prot_P-wetherbeei_contig10381.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10381.2.1
Unique Nameprot_P-wetherbeei_contig10381.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length179
Homology
BLAST of mRNA_P-wetherbeei_contig10381.2.1 vs. uniprot
Match: A0A7S2RDC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RDC6_9STRA)

HSP 1 Score: 275 bits (703), Expect = 1.540e-88
Identity = 134/186 (72.04%), Postives = 148/186 (79.57%), Query Frame = 0
Query:    1 LPEWACKFCGIHDPACVVKCVDTGKWFCNSCGSASGSHIVSHLV-------CTHPDSPLGETVLECYNCGSRNVFLMGFVPATADAVVVLLCRVCVEGVPALKDMGWDLNEWLPLIQDRRFLPWLVKVPTEQQQLRARQISAAQIARLEERWKADPGAALEDLDRPGGGADGAGGEAPQPVLLKYE 179
            +PEWAC+FCGI DPACVVKCV+ GKWFCNSCGS SGSHI+ HLV         H +SPLGET LECYNCG RNVFL+GFVPA AD+VVV+LCRVCVE V +LK+MGWDL EWLPLI DRR L WLVKVPTEQQQLRARQISAAQI +LEE WK DP A L DLD+PG   D    +  QPVL+KYE
Sbjct:  158 VPEWACRFCGISDPACVVKCVEDGKWFCNSCGSTSGSHIIHHLVRAKYNQVALHEESPLGETTLECYNCGCRNVFLLGFVPAKADSVVVVLCRVCVESVGSLKEMGWDLKEWLPLISDRRLLSWLVKVPTEQQQLRARQISAAQINKLEELWKDDPEATLADLDKPG--VD----DELQPVLMKYE 337          
BLAST of mRNA_P-wetherbeei_contig10381.2.1 vs. uniprot
Match: D7FN00_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN00_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 1.870e-86
Identity = 136/185 (73.51%), Postives = 153/185 (82.70%), Query Frame = 0
Query:    2 PEWACKFCGIHDPACVVKCVDTGKWFCNSCGSASGSHIVSHLV-------CTHPDSPLGETVLECYNCGSRNVFLMGFVPATADAVVVLLCRVCVEGVPALKDMGWDLNEWLPLIQDRRFLPWLVKVPTEQQQLRARQISAAQIARLEERWKADPGAALEDLDRPGGGADGAGGEAPQPVLLKYE 179
            PEWAC+FCGIHDPACVV+CV++GK    SCG+ASGSHI+ HLV       C HPDSPLGET+LECYNCGSRN+FLMGFVPA AD+VVVLLCRVCVEG P LKDMGWDL+EWLPL+QDRRFLPWLVKVP+EQQQ RAR IS+AQIA+LEE W  +P A LEDL++PG        EA QPVLLKYE
Sbjct:  151 PEWACRFCGIHDPACVVRCVESGKXXXXSCGNASGSHIIQHLVRSRNNQVCLHPDSPLGETILECYNCGSRNLFLMGFVPAKADSVVVLLCRVCVEGAPGLKDMGWDLSEWLPLVQDRRFLPWLVKVPSEQQQSRARHISSAQIAKLEELWNKEPEATLEDLEKPG-----IDDEA-QPVLLKYE 329          
BLAST of mRNA_P-wetherbeei_contig10381.2.1 vs. uniprot
Match: A0A6H5L258_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L258_9PHAE)

HSP 1 Score: 277 bits (708), Expect = 3.200e-84
Identity = 132/184 (71.74%), Postives = 148/184 (80.43%), Query Frame = 0
Query:    3 EWACKFCGIHDPACVVKCVDTGKWFCNSCGSASGSHIVSHLV-------CTHPDSPLGETVLECYNCGSRNVFLMGFVPATADAVVVLLCRVCVEGVPALKDMGWDLNEWLPLIQDRRFLPWLVKVPTEQQQLRARQISAAQIARLEERWKADPGAALEDLDRPGGGADGAGGEAPQPVLLKYE 179
            EWAC+FCGIHDPACVV+CV++GKWFCNSCG+ASGSHI+ HLV       C HPDSPLGET+LECYNCGSRN+FLMGFVPA AD+VVVLLCRVCVEG P LKDMGWDL+EWLPL+QDRRFLPWLVKVP+EQQQ          IA+LEE W  +P A LEDL++PG        EA QPVLLKYE
Sbjct:  139 EWACRFCGIHDPACVVRCVESGKWFCNSCGNASGSHIIQHLVRSRNNQVCLHPDSPLGETILECYNCGSRNLFLMGFVPAKADSVVVLLCRVCVEGAPGLKDMGWDLSEWLPLVQDRRFLPWLVKVPSEQQQ----------IAKLEELWNKEPEATLEDLEKPG-----IDDEA-QPVLLKYE 306          
BLAST of mRNA_P-wetherbeei_contig10381.2.1 vs. uniprot
Match: A0A1X2IC83_9FUNG (RNA helicase-domain-containing protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IC83_9FUNG)

HSP 1 Score: 241 bits (614), Expect = 3.450e-76
Identity = 118/186 (63.44%), Postives = 138/186 (74.19%), Query Frame = 0
Query:    1 LPEWACKFCGIHDPACVVKCVDTGKWFCNSCGSASGSHIVSHLV-------CTHPDSPLGETVLECYNCGSRNVFLMGFVPATADAVVVLLCRVCVEGVPALKDMGWDLNEWLPLIQDRRFLPWLVKVPTEQQQLRARQISAAQIARLEERWKADPGAALEDLDRPGGGADGAGGEAPQPVLLKYE 179
            LP  ACK+CGIH PA VVKCV   +WFCNS G+ SGSHI++HLV         HP+SPLGETVLECYNCG RNVFL+GF+PA +D VVVLLCR     VP+ KDM WD ++W+PLI DR FL WLVK+P EQ+QLRARQIS+AQI +LEE WK D  A LEDL++PG   D    E P PVLL+YE
Sbjct:  115 LPAHACKYCGIHSPASVVKCVTCDRWFCNSRGNTSGSHIINHLVRAKHKEVMLHPESPLGETVLECYNCGCRNVFLLGFIPAKSDTVVVLLCRQPCAAVPSSKDMNWDTSQWMPLIDDRCFLTWLVKIPPEQEQLRARQISSAQINKLEELWKDDTNATLEDLEKPG--VD----EEPHPVLLRYE 294          
BLAST of mRNA_P-wetherbeei_contig10381.2.1 vs. uniprot
Match: A0A6A4YUA5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YUA5_9STRA)

HSP 1 Score: 236 bits (603), Expect = 2.230e-74
Identity = 112/167 (67.07%), Postives = 129/167 (77.25%), Query Frame = 0
Query:    1 LPEWACKFCGIHDPACVVKCVDTGKWFCNSCGSASGSHIVSHLVCT-------HPDSPLGETVLECYNCGSRNVFLMGFVPATADAVVVLLCRVCVEGVPALKDMGWDLNEWLPLIQDRRFLPWLVKVPTEQQQLRARQISAAQIARLEERWKADPGAALEDLDRPG 160
            LP  AC +CG+HDPA VVKCV T KWFCNS G+ SGSHIV HLV +       HPDSPLGET+LECYNCG RN FL+GF+PA  D+VVVLLCR     + ALKDM WD+ +WLPLI DR FLPWLVKVPTE +QLR RQI+++QIA+LEE W+  P A LEDLDRPG
Sbjct:   82 LPSHACAYCGLHDPASVVKCVSTDKWFCNSRGNTSGSHIVQHLVRSKNKEVSLHPDSPLGETILECYNCGCRNAFLLGFIPAKQDSVVVLLCRDPCLQMNALKDMSWDMTQWLPLIDDRSFLPWLVKVPTEHEQLRTRQITSSQIAKLEEVWRDHPQATLEDLDRPG 248          
BLAST of mRNA_P-wetherbeei_contig10381.2.1 vs. uniprot
Match: A0A4D9CSA4_9STRA (UPF1_Zn_bind domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSA4_9STRA)

HSP 1 Score: 236 bits (602), Expect = 5.260e-74
Identity = 113/185 (61.08%), Postives = 140/185 (75.68%), Query Frame = 0
Query:    2 PEWACKFCGIHDPACVVKCVDTGKWFCNSCGSASGSHIVSHLV-------CTHPDSPLGETVLECYNCGSRNVFLMGFVPATADAVVVLLCRVCVEGVPALKDMGWDLNEWLPLIQDRRFLPWLVKVPTEQQQLRARQISAAQIARLEERWKADPGAALEDLDRPGGGADGAGGEAPQPVLLKYE 179
            PE+AC++CGIHDPACVV+CV++ KWFCNS  + +GSHI+ HLV         HP SPLG+TVLECYNCG RNVFL+GF+PA +D+VVVLLCR       ALKD+ WDL +W+PLI+DR FLPWLV+VP+EQ+QLRARQI+A QI +LEE WK +  A LE+++R GG     G E    VLLKYE
Sbjct:  153 PEYACRYCGIHDPACVVRCVESNKWFCNSRWNTTGSHIIQHLVKARNKTVALHPQSPLGDTVLECYNCGCRNVFLLGFIPAKSDSVVVLLCREPCLSNGALKDLDWDLAQWMPLIEDRAFLPWLVRVPSEQEQLRARQITAGQIQKLEEAWKENAEATLEEVERQGG----EGEEEGVAVLLKYE 333          
BLAST of mRNA_P-wetherbeei_contig10381.2.1 vs. uniprot
Match: A0A7J8BVY9_ROUAE (UPF1 RNA helicase and ATPase n=1 Tax=Rousettus aegyptiacus TaxID=9407 RepID=A0A7J8BVY9_ROUAE)

HSP 1 Score: 232 bits (592), Expect = 6.070e-73
Identity = 116/186 (62.37%), Postives = 136/186 (73.12%), Query Frame = 0
Query:    1 LPEWACKFCGIHDPACVVKCVDTGKWFCNSCGSASGSHIVSHLV-------CTHPDSPLGETVLECYNCGSRNVFLMGFVPATADAVVVLLCRVCVEGVPALKDMGWDLNEWLPLIQDRRFLPWLVKVPTEQQQLRARQISAAQIARLEERWKADPGAALEDLDRPGGGADGAGGEAPQPVLLKYE 179
            LP  AC +CGIHDPACVV C  + KWFCN  G+ SGSHIV+HLV         H D PLGETVLECYNCG RNVFL+GF+PA AD+VVVLLCR       +LKD+ WD ++W PLIQDR FL WLVK+P+EQ+QLRARQI+A QI +LEE WK +P A LEDL++PG   D    E PQ VLL+YE
Sbjct:  119 LPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPG--VD----EEPQHVLLRYE 298          
BLAST of mRNA_P-wetherbeei_contig10381.2.1 vs. uniprot
Match: A0A1S4DEP4_TOBAC (regulator of nonsense transcripts 1 homolog n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4DEP4_TOBAC)

HSP 1 Score: 231 bits (590), Expect = 1.110e-72
Identity = 117/186 (62.90%), Postives = 138/186 (74.19%), Query Frame = 0
Query:    3 EWACKFCGIHDPACVVKC--VDTGKWFCNSCGSASGSHIVSHLV-------CTHPDSPLGETVLECYNCGSRNVFLMGFVPATADAVVVLLCRVCVEGVPALKDMGWDLNEWLPLIQDRRFLPWLVKVPTEQQQLRARQISAAQIARLEERWKADPGAALEDLDRPGGGADGAGGEAPQPVLLKYE 179
            E ACK+CG+ +PACVV+C      KWFCNS G+ SGSHIV+HLV       C H DSPLGET+LECYNCG RNVFL+GF+ A A++VVVLLCR     V ALKDM WDL++W PLI DR FL WLVKVP+EQ+QLRARQISA QI ++EE WK +P A LEDL++PG   D    + PQPV LKYE
Sbjct:  139 EHACKYCGVTNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAESVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLQWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDATLEDLEKPG--VD----DEPQPVALKYE 318          
BLAST of mRNA_P-wetherbeei_contig10381.2.1 vs. uniprot
Match: G4YMU3_PHYSP (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora TaxID=4783 RepID=G4YMU3_PHYSP)

HSP 1 Score: 232 bits (591), Expect = 1.400e-72
Identity = 108/167 (64.67%), Postives = 133/167 (79.64%), Query Frame = 0
Query:    1 LPEWACKFCGIHDPACVVKCVDTGKWFCNSCGSASGSHIVSHLVCT-------HPDSPLGETVLECYNCGSRNVFLMGFVPATADAVVVLLCRVCVEGVPALKDMGWDLNEWLPLIQDRRFLPWLVKVPTEQQQLRARQISAAQIARLEERWKADPGAALEDLDRPG 160
            LP  AC +CG+HDPA VVKCV + KWFCNS G+ SGSHI+ HLV +       HP+SPLGETVLECYNCG RN FL+GF+PA  D+VVVLLCR     + ALKDM WD+++WLP+I+DR FLPWLVKVP+E +QLRARQI+++QIA+LEE W+ +P A +EDLDRPG
Sbjct:  124 LPPHACAYCGLHDPASVVKCVASDKWFCNSRGNTSGSHIIQHLVRSKNKEVSLHPESPLGETVLECYNCGCRNAFLLGFIPAKQDSVVVLLCRDPCLQMNALKDMSWDMSQWLPIIEDRSFLPWLVKVPSEHEQLRARQITSSQIAKLEELWRDNPLATVEDLDRPG 290          
BLAST of mRNA_P-wetherbeei_contig10381.2.1 vs. uniprot
Match: A0A8A5YP91_HUMAN (Regulator of nonsense transcripts 1 variant n=4 Tax=Homo sapiens TaxID=9606 RepID=A0A8A5YP91_HUMAN)

HSP 1 Score: 232 bits (591), Expect = 1.610e-72
Identity = 116/186 (62.37%), Postives = 136/186 (73.12%), Query Frame = 0
Query:    1 LPEWACKFCGIHDPACVVKCVDTGKWFCNSCGSASGSHIVSHLV-------CTHPDSPLGETVLECYNCGSRNVFLMGFVPATADAVVVLLCRVCVEGVPALKDMGWDLNEWLPLIQDRRFLPWLVKVPTEQQQLRARQISAAQIARLEERWKADPGAALEDLDRPGGGADGAGGEAPQPVLLKYE 179
            LP  AC +CGIHDPACVV C  + KWFCN  G+ SGSHIV+HLV         H D PLGETVLECYNCG RNVFL+GF+PA AD+VVVLLCR       +LKD+ WD ++W PLIQDR FL WLVK+P+EQ+QLRARQI+A QI +LEE WK +P A LEDL++PG   D    E PQ VLL+YE
Sbjct:  118 LPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPG--VD----EEPQHVLLRYE 297          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10381.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2RDC6_9STRA1.540e-8872.04Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
D7FN00_ECTSI1.870e-8673.51RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5L258_9PHAE3.200e-8471.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1X2IC83_9FUNG3.450e-7663.44RNA helicase-domain-containing protein n=1 Tax=Abs... [more]
A0A6A4YUA5_9STRA2.230e-7467.07Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A4D9CSA4_9STRA5.260e-7461.08UPF1_Zn_bind domain-containing protein n=1 Tax=Nan... [more]
A0A7J8BVY9_ROUAE6.070e-7362.37UPF1 RNA helicase and ATPase n=1 Tax=Rousettus aeg... [more]
A0A1S4DEP4_TOBAC1.110e-7262.90regulator of nonsense transcripts 1 homolog n=1 Ta... [more]
G4YMU3_PHYSP1.400e-7264.67Uncharacterized protein (Fragment) n=2 Tax=Phytoph... [more]
A0A8A5YP91_HUMAN1.610e-7262.37Regulator of nonsense transcripts 1 variant n=4 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018999RNA helicase UPF1, Cys/His rich zinc-binding domainPFAMPF09416UPF1_Zn_bindcoord: 5..147
e-value: 7.3E-62
score: 207.8
IPR018999RNA helicase UPF1, Cys/His rich zinc-binding domainCDDcd21400ZBD_UPF1-likecoord: 5..118
e-value: 3.88595E-56
score: 170.888
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..179
NoneNo IPR availablePANTHERPTHR10887:SF486REGULATOR OF NONSENSE TRANSCRIPTS 1-LIKE PROTEINcoord: 48..179
IPR045055DNA2/NAM7-like helicasePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 48..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10381contigP-wetherbeei_contig10381:705..2359 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10381.2.1mRNA_P-wetherbeei_contig10381.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10381 705..2359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10381.2.1 ID=prot_P-wetherbeei_contig10381.2.1|Name=mRNA_P-wetherbeei_contig10381.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp
LPEWACKFCGIHDPACVVKCVDTGKWFCNSCGSASGSHIVSHLVCTHPDS
PLGETVLECYNCGSRNVFLMGFVPATADAVVVLLCRVCVEGVPALKDMGW
DLNEWLPLIQDRRFLPWLVKVPTEQQQLRARQISAAQIARLEERWKADPG
AALEDLDRPGGGADGAGGEAPQPVLLKYE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018999UPF1_CH/ZBD
IPR045055DNA2/NAM7-like