prot_P-wetherbeei_contig10320.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10320.1.1
Unique Nameprot_P-wetherbeei_contig10320.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length216
Homology
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: A0A6H5L1H9_9PHAE (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H9_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 8.770e-35
Identity = 82/200 (41.00%), Postives = 122/200 (61.00%), Query Frame = 0
Query:   24 GRESRGDAEDCPICLG-PCLLQVGTNCNHQFCAKCFLEYANSVRGLKIKCPCCRSEVNLLHQRKADA-TSGETE----ASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVLYIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYRVAL 216
            GR +R    +CPICL       V TNC H FCA+C L Y +    ++I+CP CR EV +LH    DA  +G+T+    A      A + G+  ++ +I+ FN R +G  RS  Q + DAP+LLR L SD+ RGD R+F  ++RR +     LQ  +  LYI+SP+D +PE++VGI G LDD++V +F L++++++YR  L
Sbjct:   54 GRLARHPGGECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVRIRCPMCRQEVTMLHGAAGDAQAAGDTDQAHDARAESAPAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQ----LQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVL 249          
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: A0A0P5FYD2_9CRUS (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5FYD2_9CRUS)

HSP 1 Score: 110 bits (274), Expect = 8.440e-26
Identity = 74/192 (38.54%), Postives = 105/192 (54.69%), Query Frame = 0
Query:   25 RESRGDAEDCPICLGPCLLQVGTNCNHQFCAKCFLEYA--NSVRGLKIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVLYIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 213
            R   G    CP+CL     +V TNC H FC KC+L Y    S  G  ++CP CR +V +L Q   +     T  S  E      GT    R+I  +N RY+G  R   +TVR+ PIL R+L+S+I    G ++   LR   VS  ++ C   V+Y++SP+D +PEA  GILG +DD+LV L   V+++ +YR
Sbjct:   63 RRRYGSQNQCPVCLNDIAYEVETNCGHIFCCKCWLAYRAHGSFLGA-VRCPVCRQQVTILFQCFTENELNPTSGSEEEPEL---GT--FIREINSYNRRYSGEPRQFWETVRELPILFRHLVSEIFSEGGFLYLYRLR---VSLLVIGC---VIYLLSPLDIIPEAAFGILGLVDDMLVLLVVSVFLTNVYR 242          
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: E9H0E3_DAPPU (E3 ubiquitin-protein ligase RNF170 (Fragment) n=4 Tax=Daphnia TaxID=6668 RepID=E9H0E3_DAPPU)

HSP 1 Score: 107 bits (267), Expect = 4.190e-25
Identity = 68/192 (35.42%), Postives = 104/192 (54.17%), Query Frame = 0
Query:   25 RESRGDAEDCPICLGPCLLQVGTNCNHQFCAKCFLEYA--NSVRGLKIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVLYIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 213
            R   G    CP+CL     +V TNC H FC +C+L Y    S  G  ++CP CR +V +L Q  +     E E + A G           R+I  +N RY+G  R   + +R+ P+L R++LS++    G ++   LR   VS  ++ C   V+Y++SP+D +PEA  G+LG +DD+LV L   V+I+ +YR
Sbjct:   24 RRRYGQQNQCPVCLNDIEYEVETNCGHIFCCRCWLAYRAHGSFLGA-VRCPVCRQQVTILFQGFS-----ENELNPASGSDEEPDLATFIREINSYNRRYSGEPRPFWENIRELPVLFRHILSEVFSEGGFLYLYRLR---VSLLVIGC---VIYLLSPLDIIPEAAFGLLGLVDDLLVLLVVAVFITNVYR 203          
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: UPI001939D670 (E3 ubiquitin-protein ligase RNF170-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939D670)

HSP 1 Score: 107 bits (268), Expect = 5.770e-25
Identity = 70/182 (38.46%), Postives = 97/182 (53.30%), Query Frame = 0
Query:   34 CPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVLYIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 213
            CPICL    L V TNC H FCA C + Y      L  + CP CR +V+LL  R   A    +EA           TR    +I  +N R++G  R +   +RD P L+R+L S+     G +F   +R  L +  +L      LY++SP+DFLPEAV GI+G LDDV V +  L+Y++ +YR
Sbjct:   92 CPICLQEARLPVETNCGHLFCAHCIITYWRFGNWLGAVNCPVCRQQVSLL-LRNFQAGENHSEA-----------TRDALTNINDYNRRFSGQPRPILDYIRDIPALMRHLWSEFFSMGGLVFMFRVRIVLCAIAIL------LYLISPLDFLPEAVFGIIGLLDDVFVLMLVLIYMTVIYR 255          
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: A0A5A9P4R7_9TELE (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9P4R7_9TELE)

HSP 1 Score: 107 bits (267), Expect = 1.060e-24
Identity = 73/183 (39.89%), Postives = 99/183 (54.10%), Query Frame = 0
Query:   34 CPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVL-YIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 213
            CP+CL   +L V TNC H FC  C + Y      L  I CP CR  V LL     D TSG   A T +G+  +     +  DI  +N R++G  RSL   +RD P LLR+   ++    G  +   +R       +L CL+G L Y+VSP+DF+PE VVG+LG++DD  V L   +YIS +YR
Sbjct:   88 CPVCLQQAVLPVETNCGHLFCGPCIVAYWRYGTWLGAINCPICRQMVTLLFPLFHD-TSGS--ARTQDGQVEA---AQIVNDIDDYNRRFSGQPRSLVDRLRDVPTLLRHAFREMFSVGGLFWMFRIR-------ILLCLVGALTYLVSPLDFIPEGVVGLLGFMDDFFVILLLFIYISIMYR 257          
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: A0A671M8Z7_9TELE (E3 ubiquitin-protein ligase RNF170 n=7 Tax=Sinocyclocheilus TaxID=75365 RepID=A0A671M8Z7_9TELE)

HSP 1 Score: 106 bits (265), Expect = 1.230e-24
Identity = 68/183 (37.16%), Postives = 94/183 (51.37%), Query Frame = 0
Query:   34 CPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVL-YIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 213
            CP+CL   LL V TNC H FC  C + Y      L  I CP CR  V LL     D    + E +             + RDI  +N R++G  RSL + +RD P LLR+   ++    G  +   +R       +L C+LG L Y+ SP+DF+PE V+G+LG++DD  V L   +YIS +YR
Sbjct:   77 CPVCLQQALLPVETNCGHLFCGPCIVAYWRYGTWLGSISCPICRQTVTLLFPLFRDTGGAQVEPAL------------ILRDIHDYNRRFSGQPRSLLERLRDVPTLLRHAFREMFSVGGLFWMFRVR-------ILLCVLGALMYLASPLDFIPEGVLGLLGFMDDFFVILLLFIYISIMYR 240          
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: K1QDR4_CRAGI (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1QDR4_CRAGI)

HSP 1 Score: 106 bits (264), Expect = 1.850e-24
Identity = 68/183 (37.16%), Postives = 92/183 (50.27%), Query Frame = 0
Query:   33 DCPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVLYIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 213
            DCP+CLG     + TNC H FC  C + Y      L  ++CP CR +V LL     D    +  AS  E          +   IA +N R++G  R L   +RD P LLR+ L +     G I+   LR   +       L  +LY +SP+D +PEAV GILG+LDD+ V L   +YIS +YR
Sbjct:   75 DCPVCLGNTQYGIETNCGHIFCGTCIITYWEHGTWLGAVRCPVCRQQVTLLLVHFTDEEQNQPSASKTE----------ILNKIADYNRRFSGEPRPLMDYLRDLPTLLRHALREFFSVGGLIWMFRLRIIAIF------LAALLYFISPLDIIPEAVFGILGFLDDLFVLLLLAIYISIIYR 241          
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: W5M630_LEPOC (E3 ubiquitin-protein ligase RNF170 n=3 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5M630_LEPOC)

HSP 1 Score: 106 bits (264), Expect = 2.470e-24
Identity = 69/189 (36.51%), Postives = 95/189 (50.26%), Query Frame = 0
Query:   34 CPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLL------HQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVL-YIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 213
            CP+CL    L V TNC H FC  C + Y      L  I CP CR  V LL      H   A    G+ EA              + +D+  +N R++G  RSL   +RD P LLR+   ++    G  +   +R       +L CL+G L Y+ SP+DF+PEA+ GILG++DD+ V L   +YIS +YR
Sbjct:   88 CPVCLQQASLPVETNCGHLFCGSCIIAYWRYGSWLGAINCPICRQMVTLLFPLFHEHDLPAQTQEGQPEAGQ------------ILQDVYDYNRRFSGQPRSLMDRIRDVPTLLRHAFREMFSVGGLFWMFRIR-------ILLCLIGALTYLASPLDFIPEALFGILGFMDDLFVILLLFIYISIMYR 257          
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: H3AD78_LATCH (E3 ubiquitin-protein ligase RNF170 n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AD78_LATCH)

HSP 1 Score: 103 bits (258), Expect = 2.470e-24
Identity = 67/183 (36.61%), Postives = 94/183 (51.37%), Query Frame = 0
Query:   34 CPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLG-VLYIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 213
            CP+CL      V TNC H FC  C + Y      L  I CP CR  V LL     + +  + E   A         R + R++  +N R++G  RSL   + D P LLR+   ++    G  +   +R       +L CL+G +LY+ SP+DFLPEA+ GILG+LDD+ V    L+YIS +YR
Sbjct:    3 CPVCLQQATFPVETNCGHLFCGPCIIAYWTYGSWLGAISCPICRQTVTLLFPLFQEESQQQDEQQDA---------REILRNVNDYNRRFSGQPRSLMDRIMDLPTLLRHAFREMFSVGGLFWMFRIR-------ILLCLMGALLYLASPLDFLPEALFGILGFLDDLFVIFLLLIYISIMYR 169          
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: A0A673ZI15_SALTR (E3 ubiquitin-protein ligase RNF170 n=3 Tax=Salmoninae TaxID=504568 RepID=A0A673ZI15_SALTR)

HSP 1 Score: 105 bits (263), Expect = 2.590e-24
Identity = 69/186 (37.10%), Postives = 98/186 (52.69%), Query Frame = 0
Query:   34 CPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRA---VERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVL-YIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 213
            CP+CL   +L V TNC H FC  C + Y      L  I CP CR  V LL     +  S +            DGT     + RD++ +N R++G  RSL   +RD P LLR+L  ++    G  +   +R       +L CL+G L Y++SP+DF+PEA+ G+LG+LDD  + L   +YIS +YR
Sbjct:   74 CPVCLQQAVLPVETNCGHLFCGSCIIAYWRYGTWLGAISCPICRQMVTLLFPLFHEQVSPQQ---------VQDGTVEPLFILRDLSDYNRRFSGQPRSLMDRLRDVPTLLRHLFREMFSVGGLFWMFRIR-------VLLCLIGALTYLISPLDFIPEALFGLLGFLDDFFIILLLFIYISIMYR 243          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1H9_9PHAE8.770e-3541.00E3 ubiquitin-protein ligase RNF170 n=1 Tax=Ectocar... [more]
A0A0P5FYD2_9CRUS8.440e-2638.54E3 ubiquitin-protein ligase RNF170 n=1 Tax=Daphnia... [more]
E9H0E3_DAPPU4.190e-2535.42E3 ubiquitin-protein ligase RNF170 (Fragment) n=4 ... [more]
UPI001939D6705.770e-2538.46E3 ubiquitin-protein ligase RNF170-like n=1 Tax=St... [more]
A0A5A9P4R7_9TELE1.060e-2439.89E3 ubiquitin-protein ligase RNF170 n=1 Tax=Triplop... [more]
A0A671M8Z7_9TELE1.230e-2437.16E3 ubiquitin-protein ligase RNF170 n=7 Tax=Sinocyc... [more]
K1QDR4_CRAGI1.850e-2437.16E3 ubiquitin-protein ligase RNF170 n=1 Tax=Crassos... [more]
W5M630_LEPOC2.470e-2436.51E3 ubiquitin-protein ligase RNF170 n=3 Tax=Lepisos... [more]
H3AD78_LATCH2.470e-2436.61E3 ubiquitin-protein ligase RNF170 n=2 Tax=Latimer... [more]
A0A673ZI15_SALTR2.590e-2437.10E3 ubiquitin-protein ligase RNF170 n=3 Tax=Salmoni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 4..114
e-value: 5.5E-12
score: 47.5
IPR010652Domain of unknown function DUF1232PFAMPF06803DUF1232coord: 170..203
e-value: 1.4E-8
score: 34.4
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 34..75
e-value: 2.8E-4
score: 20.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR22894:SF5E3 UBIQUITIN-PROTEIN LIGASE RNF170-LIKE PROTEIN (DUF 1232)coord: 6..214
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 33..82
IPR038896E3 ubiquitin-protein ligase RNF170PANTHERPTHR22894UNCHARACTERIZEDcoord: 6..214
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 34..76
score: 11.102496

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10320contigP-wetherbeei_contig10320:362..1488 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10320.1.1mRNA_P-wetherbeei_contig10320.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10320 362..1488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10320.1.1 ID=prot_P-wetherbeei_contig10320.1.1|Name=mRNA_P-wetherbeei_contig10320.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp
QNRRAASSYHRSRSQEEEEQLGRGRESRGDAEDCPICLGPCLLQVGTNCN
HQFCAKCFLEYANSVRGLKIKCPCCRSEVNLLHQRKADATSGETEASTAE
GRATSDGTRAVERDIAHFNTRYAGARSLGQTVRDAPILLRYLLSDIVRGD
GRIFAIMLRRTLVSYQLLQCLLGVLYIVSPVDFLPEAVVGILGYLDDVLV
FLFALVYISTLYRVAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR010652DUF1232
IPR018957Znf_C3HC4_RING-type
IPR038896RNF170
IPR001841Znf_RING