prot_P-wetherbeei_contig1034.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1034.4.1
Unique Nameprot_P-wetherbeei_contig1034.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length476
Homology
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BLAST of mRNA_P-wetherbeei_contig1034.4.1 vs. uniprot
Match: A0A7S2CE03_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CE03_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 5.230e-5
Identity = 30/82 (36.59%), Postives = 43/82 (52.44%), Query Frame = 0 
Query:   76 FYEGSADLPFGTTLRVREQPHTDADTMGTVAAHSLIYAVERRGHWIRVCCSDADVSDDSG--GQRLDGWMLTATADRTLLVP 155
            +Y     +P G  L+VRE+P+ DA  +G + AH  I      G W  V  +D +  + +    +  +GWMLT TA R LLVP
Sbjct:  157 WYRVEDTMPKGAVLKVRERPNADAPVIGGLPAHHAIEVTVSSGDWCMVIYTDPETREHNPHKAEVKEGWMLTRTARRLLLVP 238
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1034.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S2CE03_9STRA5.230e-536.59Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003646SH3-like domain, bacterial-typeSMARTSM00287sh3_bac_9coord: 350..413
e-value: 4.6E-4
score: 29.5
NoneNo IPR availableGENE3D2.30.30.40SH3 Domainscoord: 357..424
e-value: 1.5E-5
score: 27.0
coord: 255..308
e-value: 8.1E-6
score: 27.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1034contigP-wetherbeei_contig1034:4279..6041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1034.4.1mRNA_P-wetherbeei_contig1034.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1034 3800..8091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1034.4.1 ID=prot_P-wetherbeei_contig1034.4.1|Name=mRNA_P-wetherbeei_contig1034.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=476bp
MIYSLGVVLLEEFDAVPLFPSAPNQGPPPPIDGELRRGIKTRAVGKLGDW
CRIEAEPNVSGWVDASCIAPHALPAFYEGSADLPFGTTLRVREQPHTDAD
TMGTVAAHSLIYAVERRGHWIRVCCSDADVSDDSGGQRLDGWMLTATADR
TLLVPCIPWLAAFGEDLPERAVLNVRAAPVDDAAVVDQLTVEHSRLLPAL
EATNADAAADGGGWMRICHPHHPFAWLKMHASGYTLVAPVVARPHRINPE
LLSGGVTATLNVRSAPAAGASAVGAVGLDDVVDVVDGRNGWHRVLFRACE
EAWVLAASGGVPLLVPCDEKHGGGPVFGDGGGSGGTGAGGTHAGGAGARV
DGVYSRAMGPLKLREEPDTSSIEAGTVAAGDAVRVLQSDGAWRLVAYGGR
EDFWVLSRNSRGPIGTEAYVSRQLNLRLCDGEAGKLLDRLVLLDDIQGAF
ALLRLSGAPRPIYNARAVPPSAAVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003646SH3-like_bac-type