prot_P-wetherbeei_contig10215.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig10215.3.1
Unique Name	prot_P-wetherbeei_contig10215.3.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	113

Homology

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BLAST of mRNA_P-wetherbeei_contig10215.3.1 vs. uniprot
Match: A0A7X9KKT9_9ACTN (Ku protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KKT9_9ACTN)

HSP 1 Score: 196 bits (497), Expect = 1.110e-62
Identity = 95/113 (84.07%), Postives = 106/113 (93.81%), Query Frame = 0

Query:    1 MPRPVWSGTISFGLIAIPIKLFHAVSKKSVSFNQLDERTMSRIKLKKVSAEDGSDVPDESIVKGYEISKGRYILVDPDELEPFIPSATKTIELEEFVDLVEIDPVYFDSPYIV 113
            MPRP+WSGTISFGL+AIPIKL++ VSKKSVSFNQLD+R+MSRIKLKKVSA+ G DVPDE IVKGYEISKGRY++VDPDELEPF+PS TK+IELEEFVDL EIDPVYFDS YIV
Sbjct:    1 MPRPIWSGTISFGLVAIPIKLYNGVSKKSVSFNQLDDRSMSRIKLKKVSADTGDDVPDEHIVKGYEISKGRYVVVDPDELEPFMPSVTKSIELEEFVDLSEIDPVYFDSQYIV 113

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BLAST of mRNA_P-wetherbeei_contig10215.3.1 vs. uniprot
Match: A0A7K1B2F3_9ACTN (Non-homologous end joining protein Ku n=2 Tax=root TaxID=1 RepID=A0A7K1B2F3_9ACTN)

HSP 1 Score: 199 bits (507), Expect = 6.920e-62
Identity = 96/113 (84.96%), Postives = 108/113 (95.58%), Query Frame = 0

Query:    1 MPRPVWSGTISFGLIAIPIKLFHAVSKKSVSFNQLDERTMSRIKLKKVSAEDGSDVPDESIVKGYEISKGRYILVDPDELEPFIPSATKTIELEEFVDLVEIDPVYFDSPYIV 113
            MPRPVWSGTISFGL+AIPIKLFH VSKKSVSFNQLD+R+MSRI+LKKVSAE G DVP+E IVKGYE+SKGRY++VDPDELEPFIP+ATK+I+LEEFVDL EIDPVYFD+PYIV
Sbjct:    1 MPRPVWSGTISFGLVAIPIKLFHGVSKKSVSFNQLDDRSMSRIRLKKVSAETGEDVPEEHIVKGYELSKGRYVVVDPDELEPFIPAATKSIDLEEFVDLDEIDPVYFDTPYIV 113

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BLAST of mRNA_P-wetherbeei_contig10215.3.1 vs. uniprot
Match: A0A539DTX7_9ACTN (Non-homologous end joining protein Ku n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DTX7_9ACTN)

HSP 1 Score: 198 bits (504), Expect = 1.750e-61
Identity = 92/113 (81.42%), Postives = 108/113 (95.58%), Query Frame = 0

Query:    1 MPRPVWSGTISFGLIAIPIKLFHAVSKKSVSFNQLDERTMSRIKLKKVSAEDGSDVPDESIVKGYEISKGRYILVDPDELEPFIPSATKTIELEEFVDLVEIDPVYFDSPYIV 113
            MPRPVWSGTISFGL+AIPIKLFH VSKK++SFNQLDERT+SRI+LKKVSA+ G +VPDE IV+G+E+SKGRY++VDPDELEPFIPSATK+I+LEEFVDL EIDPVYFD+PYI+
Sbjct:    1 MPRPVWSGTISFGLVAIPIKLFHGVSKKNISFNQLDERTLSRIRLKKVSADSGDEVPDEHIVRGFEVSKGRYVVVDPDELEPFIPSATKSIDLEEFVDLAEIDPVYFDTPYII 113

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BLAST of mRNA_P-wetherbeei_contig10215.3.1 vs. uniprot
Match: A0A3C2AZQ9_9ACTN (Non-homologous end joining protein Ku n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2AZQ9_9ACTN)

HSP 1 Score: 193 bits (490), Expect = 1.620e-59
Identity = 90/112 (80.36%), Postives = 107/112 (95.54%), Query Frame = 0

Query:    1 MPRPVWSGTISFGLIAIPIKLFHAVSKKSVSFNQLDERTMSRIKLKKVSAEDGSDVPDESIVKGYEISKGRYILVDPDELEPFIPSATKTIELEEFVDLVEIDPVYFDSPYI 112
            MPRPVWSGT+SFGL+AIPIKL+HAVSKKS+SFNQLD+RTMSRIKL+KVSAE G +VPDE IVKGYE+SKGRY++VDP++LEPF+P+ATK+I+LEEFVDL +IDPVYFDS YI
Sbjct:    1 MPRPVWSGTVSFGLVAIPIKLYHAVSKKSISFNQLDDRTMSRIKLRKVSAETGEEVPDEHIVKGYEVSKGRYVVVDPEDLEPFMPAATKSIDLEEFVDLDQIDPVYFDSAYI 112

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BLAST of mRNA_P-wetherbeei_contig10215.3.1 vs. uniprot
Match: A0A7W1HJY9_9ACTN (Non-homologous end joining protein Ku n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1HJY9_9ACTN)

HSP 1 Score: 191 bits (484), Expect = 1.100e-58
Identity = 89/111 (80.18%), Postives = 104/111 (93.69%), Query Frame = 0

Query:    1 MPRPVWSGTISFGLIAIPIKLFHAVSKKSVSFNQLDERTMSRIKLKKVSAEDGSDVPDESIVKGYEISKGRYILVDPDELEPFIPSATKTIELEEFVDLVEIDPVYFDSPY 111
            MPRPVWSGTISFGL+AIP+KLF+AV++KSVSFNQLDERTMSRI+ +KVS E G +VPDE I+KGYE+SKGRY++VDPDELEPFIP+ATKT++LEEFVDL EIDPVYFDS Y
Sbjct:    1 MPRPVWSGTISFGLVAIPVKLFNAVNRKSVSFNQLDERTMSRIRYRKVSDETGDEVPDEHIIKGYEVSKGRYVVVDPDELEPFIPAATKTVDLEEFVDLAEIDPVYFDSAY 111

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BLAST of mRNA_P-wetherbeei_contig10215.3.1 vs. uniprot
Match: A0A848UF48_9ACTN (Non-homologous end joining protein Ku n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UF48_9ACTN)

HSP 1 Score: 189 bits (480), Expect = 9.300e-58
Identity = 90/113 (79.65%), Postives = 104/113 (92.04%), Query Frame = 0

Query:    1 MPRPVWSGTISFGLIAIPIKLFHAVSKKSVSFNQLDERTMSRIKLKKVSAEDGSDVPDESIVKGYEISKGRYILVDPDELEPFIPSATKTIELEEFVDLVEIDPVYFDSPYIV 113
            MPRPVW+GTISFGL+AIP+KLFHAV K+SVSFNQLD+RTM+RI+ KKVSA DG +VPDE IVKGYE+SK RYI+VDPDELEPFIPSATKT+ELEEFVDL EIDPV++D+ Y V
Sbjct:    1 MPRPVWTGTISFGLVAIPVKLFHAVRKQSVSFNQLDDRTMARIRYKKVSAADGEEVPDEHIVKGYEVSKDRYIIVDPDELEPFIPSATKTVELEEFVDLDEIDPVFYDNAYYV 113

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BLAST of mRNA_P-wetherbeei_contig10215.3.1 vs. uniprot
Match: A0A7W1LS24_9ACTN (Non-homologous end joining protein Ku n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1LS24_9ACTN)

HSP 1 Score: 187 bits (476), Expect = 1.060e-57
Identity = 89/113 (78.76%), Postives = 103/113 (91.15%), Query Frame = 0

Query:    1 MPRPVWSGTISFGLIAIPIKLFHAVSKKSVSFNQLDERTMSRIKLKKVSAEDGSDVPDESIVKGYEISKGRYILVDPDELEPFIPSATKTIELEEFVDLVEIDPVYFDSPYIV 113
            MPRPVW+GTISFGL+AIP+KLF+AV ++SVSFNQLDERTMSRI+ +KVS  DG +VPDE IVKGYE++KGRY+LVDPDELEPFIPSATKT+ELEEFVDL EIDPVYFD  + V
Sbjct:    1 MPRPVWTGTISFGLVAIPVKLFNAVRRQSVSFNQLDERTMSRIRYRKVSDADGEEVPDEHIVKGYEVAKGRYVLVDPDELEPFIPSATKTVELEEFVDLTEIDPVYFDGNFYV 113

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BLAST of mRNA_P-wetherbeei_contig10215.3.1 vs. uniprot
Match: A0A7W0KYG8_9ACTN (Non-homologous end joining protein Ku n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0KYG8_9ACTN)

HSP 1 Score: 188 bits (477), Expect = 1.130e-57
Identity = 87/113 (76.99%), Postives = 104/113 (92.04%), Query Frame = 0

Query:    1 MPRPVWSGTISFGLIAIPIKLFHAVSKKSVSFNQLDERTMSRIKLKKVSAEDGSDVPDESIVKGYEISKGRYILVDPDELEPFIPSATKTIELEEFVDLVEIDPVYFDSPYIV 113
            MPRPVW+GTISFGL+AIP+KLFHAVS+K VSFNQLDERTMSRI+ +KVS E G +VP++ IVKGYE+SKGRY++VDPDELEPF+PSATK+++LEEFVDL +IDPVYFDS Y V
Sbjct:    1 MPRPVWTGTISFGLVAIPVKLFHAVSRKGVSFNQLDERTMSRIRYRKVSDETGEEVPEQHIVKGYEVSKGRYVIVDPDELEPFMPSATKSVDLEEFVDLADIDPVYFDSSYYV 113

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BLAST of mRNA_P-wetherbeei_contig10215.3.1 vs. uniprot
Match: A0A7W1Z9V7_9ACTN (Non-homologous end joining protein Ku n=3 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1Z9V7_9ACTN)

HSP 1 Score: 185 bits (469), Expect = 1.220e-56
Identity = 86/111 (77.48%), Postives = 102/111 (91.89%), Query Frame = 0

Query:    1 MPRPVWSGTISFGLIAIPIKLFHAVSKKSVSFNQLDERTMSRIKLKKVSAEDGSDVPDESIVKGYEISKGRYILVDPDELEPFIPSATKTIELEEFVDLVEIDPVYFDSPY 111
            MPRPVW+GTISFGL+AIP+KLF+AV +KSVSFNQLDERTMSRI+ +KVS EDG +VPDE IVKGYE+SKGRY++VDP+ELEP +PSATKT+ELEEFVDL EIDP+Y+D  Y
Sbjct:    1 MPRPVWTGTISFGLVAIPVKLFNAVKRKSVSFNQLDERTMSRIRYRKVSDEDGEEVPDEHIVKGYEVSKGRYVVVDPEELEPLMPSATKTVELEEFVDLSEIDPMYYDGTY 111

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BLAST of mRNA_P-wetherbeei_contig10215.3.1 vs. uniprot
Match: A0A4R7HYD3_9ACTN (Non-homologous end joining protein Ku n=2 Tax=Acidimicrobiales TaxID=84993 RepID=A0A4R7HYD3_9ACTN)

HSP 1 Score: 184 bits (466), Expect = 4.490e-56
Identity = 88/113 (77.88%), Postives = 102/113 (90.27%), Query Frame = 0

Query:    1 MPRPVWSGTISFGLIAIPIKLFHAVSKKSVSFNQLDERTMSRIKLKKVSAEDGSDVPDESIVKGYEISKGRYILVDPDELEPFIPSATKTIELEEFVDLVEIDPVYFDSPYIV 113
            M RPVW+GTISFGL+AIPIKLFHAV +K++SFNQLD+R+MSRI+ +KVSA DG  VPDE IVKGYE+SK RY++VDPDELEPF+PSATKTI+LEEFVDL EIDPVYFDS Y V
Sbjct:    1 MARPVWNGTISFGLVAIPIKLFHAVRRKNISFNQLDDRSMSRIRYQKVSASDGEVVPDEHIVKGYEVSKDRYVVVDPDELEPFLPSATKTIDLEEFVDLEEIDPVYFDSAYYV 113

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig10215.3.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig10215.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7X9KKT9_9ACTN	1.110e-62	84.07	Ku protein (Fragment) n=1 Tax=Actinomycetia bacter...	[more]
A0A7K1B2F3_9ACTN	6.920e-62	84.96	Non-homologous end joining protein Ku n=2 Tax=root...	[more]
A0A539DTX7_9ACTN	1.750e-61	81.42	Non-homologous end joining protein Ku n=1 Tax=Acid...	[more]
A0A3C2AZQ9_9ACTN	1.620e-59	80.36	Non-homologous end joining protein Ku n=1 Tax=Acid...	[more]
A0A7W1HJY9_9ACTN	1.100e-58	80.18	Non-homologous end joining protein Ku n=1 Tax=Acid...	[more]
A0A848UF48_9ACTN	9.300e-58	79.65	Non-homologous end joining protein Ku n=1 Tax=Ilum...	[more]
A0A7W1LS24_9ACTN	1.060e-57	78.76	Non-homologous end joining protein Ku n=1 Tax=Acid...	[more]
A0A7W0KYG8_9ACTN	1.130e-57	76.99	Non-homologous end joining protein Ku n=1 Tax=Acid...	[more]
A0A7W1Z9V7_9ACTN	1.220e-56	77.48	Non-homologous end joining protein Ku n=3 Tax=Acid...	[more]
A0A4R7HYD3_9ACTN	4.490e-56	77.88	Non-homologous end joining protein Ku n=2 Tax=Acid...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006164	Ku70/Ku80 beta-barrel domain	PFAM	PF02735	Ku	coord: 12..113 e-value: 1.7E-19 score: 70.3
IPR016194	SPOC-like, C-terminal domain superfamily	GENE3D	2.40.290.10		coord: 4..113 e-value: 8.7E-9 score: 37.3
IPR016194	SPOC-like, C-terminal domain superfamily	SUPERFAMILY	100939	SPOC domain-like	coord: 1..112
IPR009187	Non-homologous end joining protein Ku, prokaryotic type	PANTHER	PTHR41251	NON-HOMOLOGOUS END JOINING PROTEIN KU	coord: 1..113

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig10215	contig	P-wetherbeei_contig10215:2050..2388 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig10215.3.1	mRNA_P-wetherbeei_contig10215.3.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig10215 2050..2388 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig10215.3.1 ID=prot_P-wetherbeei_contig10215.3.1|Name=mRNA_P-wetherbeei_contig10215.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=113bp
MPRPVWSGTISFGLIAIPIKLFHAVSKKSVSFNQLDERTMSRIKLKKVSA
EDGSDVPDESIVKGYEISKGRYILVDPDELEPFIPSATKTIELEEFVDLV
EIDPVYFDSPYIV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006164	Ku70/Ku80_beta-barrel_dom
IPR016194	SPOC-like_C_dom_sf
IPR009187	Prok_Ku