prot_P-wetherbeei_contig10353.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10353.1.1
Unique Nameprot_P-wetherbeei_contig10353.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length327
Homology
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BLAST of mRNA_P-wetherbeei_contig10353.1.1 vs. uniprot
Match: A0A835ZB85_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB85_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 5.210e-5
Identity = 34/88 (38.64%), Postives = 42/88 (47.73%), Query Frame = 0 
Query:    1 WGLLGAGFLASPAAYMEAYGAARAGDCCGILYGCGGSQLAAQVTWCLATTMLAMAAVVVPGVLLRAAKQLRVSQAAEVEGTDVMLHGG 88
            WG+   G LA P  Y   Y   R+G CCG  YGCGGSQL AQ+ + L           +   + +    LRVS+  E  G D   HGG
Sbjct:  372 WGMFAVGLLAEPNNYGRVYYEDRSGICCGAFYGCGGSQLGAQIVFILVNLAWTGVTSALMFTVAKYTVGLRVSKEIEELGMDTSKHGG 459
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10353.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZB85_9STRA5.210e-538.64Ammonium transporter n=1 Tax=Tribonema minus TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029020Ammonium/urea transporterGENE3D1.10.3430.10Ammonium transporter AmtB like domainscoord: 1..96
e-value: 8.7E-9
score: 36.8
IPR024041Ammonium transporter AmtB-like domainPFAMPF00909Ammonium_transpcoord: 1..89
e-value: 2.5E-6
score: 26.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10353contigP-wetherbeei_contig10353:97..1941 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10353.1.1mRNA_P-wetherbeei_contig10353.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10353 97..1941 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10353.1.1 ID=prot_P-wetherbeei_contig10353.1.1|Name=mRNA_P-wetherbeei_contig10353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=327bp
WGLLGAGFLASPAAYMEAYGAARAGDCCGILYGCGGSQLAAQVTWCLATT
MLAMAAVVVPGVLLRAAKQLRVSQAAEVEGTDVMLHGGAEVGEHATTLLQ
LLTSDASFHTATDGIFSDRKMDEAAASSNFERSSTHQMTRTLSSKESDSV
SMNKPDGNSVNGASRSARSGEATKRLAKALRDGKAKQSGSGRAILNVAGG
MSPPVSPLASPAGSPTGRGASFKITLPQDASLLHDSSAEQSVSRGAERSV
SMRDMHTGDRSTVDDPNSEAHTGPVAVHRLSSITPPSLATSATAAAVAAF
TSGTSSAKGGARPSSRAGGDAATANAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029020Ammonium/urea_transptr
IPR024041NH4_transpt_AmtB-like_dom