKSKDQYLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKCLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTK 457          
BLAST of mRNA_P-wetherbeei_contig1050.1.1 vs. uniprot
Match: A0A4T9WAI5_9FIRM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Bacteria TaxID=2 RepID=A0A4T9WAI5_9FIRM)

HSP 1 Score: 122 bits (306), Expect = 3.700e-28
Identity = 79/268 (29.48%), Postives = 131/268 (48.88%), Query Frame = 0
Query:    5 AMRFLLALAAKFRFEIHQLDVVTAYLKAVLDEELYTCAPPG-VAGFEDCLGLKLLKALYGLKQAVYLWHLCLWAWLIEEGFHSNDADCCVFVHGTATMAAAARGNESYLVVGIHVDDLLTTGYPVSAITDFKASASKRFHMKDLGQVHNLLA---------GGCGVIVTLYVAPV-------------TPAEIA----------------TMPTTPYRELVGALLFVAVMTCPDIFNAVRGLTRFCSNPWPWLWRAAQHVLKYLKGQR 233
            ++R LL+LAAK++  +HQ+DV TA+L  +LDE++Y   P G V G       +L ++LYGLKQ+  +W+  +  ++++ GF   ++D C+++          R N   + V ++VDDL+        + D K + S RF M D+GQ+   L          G   V  T +   +             TP +                  TM   PYR  VG L+++ V T PD+  AV  L++F ++P P  W+A + V +Y++G +
Sbjct:  161 SIRVLLSLAAKYKLTVHQMDVKTAFLNGLLDEDIYMAQPDGYVDGDRPDYVCRLKRSLYGLKQSPRMWNKTIDEFMLKLGFKKCESDHCIYLK---------RDNHDMMFVALYVDDLVLASSSDRMLKDTKQALSDRFEMTDMGQLKYFLGMEIEQDVATGKVSVRQTKFAKDILEKFKMDESNPVKTPQDPGLKLTKAMCEGGCKHDETMANVPYRNAVGCLMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIRGTK 419          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1050.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Z0A072_9AGAM4.760e-3336.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
R7QP77_CHOCR1.810e-3036.52Integrase catalytic domain-containing protein n=2 ... [more]
S0F301_CHOCR2.180e-2933.08RNA-dependent DNA polymerase n=1 Tax=Chondrus cris... [more]
A0A2N9EVE4_FAGSY2.620e-2935.53Reverse transcriptase Ty1/copia-type domain-contai... [more]
F2U4Z4_SALR52.680e-2934.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A4YX65_9STRA5.400e-2932.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4LBP1_9AGAM5.600e-2933.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A642V7T2_9ASCO1.370e-2834.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4KQ60_9AGAM3.110e-2833.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4T9WAI5_9FIRM3.700e-2829.48Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 4..154
e-value: 2.1E-30
score: 106.1
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 7..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1050contigP-wetherbeei_contig1050:2851..3718 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1050.1.1mRNA_P-wetherbeei_contig1050.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1050 2644..4188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1050.1.1 ID=prot_P-wetherbeei_contig1050.1.1|Name=mRNA_P-wetherbeei_contig1050.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=254bp
MTADAMRFLLALAAKFRFEIHQLDVVTAYLKAVLDEELYTCAPPGVAGFE
DCLGLKLLKALYGLKQAVYLWHLCLWAWLIEEGFHSNDADCCVFVHGTAT
MAAAARGNESYLVVGIHVDDLLTTGYPVSAITDFKASASKRFHMKDLGQV
HNLLAGGCGVIVTLYVAPVTPAEIATMPTTPYRELVGALLFVAVMTCPDI
FNAVRGLTRFCSNPWPWLWRAAQHVLKYLKGQRKRACCTAVTLQLSAAAR
LVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2