prot_P-wetherbeei_contig10468.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10468.1.2
Unique Nameprot_P-wetherbeei_contig10468.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length189
Homology
BLAST of mRNA_P-wetherbeei_contig10468.1.2 vs. uniprot
Match: A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 9.670e-32
Identity = 79/195 (40.51%), Postives = 110/195 (56.41%), Query Frame = 0
Query:    1 MVDRTTEFNGAVRIFQKAAASANGTPP------KEERHTAPPGDFTTAAANVAVGFQGTMKLIERLRKLVGRKGLSNDPTVEIGEVAGFFKGDMATLQTELTALQRSLRPCGDPFRYALPFLVRTLPASTSGRYADGCAAQSPPANTQRQKHCQCVCAALRKTAELQMRAFQEALQQRTAILRQQNERRKHFSHT 189
            M DRT EF+GAV  F+    + N +        + +       +F   AA+VAVGF+GT +LI RL+KLVGRKG SN+P  EI +V   F+GDMA LQ ++++LQR                           YADG    SPPAN+QRQ HC  +   LR++A+   +AF++AL  R A+ +QQNER++ FSH+
Sbjct:    3 MTDRTKEFHGAVSAFRPTVTAVNNSGEAALIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQR---------------------------YADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALMLRAAVEKQQNERQRKFSHS 170          
BLAST of mRNA_P-wetherbeei_contig10468.1.2 vs. uniprot
Match: A0A835Z5V3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V3_9STRA)

HSP 1 Score: 117 bits (292), Expect = 8.410e-30
Identity = 76/190 (40.00%), Postives = 110/190 (57.89%), Query Frame = 0
Query:    1 MVDRTTEFNGAVRIFQKAAASANGTPPKEERHTAP-PGDFTTAAANVAVGFQGTMKLIERLRKLVGRKGLSNDPTVEIGEVAGFFKGDMATLQTELTALQRSLRPCGDPFRYALPFLVRTLPASTSGRYADGCAAQSPPANTQRQKHCQCVCAALRKTAELQMRAFQEALQQRTAILRQQNERRKHFSHT 189
            M+DRT EF G +R+  +     +G P +  ++ AP P DFT A + +A+  +GT KLIE+L +LVGRKG SNDPT+EI +V+  FKGDM  +Q EL+ALQ  +                      SG+        +P   +QR KH   +  AL++ A+ Q+ AFQ AL+QR A++R+ N+RRK +S T
Sbjct:    1 MIDRTAEFQGCIRVLHQH----DGRPDQRPQYEAPQPTDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFID-------------------GRSGKRG------APAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTT 161          
BLAST of mRNA_P-wetherbeei_contig10468.1.2 vs. uniprot
Match: A0A4D9CWV4_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV4_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.650e-24
Identity = 80/203 (39.41%), Postives = 107/203 (52.71%), Query Frame = 0
Query:    1 MVDRTTEFNGAVRIFQKAAASANGTPPKEERH-----------TAPP---GDFTTAAANVAVGFQGTMKLIERLRKLVGRKGLSNDPTVEIGEVAGFFKGDMATLQTELTALQRSLRPCGDPFRYALPFLVRTLPASTSGRYADGCAAQSPPANTQRQKHCQCVCAALRKTAELQMRAFQEALQQRTAILRQQNERRKHFSHT 189
            M+DR+ EF G +++F          PP+E+             TAPP    DF  AAA +A G+ GT +L++RL++LV RKG+ NDPT EI +V   FK D+A LQ ++ +L   LR  G  +R A     R       G    GC  Q      QR +HC CV   LR  A    RAFQ ALQ R  IL++Q +RRK F+H+
Sbjct:    1 MMDRSREFQGLLKLF-----GITDLPPEEDESDPFEPFPSPTSTAPPPSTSDFGLAAARIAQGYSGTWRLVQRLQRLVTRKGMHNDPTAEIEDVTAVFKKDLAGLQGDIESL---LRHAGRHYRLAGVDGGRKDNVDR-GHEKGGCHDQ------QRHRHCTCVVDTLRTRAGEHARAFQAALQTRQHILQEQADRRKRFTHS 188          
BLAST of mRNA_P-wetherbeei_contig10468.1.2 vs. uniprot
Match: C4JWS7_UNCRE (t-SNARE coiled-coil homology domain-containing protein n=5 Tax=Onygenaceae TaxID=33184 RepID=C4JWS7_UNCRE)

HSP 1 Score: 54.3 bits (129), Expect = 2.260e-5
Identity = 36/106 (33.96%), Postives = 50/106 (47.17%), Query Frame = 0
Query:    3 DRTTEFNGAVRIFQKAAASANGTP-------PKEERHTAPP--GDFTTAAANVAVGFQGTMKLIERLRKLVGRKGLSNDPTVEIGEVAGFFKGDMATLQTELTALQ 99
            DRTTEF   +   QK  AS+           P       PP   +F   AA +  G   T   ++RL +L  +K L +D  VEI E+    K D+A+L T++ ALQ
Sbjct:    8 DRTTEFRSILGQAQKRLASSKADVHRQTLLRPDTSPQNGPPRKSEFARRAAEIGRGITATTAKLQRLAQLAKKKSLFDDRPVEISELTYVIKQDLASLNTQIAALQ 113          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10468.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KU27_9PHAE9.670e-3240.51t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z5V3_9STRA8.410e-3040.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A4D9CWV4_9STRA1.650e-2439.41t-SNARE coiled-coil homology domain-containing pro... [more]
C4JWS7_UNCRE2.260e-533.96t-SNARE coiled-coil homology domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.70coord: 36..189
e-value: 7.3E-6
score: 27.7
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 37..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10468contigP-wetherbeei_contig10468:218..1071 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10468.1.2mRNA_P-wetherbeei_contig10468.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10468 218..1071 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10468.1.2 ID=prot_P-wetherbeei_contig10468.1.2|Name=mRNA_P-wetherbeei_contig10468.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=189bp
MVDRTTEFNGAVRIFQKAAASANGTPPKEERHTAPPGDFTTAAANVAVGF
QGTMKLIERLRKLVGRKGLSNDPTVEIGEVAGFFKGDMATLQTELTALQR
SLRPCGDPFRYALPFLVRTLPASTSGRYADGCAAQSPPANTQRQKHCQCV
CAALRKTAELQMRAFQEALQQRTAILRQQNERRKHFSHT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010989SNARE