mRNA_P-wetherbeei_contig1019.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: D7FW61_ECTSI (Conserved oligomeric Golgi complex subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW61_ECTSI) HSP 1 Score: 253 bits (646), Expect = 5.050e-66 Identity = 221/642 (34.42%), Postives = 303/642 (47.20%), Query Frame = 2 Query: 1511 LAAHEVLATADSVASLLSAQLTRLSRDAWNLVQQGDSVAAAALSTSLYLRSVETLARLANHLRQTLEALSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALVDAAMLVGRVCWLLLGPRGRALRHVLSPPTVLTRPSPDRIGLDQLEAAFEIADTDGDGVMDAEEAAXXXXXXXXXXXXXXXDADGXXXXXXXGWGCQSLTRPEFALFATPLLDEQRPHDFLRECLEHVIGAAVAAWADWALAEPMLALSTAEARVAAGCGGASNSRGDSTLTDEEWRQRHGLWEEKAVELSAAAGDDTVEERMWFPAVVSPPVTCYLQRLTTELCRAMSMADYAVVA-----------DADAGTDANVDI----------LGAAR---TRVAARAAAELAALYGRLCVGSAAPARRACEAMRLQCLLDCFFLSRWLPAGXXXXXXXXXAGDAFVAAAEALCDDIDPINLQIYLPHLRAAARASGDVGRIFLSALFPAA---GGAPXXXXXXXXXXXXXXXGFSRPEELLSAGTNVVALAPRVHRFDLLPLPLP------PAARSGGXXXXXXXAGAVVAGRDGLPGAGGLDAGGRVKAVGGQALARAAGLMGQAESMRQAVQPLSNIFGAASSFLGGGRRK 3337 L AH++LA AD+V SLL++++ L+ DA L ++GD AA AL TS YL SV+ A LANHLR L+ + A ++ DA +L+GRV W+L G G L++ L+PP + RI QLEAAF IADT+GDGV+D EEAA A + S T EF LFAT LL+EQRP L CL+ ++ ++A W++WAL E AL T GC + +T++ WRQ HG+WE+K +EL GD ++E + FP +VSP + CY++ + EL R +S AD A DA D + GAAR + A RA+++L+ LC G+ + A +ACEA +LQ LLD FL +W+ + + + LCD +DPINLQIY+PHL+ AA A LS +F A AP P+ L + ++ + LAP+V RF++LPL L P S +GA +G DG PGA A R G QALA GL + VQ ++FGAAS FLGG R+ Sbjct: 466 LMAHDILAAADAVVSLLTSEIRNLAGDATCLTERGDQTAADALKTSFYLLSVDMAAGLANHLRIALQEIHACIKSAAEQERRCVPYGGRIGDLENAV-----------SSFADAGLLIGRVAWMLNGRSGGPLQYALTPPACFAQRRRGRIEEQQLEAAFVIADTNGDGVVDTEEAAEALQAVSFG-------ASAALAVDPSRYA--SFTLNEFFLFATRLLEEQRPRQHLTSCLDTLLSESLAVWSEWAL-EKSAALLTE------GCNAMVILCANPGMTNDLWRQAHGIWEDKTIELDRDDGDG-IQETVHFPIMVSPAILCYIEGVAAELSRILSTADLTERAVTESCSGWKTQDAQPSGDEERALGWSAPGKATGQGAARYARSLAAVRASSDLSHALVGLCEGAHSAAAQACEAAQLQLLLDALFLQKWVSDSPK-------SSPSMESVVTTLCDLVDPINLQIYMPHLQTAASACWAACHTPLSLIFEQAIPSSSAPSSASVS-------------PDGALGSSSSFIPLAPKVRRFEILPLSLEVVRLQHPNGSSRSRNSVGIKSGAPASG-DG-PGA---SAQARGLEAGRQALA---GLGSVLSAQNAHVQ---SVFGAASLFLGGRNRR 1048
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: A0A836CMC2_9STRA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC2_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.730e-29 Identity = 154/508 (30.31%), Postives = 217/508 (42.72%), Query Frame = 1 Query: 1 ERALEVLNVPDAWALLFRRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGALHSAGASENEGIVARKEAAKVGTGKSGASAAT-------RLLLNAPSAIWAALDDSRYLDAAALFRQCAA------AVASSEGI-------MRGPEAPFLASQWTYIQQFPARILAGAKRALYRPAVFAAGSPSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GAVARARRLEVHLCAAVAAIQQTIVDVQAIFADN-LGEEASAKGSSTGSGKSASLLAELVSSAWGRPNGPAAAPLTVPPLPAAAA-AELCTRWLAVVVPKVFRRSKALLRGVADAAALAHTREALWTLTRRGSSGSGCGGSGADDDANRWRAACAYAVNGKLLAALLKCRGFAAGAAV-----ADGPLAPPGGP-----LELWPLLFSQTFADLAQRLLQDSLADAADRVIRRLDIVL 1416 ERALE DA ALL + DV K+ +L+ MV SRYHELIESAD++V+M++ ++V +LL A P+ +L L + RK + TGKS +SA + RL+LNAP+AIW+ALD L+AA +F +CAA A A+ + + +A F+ +QW + QFPARI A L R A AA + G+V R E LCAAV ++ T++DV A F L +A ++GS P + ++WLA ++P+V RR+ A+L G AA LA REALWT+TR G GG + W ACA V+ + L G G A GP P GG L+LW LLFS+TFA+L Q +++ S+A + + +D + Sbjct: 36 ERALEYATAEDARALLVKAAEDVGVKQAELRGMVSSRYHELIESADSVVAMQQLTSEVLSLLDALPTDCRHLLKLGAQVLEPHHLEDQH--PPRKP---LQTGKSDSSAVSANQDSTVRLMLNAPAAIWSALDAGHLLEAATIFMRCAAVMRGGAAAAADQSVPLVQQLRQGSVDAAFVQAQWACMLQFPARISHTALALLSRSAAAAAVDALAALVLLHDHLPHGSNGDSSSGNDSGDAYHHAFRTFLAAREAAIAAALRGARGGAAADGSVPADRSRERALCAAVQLLRATLLDVHAAFVTGTLRSRVAAALEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGEGEWRRVLSQWLAALLPRVHRRAAAVLGGAHGAAELAAVREALWTVTRNGG-----GGHAPTGGRSEWGVACAALVDRGAVEVGLVRAGVVGGGGRWGRRGARGP--PVGGGYDDAGLDLWALLFSRTFAELGQGMVKSSMAQVKAQALAHIDAAI 531
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: A0A7S3YF54_HETAK (Conserved oligomeric Golgi complex subunit 1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF54_HETAK) HSP 1 Score: 64.3 bits (155), Expect = 2.310e-8 Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 1 ERALEVLNVPDAWALLFRRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGAL 240 E+ LE L + + +L +V K+ +LQ+MVGSRYHE+I+SAD+IV M++ V LL AFP +++ V AL Sbjct: 47 EKILESLPIEEVQRMLKDSNRNVQTKQTELQLMVGSRYHEIIDSADSIVEMKEEVQQVVELLIAFPKDYKGLVENVPKAL 126
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: A0A2P6MVW1_9EUKA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MVW1_9EUKA) HSP 1 Score: 66.6 bits (161), Expect = 2.760e-7 Identity = 46/180 (25.56%), Postives = 86/180 (47.78%), Query Frame = 1 Query: 4 RALEVLNVPDAWALLFRRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGALHSAGASENEGIVARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALFRQCAAAVASSEGIMRGP-------EAPFLASQWTYIQQFPARIL 522 + L+V + + R + E++ +L+++VG+RY +LI+SAD IV MR+ + + + + VL E +L ++ + E + G + + ++L++ P IW ++++RYL+A+ L+ + S EG P L QW+ I QFP +IL Sbjct: 153 KLFNTLSVEEIRSKEMNMRKETEERRQELRVLVGARYRDLIDSADTIVEMRELSKEAYQKMNRVETGCKKVLGLREDSLLAS-------TTGKMEEKNLRRGNTSTAKKIKILVDTPEQIWREIENNRYLEASQLYLRAKETHQSMEGASDAKTIASIHGSIPLLLHQWSTISQFPPKIL 325
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: A0A433PVZ8_9FUNG (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PVZ8_9FUNG) HSP 1 Score: 66.6 bits (161), Expect = 2.840e-7 Identity = 52/173 (30.06%), Postives = 84/173 (48.55%), Query Frame = 1 Query: 22 NVPDAWALLFRRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGALHSAGASENEGIVARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALFRQCAAAV----ASSEGIMRGPEA--PFLASQWTYIQQFPARIL 522 ++PD + + RAD+ K+ +L++MVG RY +LI +ADAIVSMRK A V +L N ++ ++ + N+ + + + T A+A +LL++ P IW AL+ YL AA L+ A E +M E P + QW + F +I+ Sbjct: 88 SIPDLRLMEKKTRADIESKRQELRLMVGERYRDLISAADAIVSMRKNALSVQDMLDKMQDSCN--VNAIKRRASAMLPGRNKDVATEQRKRYLYT----AAAQIKLLVDVPEQIWHALEQDHYLTAARLYLIAKVVYKNLQAEQEDMMFTVETTFPVVQRQWDAVSHFKTQIV 254
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: U9TL26_RHIID (Conserved oligomeric Golgi complex subunit 1 n=9 Tax=Rhizophagus TaxID=1129544 RepID=U9TL26_RHIID) HSP 1 Score: 65.5 bits (158), Expect = 6.080e-7 Identity = 55/184 (29.89%), Postives = 91/184 (49.46%), Query Frame = 1 Query: 22 NVPDAWALLFRRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLD--EVEGALHSAGASENEGIVARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALFRQCAAAVASSEGIMRGPEAPFLAS--------QWTYIQQFPARILAGAKRAL 543 ++P+ +L R R+D+ EKK +L++MVG RY +LI++AD+IV+MRK A + +L+ + D +V S NE K+ K S A +LL++ P IW +L+ +YL+A+ L+ A + + + PF S QW + F ++IL A+ L Sbjct: 29 SIPELRSLEKRTRSDIEEKKQELRLMVGERYRDLIDAADSIVNMRKCALSI-------QEELHHMQDSCDVHALKRSVRTQVNEDNKGTKDEKKHHLYSSAAQ--IKLLVDVPEQIWRSLESHKYLNASRLYL---IAKLVYKNLQAHDDTPFNVSVTFPVVQRQWDAVSHFKSQILQKARHYL 200
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: A0A6P7T825_OCTVU (Conserved oligomeric Golgi complex subunit 1 n=2 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7T825_OCTVU) HSP 1 Score: 63.9 bits (154), Expect = 1.750e-6 Identity = 52/177 (29.38%), Postives = 86/177 (48.59%), Query Frame = 1 Query: 52 RRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGALHSAGASENEGIVARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALF-------------RQCAAAVASSEGIMRGPEAPFLASQWTYIQQFPARILAGAKRAL 543 + R D+ KK +L+IMVG RY +LIE+AD I M+K++ +V + S++ + +++ + G S +A K + ++ +LLL+ P +W+A+D +L AA F QC+A++ S P L+ QWT I F A IL G ++ L Sbjct: 35 KNRLDIERKKEELRIMVGERYRDLIEAADTITDMKKSSQNVMNSI----SKIEELCKQLKQNHLAKGTSYIHRPLADKSRKQTENHFYSVASQIKLLLDMPEKMWSAVDSQEFLLAAQAFLLSRHVHTGLQLEAQCSASILSCF--------PVLSRQWTAISHFKATILQGCRKLL 199
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: UPI001CF4FDA9 (conserved oligomeric Golgi complex subunit 1-like n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF4FDA9) HSP 1 Score: 63.9 bits (154), Expect = 1.850e-6 Identity = 47/180 (26.11%), Postives = 85/180 (47.22%), Query Frame = 1 Query: 25 VPDAWALLFRRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGALHSAGASENEGIVARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALF---RQCAAAVASSEGIMRGPEA----PFLASQWTYIQQFPARILAGAKRAL 543 V + A+ + R+D+ KK DL++MVG RY +LI++AD + M+ + V +F + E+ + G ++ + + ++ G ++ +LL+N P +W+AL+ ++L AA L+ R + + G P+ P L QW I F IL G++ L Sbjct: 47 VVEIRAVEHKTRSDIERKKEDLRLMVGERYRDLIDAADTVTEMKTCSKQV----MSFVQDIQKQCKELHSSHRCHGFGGSQSVANTESTSQTKAGFYTIASQMKLLVNTPEKVWSALERKQHLKAAQLYLFSRHIVSILHIDTGDSSAPKLLSSFPILPKQWAAISHFKDSILQGSRALL 222
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: A0A2C9LUZ1_BIOGL (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LUZ1_BIOGL) HSP 1 Score: 62.8 bits (151), Expect = 4.100e-6 Identity = 52/171 (30.41%), Postives = 84/171 (49.12%), Query Frame = 1 Query: 52 RRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDE--VEGALHSAGASENEGIVARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALF---RQCAAAVASSEGIMRGPEA--PFLASQWTYIQQFPARILAGAKRAL 543 + R+D+ +KK DL++MVG RY +LI++AD I M+ +A +V ++ +S+ + V GA +N+ RKE GT +A +LL++ P IW+ +D YL A L+ R A++ + P L QW I F + IL G ++ L Sbjct: 36 KTRSDIEKKKEDLRVMVGERYRDLIDAADTITDMKNSAENVMKSISRMEDLCSSMRQKHMVRGASFHMSV-KNDSDKNRKELEFYGT-----AAQIKLLMDIPEKIWSNVDSQEYLKATQLYLLARHINASLHLDTQLSADVATWFPVLTRQWAAISHFKSTILQGCRQLL 200
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: K1QV15_CRAGI (Conserved oligomeric Golgi complex subunit 1 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=K1QV15_CRAGI) HSP 1 Score: 61.6 bits (148), Expect = 9.190e-6 Identity = 52/172 (30.23%), Postives = 82/172 (47.67%), Query Frame = 1 Query: 58 RADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGALHSAGASENEGI-VARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALFR-----QCAAAVASSEGIMRGPEAPFLASQWTYIQQFPARILAGAKRALYRPA 555 RAD+ KK DL+IMVG RY +LIE+AD I M+ +A +V + + +++ + +++ G S + + + K G ++ +LLL+ P IW+ALD+ YL A F + + S + P L QW I F IL G + L +PA Sbjct: 8 RADIERKKEDLRIMVGERYRDLIEAADTITEMKNSAQNVMSSI----AKMEDMCRQLKQRHMVRGTSFQQRLSTGHQGGKKQEVHFYGIASQIKLLLDMPEKIWSALDEEDYLTATQHFLLSRHIHTSLQLESQQSGNLLSMFPVLTRQWAAISHFRTTILQGCRNVLKQPA 175 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1019.1.1 >prot_P-wetherbeei_contig1019.1.1 ID=prot_P-wetherbeei_contig1019.1.1|Name=mRNA_P-wetherbeei_contig1019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=655bp MPRTASSAAWTSCSWPRPPAPSSLMAPGAAAAATAAAGAAPPPPRLAAHEback to top mRNA from alignment at P-wetherbeei_contig1019:1595..5233- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1019.1.1 ID=mRNA_P-wetherbeei_contig1019.1.1|Name=mRNA_P-wetherbeei_contig1019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3639bp|location=Sequence derived from alignment at P-wetherbeei_contig1019:1595..5233- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1019:1595..5233- >mRNA_P-wetherbeei_contig1019.1.1 ID=mRNA_P-wetherbeei_contig1019.1.1|Name=mRNA_P-wetherbeei_contig1019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1965bp|location=Sequence derived from alignment at P-wetherbeei_contig1019:1595..5233- (Phaeothamnion wetherbeei SAG_119_79)back to top |