prot_P-wetherbeei_contig10403.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10403.1.1
Unique Nameprot_P-wetherbeei_contig10403.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length433
Homology
BLAST of mRNA_P-wetherbeei_contig10403.1.1 vs. uniprot
Match: A0A7S2DU63_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DU63_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.060e-31
Identity = 62/124 (50.00%), Postives = 82/124 (66.13%), Query Frame = 0
Query:  253 RHFPLCMRVMWQALAERHHLKYRGRLQLLLFLRGCGLPVADAVALWRRELQRRLGEATYRKKGYEYSVRHLYGLEGSGRQASLYSCDKMISDGPPPTPEHVHGCPFAHAAPSTLRAALASSGLP 376
            RHFPLC RV ++ L ++H LKY  R+QL+LFL+G GLPV + + LWR E +R +    Y KK YEYS+RHLYGLEG  +  S YSC ++I  GPP   +H +GCP+AH     L + L S  +P
Sbjct:  182 RHFPLCARVTFKKLRQQHRLKYEARMQLVLFLKGVGLPVDEVLQLWRSEFRRVMTPDEYHKKKYEYSIRHLYGLEGKRKDYSPYSCQQIIQKGPPRNSDHDYGCPWAHGTREMLESLLESFPMP 305          
BLAST of mRNA_P-wetherbeei_contig10403.1.1 vs. uniprot
Match: A0A7C9DN53_OPUST (DNA primase DnaG n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DN53_OPUST)

HSP 1 Score: 115 bits (287), Expect = 1.920e-24
Identity = 90/294 (30.61%), Postives = 138/294 (46.94%), Query Frame = 0
Query:   93 VSEVLESLG---EREGACCLRCPWQRASALVSLRKARLRGGHAFFAARHLPIVLATEFRRRLRGAVDVAARASPGFLRDERVAEALADVRRAVAAYLTNFGARGADEGASAGLPPLTLAALDGSGRGGDGHXXXXXXXXXXXXXXXXXXXSGGHVAATAAAVLRHFPLCMRVMWQALAERHHLKYRGRLQLLLFLRGCGLPVADAVALWRRELQRRLGEATYRKKGYEYSVRHLYGLEGSGRQASLYSCDKMISDGPPPTPEHVHGCPFAHAAPSTLRAALASSGLPAADIEDV 383
            +S+V  SLG       A   + P++    LV+ RK  +  GHA+ A   +  ++ T+FR  L  A+ +  R     +RD+        V     +YL      G D         ++L  +D                                VA ++      FPLCMR +++ L E HHL+Y GR+QL LFL+G GL + DA+A W+ E  +++G   + K+ Y YS+RH +G EG     + YSC K+IS   P   +H HGCP+ H +   LRAAL+  G+ +  ++DV
Sbjct:  147 LSQVARSLGLSPPSGDAIFYKVPFEEVPELVAGRKVYIHKGHAYVAMNQVVSLVVTQFRSNLSKALILTNRKWTSMVRDQEKNRLTPIVEALSTSYL------GPDYSEPKEFAEISLKDID-------------------------------RVANSS------FPLCMRHLFEKLREDHHLRYGGRMQLGLFLKGVGLNLDDALAFWKSEFSKKVGPERFDKE-YAYSIRHSFGKEGKRVDYTPYSCQKIISS-TPGVGDH-HGCPYRHFSEDNLRAALSKMGVNSRAMDDV 394          
BLAST of mRNA_P-wetherbeei_contig10403.1.1 vs. uniprot
Match: UPI00053F5DAD (probable DNA primase large subunit n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F5DAD)

HSP 1 Score: 113 bits (282), Expect = 1.000e-23
Identity = 60/129 (46.51%), Postives = 82/129 (63.57%), Query Frame = 0
Query:  255 FPLCMRVMWQALAERHHLKYRGRLQLLLFLRGCGLPVADAVALWRRELQRRLGEATYRKKGYEYSVRHLYGLEGSGRQASLYSCDKMISDGPPPTPEHVHGCPFAHAAPSTLRAALASSGLPAADIEDV 383
            FPLCMR ++  L E HHLKY GR+QL LFL+G GL + DA+A W+ E  +++G   + K+ Y YS+RH YG EG     + YSC K+IS   P   +H HGCP+ H +   LRAAL + G+ +  + DV
Sbjct:  277 FPLCMRHLFDKLREDHHLKYGGRMQLGLFLKGVGLTLDDALAFWKSEFSKKVGPERFDKE-YAYSIRHSYGKEGKRVDYTAYSCQKVISS-TPGVGDH-HGCPYRHFSEDNLRAALCNMGVSSRAMTDV 402          
BLAST of mRNA_P-wetherbeei_contig10403.1.1 vs. uniprot
Match: UPI000B78567C (probable DNA primase large subunit n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B78567C)

HSP 1 Score: 112 bits (281), Expect = 1.360e-23
Identity = 60/129 (46.51%), Postives = 83/129 (64.34%), Query Frame = 0
Query:  255 FPLCMRVMWQALAERHHLKYRGRLQLLLFLRGCGLPVADAVALWRRELQRRLGEATYRKKGYEYSVRHLYGLEGSGRQASLYSCDKMISDGPPPTPEHVHGCPFAHAAPSTLRAALASSGLPAADIEDV 383
            FPLCMR +++ L E HHLKY GR+QL LFL+G GL + DA+A W+ E  +++G   + K+ Y YS+RH YG EG     + YSC K+IS   P   +H HGCP+ H +   LRAAL+  G+ +  + DV
Sbjct:  277 FPLCMRHLFEKLREDHHLKYGGRMQLGLFLKGVGLTLDDALAFWKSEFSKKVGAERFDKE-YAYSIRHSYGKEGKRVDYTPYSCQKVISS-TPGVGDH-HGCPYRHFSEDNLRAALSKMGVNSRAMTDV 402          
BLAST of mRNA_P-wetherbeei_contig10403.1.1 vs. uniprot
Match: A0A8H3G4B0_9LECA (DNA primase large subunit n=1 Tax=Gomphillus americanus TaxID=1940652 RepID=A0A8H3G4B0_9LECA)

HSP 1 Score: 113 bits (282), Expect = 1.550e-23
Identity = 85/291 (29.21%), Postives = 130/291 (44.67%), Query Frame = 0
Query:   90 AAFVSEVLESLGEREGACCLRCPWQRASALVSLRKARLRGGHAFFAARHLPIVLATEFRRRLRGAVDVAARASPGFLRDERVAEALADVRRAVAAYLTNFGARGADEGASAGLPPLTLAALDGSGRGGDGHXXXXXXXXXXXXXXXXXXXSGGHVAATAAAVLRHFPLCMRVMWQALAERHHLKYRGRLQLLLFLRGCGLPVADAVALWRRELQRRLGEATYRKKGYEYSVRHLYGLEGS-----GRQASLYSCDKMISDGPPPTPEHVHGCPFAHAAPSTLRAALASSGL 375
            A  ++ V+    + E     +  W+R   LV  RK  LR G A+  AR    ++  EF  RL  A++  ARA P    D+R+   L  + ++ A       A  AD   +    P+T + +D   R                                     +HFP+CM+ +   L +  HLKY GRLQ  LFL+G GL + + +  WR+  + +  +     K Y Y+V+H YG  G      G+  S YSC K+++D PP  P   HGCP+ H AP +L + L ++G+
Sbjct:  179 AEQLAAVVPRRSDLEDGFWFKVDWERVPELVQERKVFLRRGKAYVPAREQISMVVAEFTTRLEKALEQTARALPRMDEDDRLMPILDHISKSFAMP----DAALADAETAVPGAPITHSTIDTLAR-------------------------------------QHFPMCMKHLHNTLRKDSHLKYSGRLQYTLFLKGIGLSLEECLVFWRQSFKNKTDDQF--NKEYSYNVKHSYGEVGGDANRRGKGYSPYSCQKILTDAPP-GPGQAHGCPYKHFAPDSLSSLLQANGV 425          
BLAST of mRNA_P-wetherbeei_contig10403.1.1 vs. uniprot
Match: G5DWJ1_SILLA (DNA primase large subunit (Fragment) n=2 Tax=Silene latifolia TaxID=37657 RepID=G5DWJ1_SILLA)

HSP 1 Score: 112 bits (280), Expect = 1.800e-23
Identity = 62/129 (48.06%), Postives = 81/129 (62.79%), Query Frame = 0
Query:  255 FPLCMRVMWQALAERHHLKYRGRLQLLLFLRGCGLPVADAVALWRRELQRRLGEATYRKKGYEYSVRHLYGLEGSGRQASLYSCDKMISDGPPPTPEHVHGCPFAHAAPSTLRAALASSGLPAADIEDV 383
            FPLCMR +++ L E HHLKY GR+QL LFL+G GL + DA+A WR E  ++LG   + K+ Y YS+RH YG EG     + YSC K+IS   P   +H HGCPF H +   LRAA    G+ +  + DV
Sbjct:  275 FPLCMRHLFEKLREDHHLKYGGRMQLGLFLKGVGLKLDDALAFWRSEFSKKLGPERFDKE-YSYSIRHSYGKEGKRVDYTPYSCQKVISC-TPGVGDH-HGCPFRHFSDENLRAAFNKMGVNSRAMVDV 400          
BLAST of mRNA_P-wetherbeei_contig10403.1.1 vs. uniprot
Match: A0A803L1A8_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803L1A8_CHEQI)

HSP 1 Score: 111 bits (278), Expect = 2.630e-23
Identity = 59/129 (45.74%), Postives = 82/129 (63.57%), Query Frame = 0
Query:  255 FPLCMRVMWQALAERHHLKYRGRLQLLLFLRGCGLPVADAVALWRRELQRRLGEATYRKKGYEYSVRHLYGLEGSGRQASLYSCDKMISDGPPPTPEHVHGCPFAHAAPSTLRAALASSGLPAADIEDV 383
            FPLCMR +++ L E HHLKY GR+QL LFL+G GL + DA+  W+ E  +++G   + K+ Y YS+RH YG EG     + YSC K+IS   P   +H HGCP+ H +   LRAAL+  G+ +  + DV
Sbjct:  215 FPLCMRHLFEKLREDHHLKYGGRMQLGLFLKGVGLTLDDALVFWKSEFSKKVGAERFDKE-YAYSIRHSYGKEGKRVDYTPYSCQKVISS-TPGVGDH-HGCPYRHFSEDNLRAALSKMGVSSRAMTDV 340          
BLAST of mRNA_P-wetherbeei_contig10403.1.1 vs. uniprot
Match: A0A3Q2Q406_FUNHE (DNA primase large subunit n=3 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2Q406_FUNHE)

HSP 1 Score: 106 bits (265), Expect = 2.660e-21
Identity = 75/258 (29.07%), Postives = 117/258 (45.35%), Query Frame = 0
Query:  110 RCPWQRASALVSLRKARLRGGHAFFAARHLPIVLATEFRRRLRGAVDVAARASPGFLRDERVAEALADVRRAVAAYLTNFGARGADEGASAGLPPLTLAALDGSGRGGDGHXXXXXXXXXXXXXXXXXXXSGGHVAATAAAVLRHFPLCMRVMWQALAERHHLKYRGRLQLLLFLRGCGLPVADAVALWRRELQRRLGEATYRKKGYEYSVRHLYGLEGSGRQASLYSCDKMISDGPPPTPEHVHGCPFAHAAPSTLR 367
            + P+Q A  LV  RK  L+ G+A+     +  ++  +FR RL  A+ + AR+ P    DER+   L  +  +   Y       G D      +  ++L  +D                                     +   + FPLCMR + +AL E HHL+Y GR+Q  LFL+G GL +  A+  W+ E  +   +A    K + Y++RH++G EG     + YSC K+I   PP   ++ HGCPF H+ P  L+
Sbjct:  180 KVPFQDALDLVRTRKVYLKEGYAYIPQSEIVAIVLNDFRTRLSKALALTARSLPAVHSDERLQPLLNHLSHS---YF------GQDYSGQKNVGKISLEQID-------------------------------------SLAGKSFPLCMRQLHKALRENHHLRYGGRMQYGLFLKGIGLSLEQALQFWKMEFIQGKVDADKFDKAFAYNIRHMFGKEGKRADYTPYSCMKVILSNPPSQGDY-HGCPFRHSDPELLK 390          
BLAST of mRNA_P-wetherbeei_contig10403.1.1 vs. uniprot
Match: A0A1I8MT64_MUSDO (DNA primase large subunit n=1 Tax=Musca domestica TaxID=7370 RepID=A0A1I8MT64_MUSDO)

HSP 1 Score: 106 bits (265), Expect = 3.320e-21
Identity = 56/132 (42.42%), Postives = 82/132 (62.12%), Query Frame = 0
Query:  253 RHFPLCMRVMWQALAERHHLKYRGRLQLLLFLRGCGLPVADAVALWRRELQRRLGEATYRKKGYEYSVRHLYGLEGSGRQASLYSCDKMISDGPPPTPEHVHGCPFAHAAPSTLRAALASSGLPAADIEDVA 384
            + FPLCMR+  + L   HHLKY GR+Q  LFL+G G+ + DA+  WR EL +++    +  K Y+Y++ H YG +GS +  + YSC K+I +        V+GCPF +   STL+  LA++GL  A I+DVA
Sbjct:  299 KSFPLCMRLCHEHLRTNHHLKYDGRMQYGLFLKGIGVTLEDAIRFWREELTKKMDPEKF-AKSYQYNIEHNYGKKGSLKDYAPYSCAKVIQENV--VQGSVNGCPFKYYDQSTLKQKLAAAGLGTAHIQDVA 427          
BLAST of mRNA_P-wetherbeei_contig10403.1.1 vs. uniprot
Match: A0A2D4C5G5_PYTIN (DNA primase large subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5G5_PYTIN)

HSP 1 Score: 105 bits (263), Expect = 3.880e-21
Identity = 54/115 (46.96%), Postives = 74/115 (64.35%), Query Frame = 0
Query:  256 PLCMRVMWQALAERHHLKYRGRLQLLLFLRGCGLPVADAVALWRRELQRRLGEATYRKKGYEYSVRHLYGLEGSGRQASLYSCDKMISDGPPPTPEHVHGCPFAHAAPSTLRAAL 370
            PLCMR + +AL   HHL++ GR QL LFL+G GL + DA+A WR+E  +++    + KK Y Y++RH YG EG  +    Y+C ++I+  PP T E+ HGCPF HA    LR AL
Sbjct:  290 PLCMRTLHKALKVNHHLRFAGRQQLGLFLKGTGLQLDDAIAFWRQEFCKKMSVDDFNKK-YAYNIRHNYGKEGKRKDYVPYNCMRLITGEPPKTGEY-HGCPFRHADEEHLRKAL 402          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10403.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2DU63_9STRA4.060e-3150.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7C9DN53_OPUST1.920e-2430.61DNA primase DnaG n=1 Tax=Opuntia streptacantha Tax... [more]
UPI00053F5DAD1.000e-2346.51probable DNA primase large subunit n=1 Tax=Beta vu... [more]
UPI000B78567C1.360e-2346.51probable DNA primase large subunit n=2 Tax=Chenopo... [more]
A0A8H3G4B0_9LECA1.550e-2329.21DNA primase large subunit n=1 Tax=Gomphillus ameri... [more]
G5DWJ1_SILLA1.800e-2348.06DNA primase large subunit (Fragment) n=2 Tax=Silen... [more]
A0A803L1A8_CHEQI2.630e-2345.74Uncharacterized protein n=1 Tax=Chenopodium quinoa... [more]
A0A3Q2Q406_FUNHE2.660e-2129.07DNA primase large subunit n=3 Tax=Fundulus heteroc... [more]
A0A1I8MT64_MUSDO3.320e-2142.42DNA primase large subunit n=1 Tax=Musca domestica ... [more]
A0A2D4C5G5_PYTIN3.880e-2146.96DNA primase large subunit n=1 Tax=Pythium insidios... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.930.80coord: 90..177
e-value: 4.4E-8
score: 34.6
NoneNo IPR availablePIRSRPIRSR009449-1PIRSR009449-1coord: 248..386
e-value: 9.1E-42
score: 141.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..239
IPR007238DNA primase large subunit, eukaryotic/archaealPFAMPF04104DNA_primase_lrgcoord: 248..386
e-value: 4.9E-37
score: 127.8
IPR007238DNA primase large subunit, eukaryotic/archaealPANTHERPTHR10537DNA PRIMASE LARGE SUBUNITcoord: 103..387

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10403contigP-wetherbeei_contig10403:82..1587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10403.1.1mRNA_P-wetherbeei_contig10403.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10403 82..1589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10403.1.1 ID=prot_P-wetherbeei_contig10403.1.1|Name=mRNA_P-wetherbeei_contig10403.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=433bp
VILWRQRLALRLGAIDDVRSAIEAYGVGAWLAVVEVLSQPPPPAQPPHLG
AGIENLSGLSPVMQGSQRRRKRGDDDDDCGCDGGGGVIDAAFVSEVLESL
GEREGACCLRCPWQRASALVSLRKARLRGGHAFFAARHLPIVLATEFRRR
LRGAVDVAARASPGFLRDERVAEALADVRRAVAAYLTNFGARGADEGASA
GLPPLTLAALDGSGRGGDGHGGGHGGGNSSGSGGAGTGSSGGHVAATAAA
VLRHFPLCMRVMWQALAERHHLKYRGRLQLLLFLRGCGLPVADAVALWRR
ELQRRLGEATYRKKGYEYSVRHLYGLEGSGRQASLYSCDKMISDGPPPTP
EHVHGCPFAHAAPSTLRAALASSGLPAADIEDVAAAAGGGSGGAERRGGA
GGGGGGGSCGQACAQDACRLHFERLQRDTGIGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007238DNA_primase_lsu_euk/arc