prot_P-wetherbeei_contig1019.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1019.1.1
Unique Nameprot_P-wetherbeei_contig1019.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length655
Homology
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: D7FW61_ECTSI (Conserved oligomeric Golgi complex subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW61_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 5.990e-69
Identity = 221/642 (34.42%), Postives = 303/642 (47.20%), Query Frame = 0
Query:   46 LAAHEVLATADSVASLLSAQLTRLSRDAWNLVQQGDSVAAAALSTSLYLRSVETLARLANHLRQTLEALSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALVDAAMLVGRVCWLLLGPRGRALRHVLSPPTVLTRPSPDRIGLDQLEAAFEIADTDGDGVMDAEEAAXXXXXXXXXXXXXXXDADGXXXXXXXGWGCQSLTRPEFALFATPLLDEQRPHDFLRECLEHVIGAAVAAWADWALAEPMLALSTAEARVAAGCGGASNSRGDSTLTDEEWRQRHGLWEEKAVELSAAAGDDTVEERMWFPAVVSPPVTCYLQRLTTELCRAMSMADYAVVA-----------DADAGTDANVDI----------LGAAR---TRVAARAAAELAALYGRLCVGSAAPARRACEAMRLQCLLDCFFLSRWLPAGXXXXXXXXXAGDAFVAAAEALCDDIDPINLQIYLPHLRAAARASGDVGRIFLSALFPAA---GGAPXXXXXXXXXXXXXXXGFSRPEELLSAGTNVVALAPRVHRFDLLPLPLP------PAARSGGXXXXXXXAGAVVAGRDGLPGAGGLDAGGRVKAVGGQALARAAGLMGQAESMRQAVQPLSNIFGAASSFLGGGRRK 654
            L AH++LA AD+V SLL++++  L+ DA  L ++GD  AA AL TS YL SV+  A LANHLR  L+ + A                                     ++  DA +L+GRV W+L G  G  L++ L+PP    +    RI   QLEAAF IADT+GDGV+D EEAA                A          +   S T  EF LFAT LL+EQRP   L  CL+ ++  ++A W++WAL E   AL T       GC        +  +T++ WRQ HG+WE+K +EL    GD  ++E + FP +VSP + CY++ +  EL R +S AD    A           DA    D    +           GAAR   +  A RA+++L+     LC G+ + A +ACEA +LQ LLD  FL +W+            +  +  +    LCD +DPINLQIY+PHL+ AA A        LS +F  A     AP                   P+  L + ++ + LAP+V RF++LPL L       P   S         +GA  +G DG PGA    A  R    G QALA   GL     +    VQ   ++FGAAS FLGG  R+
Sbjct:  466 LMAHDILAAADAVVSLLTSEIRNLAGDATCLTERGDQTAADALKTSFYLLSVDMAAGLANHLRIALQEIHACIKSAAEQERRCVPYGGRIGDLENAV-----------SSFADAGLLIGRVAWMLNGRSGGPLQYALTPPACFAQRRRGRIEEQQLEAAFVIADTNGDGVVDTEEAAEALQAVSFG-------ASAALAVDPSRYA--SFTLNEFFLFATRLLEEQRPRQHLTSCLDTLLSESLAVWSEWAL-EKSAALLTE------GCNAMVILCANPGMTNDLWRQAHGIWEDKTIELDRDDGDG-IQETVHFPIMVSPAILCYIEGVAAELSRILSTADLTERAVTESCSGWKTQDAQPSGDEERALGWSAPGKATGQGAARYARSLAAVRASSDLSHALVGLCEGAHSAAAQACEAAQLQLLLDALFLQKWVSDSPK-------SSPSMESVVTTLCDLVDPINLQIYMPHLQTAASACWAACHTPLSLIFEQAIPSSSAPSSASVS-------------PDGALGSSSSFIPLAPKVRRFEILPLSLEVVRLQHPNGSSRSRNSVGIKSGAPASG-DG-PGA---SAQARGLEAGRQALA---GLGSVLSAQNAHVQ---SVFGAASLFLGGRNRR 1048          
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: A0A836CMC2_9STRA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC2_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.210e-10
Identity = 73/231 (31.60%), Postives = 97/231 (41.99%), Query Frame = 0
Query:  170 LLGPRGRALRHVLSPPTVLTRP-----SPDRIGLDQLEAAFEIADTDGDGVMDAEEAAXXXXXXXXXXXXXXXDADGXXXXXXXGWGCQSLTRPEFALFATPLLDEQRPHDF------LRECLEHVIGAAVAAWADWALAEPMLALSTAEARVAAGCGGASNSRGDSTLTDEEWRQRHGL-WEEKAVELSAAAGDDTVEERMWFPAVVSPPVTCYLQRLTTELCRAMSMAD 388
            L G RGR LR  ++ P   +       +   +GLDQLEAAFEIADT+GDG+++ EE                   +             SLT  EFAL ATPLL+EQ  H        L E L  ++  +V  WA+   A     L  A A+ A     A +             QR G  W E  + L +    D+VEER+  PA  +P +  Y+  L  E       AD
Sbjct:  740 LQGRRGRGLRQAVTAPKEGSAGGGAGRAVGLVGLDQLEAAFEIADTNGDGLLEGEEIGEALQAVAFSHADKLAQLEHAHA---------SLTFVEFALLATPLLEEQARHPLEDPLVHLAEGLRSLLARSVKLWANLVAACLNQQLQQALAQTARASAAACHLA-----------QRQGATWHEHRLTLDSDLDGDSVEERVRLPAAATPALQRYVLALAAEAAALSCAAD 950          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW61_ECTSI5.990e-6934.42Conserved oligomeric Golgi complex subunit 1 n=2 T... [more]
A0A836CMC2_9STRA3.210e-1031.60Conserved oligomeric Golgi complex subunit 1 n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 97..117
IPR002048EF-hand domainSMARTSM00054efh_1coord: 200..228
e-value: 0.0041
score: 26.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 196..231
score: 11.33333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1019contigP-wetherbeei_contig1019:1595..3726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1019.1.1mRNA_P-wetherbeei_contig1019.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1019 1595..5233 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1019.1.1 ID=prot_P-wetherbeei_contig1019.1.1|Name=mRNA_P-wetherbeei_contig1019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=655bp
MPRTASSAAWTSCSWPRPPAPSSLMAPGAAAAATAAAGAAPPPPRLAAHE
VLATADSVASLLSAQLTRLSRDAWNLVQQGDSVAAAALSTSLYLRSVETL
ARLANHLRQTLEALSAAAAAALSGGGGGGGGGSSGTAWGLPAAAAAAASA
DEAAALVDAAMLVGRVCWLLLGPRGRALRHVLSPPTVLTRPSPDRIGLDQ
LEAAFEIADTDGDGVMDAEEAAEAVAAVSVAVVAAPFDADGGIGGVGGGW
GCQSLTRPEFALFATPLLDEQRPHDFLRECLEHVIGAAVAAWADWALAEP
MLALSTAEARVAAGCGGASNSRGDSTLTDEEWRQRHGLWEEKAVELSAAA
GDDTVEERMWFPAVVSPPVTCYLQRLTTELCRAMSMADYAVVADADAGTD
ANVDILGAARTRVAARAAAELAALYGRLCVGSAAPARRACEAMRLQCLLD
CFFLSRWLPAGGGGGAAAGGAGDAFVAAAEALCDDIDPINLQIYLPHLRA
AARASGDVGRIFLSALFPAAGGAPGGGAGGGSGGGSGGGGFSRPEELLSA
GTNVVALAPRVHRFDLLPLPLPPAARSGGGGGSAGAAGAVVAGRDGLPGA
GGLDAGGRVKAVGGQALARAAGLMGQAESMRQAVQPLSNIFGAASSFLGG
GRRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom