prot_P-wetherbeei_contig10228.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10228.2.1
Unique Nameprot_P-wetherbeei_contig10228.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length127
Homology
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BLAST of mRNA_P-wetherbeei_contig10228.2.1 vs. uniprot
Match: D8LC61_ECTSI (Putative copper transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC61_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 2.320e-13
Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 0 
Query:    8 LVRCLDEIGFMSAFISSSTT-EMLGPGDDSSAVWAIAAALGLVDRGCAMAWGGECSCDPSNCRCVNCTIHVSEAASAVNEV 87
            L   LD IGF S+ ++++TT E     D  +AVWAIA ALGLVD GCAMAWG  CSC   +CRC+NC  H+ + + AV+ V
Sbjct:  733 LTSALDAIGFGSSCVATTTTQEPTLEQDGVNAVWAIANALGLVDPGCAMAWGRPCSCG-DDCRCINCPQHMKKVSHAVDLV 812
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10228.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC61_ECTSI2.320e-1351.85Putative copper transporter n=1 Tax=Ectocarpus sil... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10228contigP-wetherbeei_contig10228:813..1505 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10228.2.1mRNA_P-wetherbeei_contig10228.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10228 813..1935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10228.2.1 ID=prot_P-wetherbeei_contig10228.2.1|Name=mRNA_P-wetherbeei_contig10228.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=127bp
MEVRPQTLVRCLDEIGFMSAFISSSTTEMLGPGDDSSAVWAIAAALGLVD
RGCAMAWGGECSCDPSNCRCVNCTIHVSEAASAVNEVCSHLEEWDKDETG
SASGGGGSGGGGSGGGCGCAGDAAAQG
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