prot_P-wetherbeei_contig1031.5.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1031.5.1
Unique Nameprot_P-wetherbeei_contig1031.5.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length365
Homology
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BLAST of mRNA_P-wetherbeei_contig1031.5.1 vs. uniprot
Match: A0A7S4DB10_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB10_HETAK)

HSP 1 Score: 211 bits (536), Expect = 4.740e-57
Identity = 98/279 (35.13%), Postives = 139/279 (49.82%), Query Frame = 0 
Query:    1 LRSEFAEHQRTACAYRTVKCPLGCGTEMEEVVASAHAMMQCELRSWTCACGAVMRHRDRERHETADCLERVVACALCGEGVMVADRPEHDADLCPMRPWGCDCGAKVPLQNRAFHERHECQDRVLPCLNGCGFAGRRAARARHDEEPCSLTPSVCACGDLVLQRDLEQHRAAACEMRPVPCSACGARVPLAESCAHAXXXXXXXXXXXPRGCGKALLAVDLAQHLAGPCPRRPVLCGGCGREVPVGLLDTHHKSMCQVVPCSFCQRLVLAEDLDGHANE 279
            L+  +  H+ T C YR VKC   CG EME +    H  ++CELR+W C CG  +  + + +            C+ CGE +   DR EH+ DLC MRPW C CG  VP+++++ HE +EC D  L CLNGCG  GR A R  H+E  C L   +C CGD    +DL+ H+   CE R V C  C     + +   H             +GCG+A++A                    CG+E+P   L+ H +S+C+V+PC  C R++L  +   H  E
Sbjct: 1666 LKDAYRAHRETDCPYRLVKCRFNCGKEMEAMQLKIHESVECELRTWECLCGDRLPFKHKTKXXXXXXXXXXXKCSACGEEMTEGDRKEHETDLCVMRPWICGCGITVPIKDKSHHEMYECSDPSLACLNGCGMLGREAVRKAHEENECPLRLIICDCGDAFQAKDLQIHKDNYCEERAVACPLCNEPTKIRDLEKHTASECLHRVVPCKQGCGRAVVAGQXXXXXXXXXXXXXXXXKLCGKEMPHRALEAHERSLCRVLPCPQCGRVLLRGEHARHLEE 1944
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BLAST of mRNA_P-wetherbeei_contig1031.5.1 vs. uniprot
Match: A0A1W0AAT4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAT4_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.870e-10
Identity = 48/137 (35.04%), Postives = 60/137 (43.80%), Query Frame = 0 
Query:    8 HQRTACAYRTVKCPLGCGTEMEEVVASAHAMMQCELRSWTC-ACGAVMRHRDRERHETADCLERVVACAL---CGEGVMVADRPEHDADLCPMRPWGCD-----CGAKV-PLQNRAFHERHECQDRVLPCLNGCGFA 134
            HQ   C YR V C L C   +       H   +C LRS TC AC   M  ++ ++H    C +R+V C L   CGE     D   H   LC  R   C      C A + P + R  HE   C  RV+ C NGCG +
Sbjct:  459 HQVEHCHYRLVYCRLECSKSLRWHQRPDHEANECPLRSITCTACNHGMLSQELKKHSRQACSKRLVECKLYGGCGEIHRYEDMNFHTESLCVRRKRPCHWASNGCDAIIGPPEVRHLHEETTCPYRVVACRNGCGMS 595
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1031.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S4DB10_HETAK4.740e-5735.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1W0AAT4_9STRA2.870e-1035.04Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 95..146
e-value: 2.3E-5
score: 26.3
coord: 258..306
e-value: 7.3E-9
score: 37.5
coord: 307..364
e-value: 1.2E-8
score: 36.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 199..257
e-value: 7.4E-11
score: 44.2
coord: 36..94
e-value: 6.1E-6
score: 28.5
coord: 147..198
e-value: 1.5E-6
score: 30.4
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 198..251
e-value: 1.2E-6
score: 29.1
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 276..322
score: 9.332314
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 195..244
score: 10.970743
IPR043211TNF receptor-associated factor TRAFPANTHERPTHR10131TNF RECEPTOR ASSOCIATED FACTORcoord: 5..76
IPR043211TNF receptor-associated factor TRAFPANTHERPTHR10131TNF RECEPTOR ASSOCIATED FACTORcoord: 268..357
coord: 58..132
coord: 195..265
NoneNo IPR availablePANTHERPTHR10131:SF65RING FINGER PROTEIN DG17-RELATEDcoord: 5..76
NoneNo IPR availablePANTHERPTHR10131:SF65RING FINGER PROTEIN DG17-RELATEDcoord: 58..132
coord: 195..265
NoneNo IPR availablePANTHERPTHR10131:SF65RING FINGER PROTEIN DG17-RELATEDcoord: 268..357
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 259..345
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 94..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1031contigP-wetherbeei_contig1031:5420..6514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1031.5.1mRNA_P-wetherbeei_contig1031.5.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1031 5420..6514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1031.5.1 ID=prot_P-wetherbeei_contig1031.5.1|Name=mRNA_P-wetherbeei_contig1031.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=365bp
LRSEFAEHQRTACAYRTVKCPLGCGTEMEEVVASAHAMMQCELRSWTCAC
GAVMRHRDRERHETADCLERVVACALCGEGVMVADRPEHDADLCPMRPWG
CDCGAKVPLQNRAFHERHECQDRVLPCLNGCGFAGRRAARARHDEEPCSL
TPSVCACGDLVLQRDLEQHRAAACEMRPVPCSACGARVPLAESCAHATEA
CPARAAPCPRGCGKALLAVDLAQHLAGPCPRRPVLCGGCGREVPVGLLDT
HHKSMCQVVPCSFCQRLVLAEDLDGHANECSSRPAPCARCSETVPLATMQ
AHLDGPCGARTVKCNACGQEVEAREAVQHTANACPERVVRCGRGCGQRMK
LSHRGTHEARSCLLN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001293Znf_TRAF
IPR043211TNF_rcpt-assoc_TRAF