mRNA_P-wetherbeei_contig1019.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1019.1.1
Unique NamemRNA_P-wetherbeei_contig1019.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: D7FW61_ECTSI (Conserved oligomeric Golgi complex subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW61_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 5.050e-66
Identity = 221/642 (34.42%), Postives = 303/642 (47.20%), Query Frame = 2
Query: 1511 LAAHEVLATADSVASLLSAQLTRLSRDAWNLVQQGDSVAAAALSTSLYLRSVETLARLANHLRQTLEALSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALVDAAMLVGRVCWLLLGPRGRALRHVLSPPTVLTRPSPDRIGLDQLEAAFEIADTDGDGVMDAEEAAXXXXXXXXXXXXXXXDADGXXXXXXXGWGCQSLTRPEFALFATPLLDEQRPHDFLRECLEHVIGAAVAAWADWALAEPMLALSTAEARVAAGCGGASNSRGDSTLTDEEWRQRHGLWEEKAVELSAAAGDDTVEERMWFPAVVSPPVTCYLQRLTTELCRAMSMADYAVVA-----------DADAGTDANVDI----------LGAAR---TRVAARAAAELAALYGRLCVGSAAPARRACEAMRLQCLLDCFFLSRWLPAGXXXXXXXXXAGDAFVAAAEALCDDIDPINLQIYLPHLRAAARASGDVGRIFLSALFPAA---GGAPXXXXXXXXXXXXXXXGFSRPEELLSAGTNVVALAPRVHRFDLLPLPLP------PAARSGGXXXXXXXAGAVVAGRDGLPGAGGLDAGGRVKAVGGQALARAAGLMGQAESMRQAVQPLSNIFGAASSFLGGGRRK 3337
            L AH++LA AD+V SLL++++  L+ DA  L ++GD  AA AL TS YL SV+  A LANHLR  L+ + A                                     ++  DA +L+GRV W+L G  G  L++ L+PP    +    RI   QLEAAF IADT+GDGV+D EEAA                A          +   S T  EF LFAT LL+EQRP   L  CL+ ++  ++A W++WAL E   AL T       GC        +  +T++ WRQ HG+WE+K +EL    GD  ++E + FP +VSP + CY++ +  EL R +S AD    A           DA    D    +           GAAR   +  A RA+++L+     LC G+ + A +ACEA +LQ LLD  FL +W+            +  +  +    LCD +DPINLQIY+PHL+ AA A        LS +F  A     AP                   P+  L + ++ + LAP+V RF++LPL L       P   S         +GA  +G DG PGA    A  R    G QALA   GL     +    VQ   ++FGAAS FLGG  R+
Sbjct:  466 LMAHDILAAADAVVSLLTSEIRNLAGDATCLTERGDQTAADALKTSFYLLSVDMAAGLANHLRIALQEIHACIKSAAEQERRCVPYGGRIGDLENAV-----------SSFADAGLLIGRVAWMLNGRSGGPLQYALTPPACFAQRRRGRIEEQQLEAAFVIADTNGDGVVDTEEAAEALQAVSFG-------ASAALAVDPSRYA--SFTLNEFFLFATRLLEEQRPRQHLTSCLDTLLSESLAVWSEWAL-EKSAALLTE------GCNAMVILCANPGMTNDLWRQAHGIWEDKTIELDRDDGDG-IQETVHFPIMVSPAILCYIEGVAAELSRILSTADLTERAVTESCSGWKTQDAQPSGDEERALGWSAPGKATGQGAARYARSLAAVRASSDLSHALVGLCEGAHSAAAQACEAAQLQLLLDALFLQKWVSDSPK-------SSPSMESVVTTLCDLVDPINLQIYMPHLQTAASACWAACHTPLSLIFEQAIPSSSAPSSASVS-------------PDGALGSSSSFIPLAPKVRRFEILPLSLEVVRLQHPNGSSRSRNSVGIKSGAPASG-DG-PGA---SAQARGLEAGRQALA---GLGSVLSAQNAHVQ---SVFGAASLFLGGRNRR 1048          
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: A0A836CMC2_9STRA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC2_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.730e-29
Identity = 154/508 (30.31%), Postives = 217/508 (42.72%), Query Frame = 1
Query:    1 ERALEVLNVPDAWALLFRRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGALHSAGASENEGIVARKEAAKVGTGKSGASAAT-------RLLLNAPSAIWAALDDSRYLDAAALFRQCAA------AVASSEGI-------MRGPEAPFLASQWTYIQQFPARILAGAKRALYRPAVFAAGSPSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GAVARARRLEVHLCAAVAAIQQTIVDVQAIFADN-LGEEASAKGSSTGSGKSASLLAELVSSAWGRPNGPAAAPLTVPPLPAAAA-AELCTRWLAVVVPKVFRRSKALLRGVADAAALAHTREALWTLTRRGSSGSGCGGSGADDDANRWRAACAYAVNGKLLAALLKCRGFAAGAAV-----ADGPLAPPGGP-----LELWPLLFSQTFADLAQRLLQDSLADAADRVIRRLDIVL 1416
            ERALE     DA ALL +   DV  K+ +L+ MV SRYHELIESAD++V+M++  ++V +LL A P+    +L      L      +      RK    + TGKS +SA +       RL+LNAP+AIW+ALD    L+AA +F +CAA      A A+ + +           +A F+ +QW  + QFPARI   A   L R A  AA    +                                                        G+V   R  E  LCAAV  ++ T++DV A F    L    +A   ++GS                               P       + ++WLA ++P+V RR+ A+L G   AA LA  REALWT+TR G      GG       + W  ACA  V+   +   L   G   G        A GP  P GG      L+LW LLFS+TFA+L Q +++ S+A    + +  +D  +
Sbjct:   36 ERALEYATAEDARALLVKAAEDVGVKQAELRGMVSSRYHELIESADSVVAMQQLTSEVLSLLDALPTDCRHLLKLGAQVLEPHHLEDQH--PPRKP---LQTGKSDSSAVSANQDSTVRLMLNAPAAIWSALDAGHLLEAATIFMRCAAVMRGGAAAAADQSVPLVQQLRQGSVDAAFVQAQWACMLQFPARISHTALALLSRSAAAAAVDALAALVLLHDHLPHGSNGDSSSGNDSGDAYHHAFRTFLAAREAAIAAALRGARGGAAADGSVPADRSRERALCAAVQLLRATLLDVHAAFVTGTLRSRVAAALEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGEGEWRRVLSQWLAALLPRVHRRAAAVLGGAHGAAELAAVREALWTVTRNGG-----GGHAPTGGRSEWGVACAALVDRGAVEVGLVRAGVVGGGGRWGRRGARGP--PVGGGYDDAGLDLWALLFSRTFAELGQGMVKSSMAQVKAQALAHIDAAI 531          
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: A0A7S3YF54_HETAK (Conserved oligomeric Golgi complex subunit 1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF54_HETAK)

HSP 1 Score: 64.3 bits (155), Expect = 2.310e-8
Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 1
Query:    1 ERALEVLNVPDAWALLFRRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGAL 240
            E+ LE L + +   +L     +V  K+ +LQ+MVGSRYHE+I+SAD+IV M++    V  LL AFP     +++ V  AL
Sbjct:   47 EKILESLPIEEVQRMLKDSNRNVQTKQTELQLMVGSRYHEIIDSADSIVEMKEEVQQVVELLIAFPKDYKGLVENVPKAL 126          
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: A0A2P6MVW1_9EUKA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MVW1_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 2.760e-7
Identity = 46/180 (25.56%), Postives = 86/180 (47.78%), Query Frame = 1
Query:    4 RALEVLNVPDAWALLFRRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGALHSAGASENEGIVARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALFRQCAAAVASSEGIMRGP-------EAPFLASQWTYIQQFPARIL 522
            +    L+V +  +     R +  E++ +L+++VG+RY +LI+SAD IV MR+ + +    +    +    VL   E +L ++          + E   +  G +  +   ++L++ P  IW  ++++RYL+A+ L+ +      S EG              P L  QW+ I QFP +IL
Sbjct:  153 KLFNTLSVEEIRSKEMNMRKETEERRQELRVLVGARYRDLIDSADTIVEMRELSKEAYQKMNRVETGCKKVLGLREDSLLAS-------TTGKMEEKNLRRGNTSTAKKIKILVDTPEQIWREIENNRYLEASQLYLRAKETHQSMEGASDAKTIASIHGSIPLLLHQWSTISQFPPKIL 325          
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: A0A433PVZ8_9FUNG (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PVZ8_9FUNG)

HSP 1 Score: 66.6 bits (161), Expect = 2.840e-7
Identity = 52/173 (30.06%), Postives = 84/173 (48.55%), Query Frame = 1
Query:   22 NVPDAWALLFRRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGALHSAGASENEGIVARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALFRQCAAAV----ASSEGIMRGPEA--PFLASQWTYIQQFPARIL 522
            ++PD   +  + RAD+  K+ +L++MVG RY +LI +ADAIVSMRK A  V  +L       N  ++ ++    +     N+ +   +    + T    A+A  +LL++ P  IW AL+   YL AA L+           A  E +M   E   P +  QW  +  F  +I+
Sbjct:   88 SIPDLRLMEKKTRADIESKRQELRLMVGERYRDLISAADAIVSMRKNALSVQDMLDKMQDSCN--VNAIKRRASAMLPGRNKDVATEQRKRYLYT----AAAQIKLLVDVPEQIWHALEQDHYLTAARLYLIAKVVYKNLQAEQEDMMFTVETTFPVVQRQWDAVSHFKTQIV 254          
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: U9TL26_RHIID (Conserved oligomeric Golgi complex subunit 1 n=9 Tax=Rhizophagus TaxID=1129544 RepID=U9TL26_RHIID)

HSP 1 Score: 65.5 bits (158), Expect = 6.080e-7
Identity = 55/184 (29.89%), Postives = 91/184 (49.46%), Query Frame = 1
Query:   22 NVPDAWALLFRRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLD--EVEGALHSAGASENEGIVARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALFRQCAAAVASSEGIMRGPEAPFLAS--------QWTYIQQFPARILAGAKRAL 543
            ++P+  +L  R R+D+ EKK +L++MVG RY +LI++AD+IV+MRK A  +         +L+ + D  +V     S     NE     K+  K     S A    +LL++ P  IW +L+  +YL+A+ L+     A    + +    + PF  S        QW  +  F ++IL  A+  L
Sbjct:   29 SIPELRSLEKRTRSDIEEKKQELRLMVGERYRDLIDAADSIVNMRKCALSI-------QEELHHMQDSCDVHALKRSVRTQVNEDNKGTKDEKKHHLYSSAAQ--IKLLVDVPEQIWRSLESHKYLNASRLYL---IAKLVYKNLQAHDDTPFNVSVTFPVVQRQWDAVSHFKSQILQKARHYL 200          
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: A0A6P7T825_OCTVU (Conserved oligomeric Golgi complex subunit 1 n=2 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7T825_OCTVU)

HSP 1 Score: 63.9 bits (154), Expect = 1.750e-6
Identity = 52/177 (29.38%), Postives = 86/177 (48.59%), Query Frame = 1
Query:   52 RRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGALHSAGASENEGIVARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALF-------------RQCAAAVASSEGIMRGPEAPFLASQWTYIQQFPARILAGAKRAL 543
            + R D+  KK +L+IMVG RY +LIE+AD I  M+K++ +V   +    S++  +  +++    + G S     +A K   +        ++  +LLL+ P  +W+A+D   +L AA  F              QC+A++ S          P L+ QWT I  F A IL G ++ L
Sbjct:   35 KNRLDIERKKEELRIMVGERYRDLIEAADTITDMKKSSQNVMNSI----SKIEELCKQLKQNHLAKGTSYIHRPLADKSRKQTENHFYSVASQIKLLLDMPEKMWSAVDSQEFLLAAQAFLLSRHVHTGLQLEAQCSASILSCF--------PVLSRQWTAISHFKATILQGCRKLL 199          
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: UPI001CF4FDA9 (conserved oligomeric Golgi complex subunit 1-like n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF4FDA9)

HSP 1 Score: 63.9 bits (154), Expect = 1.850e-6
Identity = 47/180 (26.11%), Postives = 85/180 (47.22%), Query Frame = 1
Query:   25 VPDAWALLFRRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGALHSAGASENEGIVARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALF---RQCAAAVASSEGIMRGPEA----PFLASQWTYIQQFPARILAGAKRAL 543
            V +  A+  + R+D+  KK DL++MVG RY +LI++AD +  M+  +  V     +F   +     E+  +    G   ++ +   +  ++   G    ++  +LL+N P  +W+AL+  ++L AA L+   R   + +    G    P+     P L  QW  I  F   IL G++  L
Sbjct:   47 VVEIRAVEHKTRSDIERKKEDLRLMVGERYRDLIDAADTVTEMKTCSKQV----MSFVQDIQKQCKELHSSHRCHGFGGSQSVANTESTSQTKAGFYTIASQMKLLVNTPEKVWSALERKQHLKAAQLYLFSRHIVSILHIDTGDSSAPKLLSSFPILPKQWAAISHFKDSILQGSRALL 222          
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: A0A2C9LUZ1_BIOGL (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LUZ1_BIOGL)

HSP 1 Score: 62.8 bits (151), Expect = 4.100e-6
Identity = 52/171 (30.41%), Postives = 84/171 (49.12%), Query Frame = 1
Query:   52 RRRADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDE--VEGALHSAGASENEGIVARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALF---RQCAAAVASSEGIMRGPEA--PFLASQWTYIQQFPARILAGAKRAL 543
            + R+D+ +KK DL++MVG RY +LI++AD I  M+ +A +V   ++      +S+  +  V GA       +N+    RKE    GT     +A  +LL++ P  IW+ +D   YL A  L+   R   A++     +        P L  QW  I  F + IL G ++ L
Sbjct:   36 KTRSDIEKKKEDLRVMVGERYRDLIDAADTITDMKNSAENVMKSISRMEDLCSSMRQKHMVRGASFHMSV-KNDSDKNRKELEFYGT-----AAQIKLLMDIPEKIWSNVDSQEYLKATQLYLLARHINASLHLDTQLSADVATWFPVLTRQWAAISHFKSTILQGCRQLL 200          
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Match: K1QV15_CRAGI (Conserved oligomeric Golgi complex subunit 1 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=K1QV15_CRAGI)

HSP 1 Score: 61.6 bits (148), Expect = 9.190e-6
Identity = 52/172 (30.23%), Postives = 82/172 (47.67%), Query Frame = 1
Query:   58 RADVAEKKNDLQIMVGSRYHELIESADAIVSMRKTAADVAALLTAFPSQLNSVLDEVEGALHSAGASENEGI-VARKEAAKVGTGKSGASAATRLLLNAPSAIWAALDDSRYLDAAALFR-----QCAAAVASSEGIMRGPEAPFLASQWTYIQQFPARILAGAKRALYRPA 555
            RAD+  KK DL+IMVG RY +LIE+AD I  M+ +A +V + +    +++  +  +++      G S  + +    +   K      G ++  +LLL+ P  IW+ALD+  YL A   F        +  + S +        P L  QW  I  F   IL G +  L +PA
Sbjct:    8 RADIERKKEDLRIMVGERYRDLIEAADTITEMKNSAQNVMSSI----AKMEDMCRQLKQRHMVRGTSFQQRLSTGHQGGKKQEVHFYGIASQIKLLLDMPEKIWSALDEEDYLTATQHFLLSRHIHTSLQLESQQSGNLLSMFPVLTRQWAAISHFRTTILQGCRNVLKQPA 175          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1019.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FW61_ECTSI5.050e-6634.42Conserved oligomeric Golgi complex subunit 1 n=2 T... [more]
A0A836CMC2_9STRA1.730e-2930.31Conserved oligomeric Golgi complex subunit 1 n=1 T... [more]
A0A7S3YF54_HETAK2.310e-841.25Conserved oligomeric Golgi complex subunit 1 (Frag... [more]
A0A2P6MVW1_9EUKA2.760e-725.56Conserved oligomeric Golgi complex subunit 1 n=1 T... [more]
A0A433PVZ8_9FUNG2.840e-730.06Conserved oligomeric Golgi complex subunit 1 n=1 T... [more]
U9TL26_RHIID6.080e-729.89Conserved oligomeric Golgi complex subunit 1 n=9 T... [more]
A0A6P7T825_OCTVU1.750e-629.38Conserved oligomeric Golgi complex subunit 1 n=2 T... [more]
UPI001CF4FDA91.850e-626.11conserved oligomeric Golgi complex subunit 1-like ... [more]
A0A2C9LUZ1_BIOGL4.100e-630.41Conserved oligomeric Golgi complex subunit 1 n=1 T... [more]
K1QV15_CRAGI9.190e-630.23Conserved oligomeric Golgi complex subunit 1 n=3 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1019contigP-wetherbeei_contig1019:1595..5233 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FW61
PFAMsVps51
Model size3340
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue9.81e-70
EggNOG OGs2E98P@1|root,2SFMQ@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_003520.1
DescriptionVps51/Vps67
Cds size1965
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185858.0295608-CDS-P-wetherbeei_contig1019:1594..25831683185858.0295608-CDS-P-wetherbeei_contig1019:1594..2583Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1019 1595..2583 -
1683185858.0392962-CDS-P-wetherbeei_contig1019:2646..35521683185858.0392962-CDS-P-wetherbeei_contig1019:2646..3552Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1019 2647..3552 -
1683185858.0479162-CDS-P-wetherbeei_contig1019:3656..37261683185858.0479162-CDS-P-wetherbeei_contig1019:3656..3726Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1019 3657..3726 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185858.0577075-UTR-P-wetherbeei_contig1019:3726..44381683185858.0577075-UTR-P-wetherbeei_contig1019:3726..4438Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1019 3727..4438 -
1683185858.0647624-UTR-P-wetherbeei_contig1019:4570..52331683185858.0647624-UTR-P-wetherbeei_contig1019:4570..5233Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1019 4571..5233 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1019.1.1prot_P-wetherbeei_contig1019.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1019 1595..3726 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1019.1.1

>prot_P-wetherbeei_contig1019.1.1 ID=prot_P-wetherbeei_contig1019.1.1|Name=mRNA_P-wetherbeei_contig1019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=655bp
MPRTASSAAWTSCSWPRPPAPSSLMAPGAAAAATAAAGAAPPPPRLAAHE
VLATADSVASLLSAQLTRLSRDAWNLVQQGDSVAAAALSTSLYLRSVETL
ARLANHLRQTLEALSAAAAAALSGGGGGGGGGSSGTAWGLPAAAAAAASA
DEAAALVDAAMLVGRVCWLLLGPRGRALRHVLSPPTVLTRPSPDRIGLDQ
LEAAFEIADTDGDGVMDAEEAAEAVAAVSVAVVAAPFDADGGIGGVGGGW
GCQSLTRPEFALFATPLLDEQRPHDFLRECLEHVIGAAVAAWADWALAEP
MLALSTAEARVAAGCGGASNSRGDSTLTDEEWRQRHGLWEEKAVELSAAA
GDDTVEERMWFPAVVSPPVTCYLQRLTTELCRAMSMADYAVVADADAGTD
ANVDILGAARTRVAARAAAELAALYGRLCVGSAAPARRACEAMRLQCLLD
CFFLSRWLPAGGGGGAAAGGAGDAFVAAAEALCDDIDPINLQIYLPHLRA
AARASGDVGRIFLSALFPAAGGAPGGGAGGGSGGGSGGGGFSRPEELLSA
GTNVVALAPRVHRFDLLPLPLPPAARSGGGGGSAGAAGAVVAGRDGLPGA
GGLDAGGRVKAVGGQALARAAGLMGQAESMRQAVQPLSNIFGAASSFLGG
GRRK*
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mRNA from alignment at P-wetherbeei_contig1019:1595..5233-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1019.1.1 ID=mRNA_P-wetherbeei_contig1019.1.1|Name=mRNA_P-wetherbeei_contig1019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3639bp|location=Sequence derived from alignment at P-wetherbeei_contig1019:1595..5233- (Phaeothamnion wetherbeei SAG_119_79)
GAGCGCGCCTTGGAAGTGCTCAATGTACCCGATGCCTGGGCACTCCTGTT TCGTCGCCGCGCAGATGTGGCTGAAAAGAAGAATGACTTGCAGATTATGG TCGGGTCACGATACCACGAGCTTATCGAGTCTGCGGATGCCATCGTGTCC ATGCGCAAGACTGCCGCTGATGTTGCTGCCCTCCTCACTGCTTTCCCCAG TCAGCTGAATTCGGTTTTGGACGAGGTGGAGGGAGCCCTTCATAGCGCGG GTGCCTCCGAAAATGAGGGCATCGTCGCGAGAAAGGAGGCTGCAAAAGTA GGGACCGGAAAAAGTGGTGCCAGTGCCGCGACGCGCCTCTTGCTGAACGC GCCTTCTGCCATATGGGCGGCGCTGGACGACAGCAGGTACCTCGACGCCG CCGCGCTCTTTCGGCAATGTGCCGCGGCCGTCGCATCCAGCGAGGGCATC ATGCGCGGCCCCGAGGCGCCCTTCTTAGCGAGCCAATGGACCTACATTCA GCAGTTTCCGGCTCGCATCCTCGCCGGCGCCAAGCGGGCGCTGTACCGTC CGGCGGTTTTCGCCGCCGGATCTCCCAGTAGCGACAACGGCGGCGGCAGC AGCGTCGGCGAAGCAGCGGCGGCGCTGGCAGCCGTGCTTCTCGTAGAAGA TGTCGACGGCGGCGTCCCGGCTGCGCCAGGCCCGGCGCTGTTCTCGGACG CGCTGCAGCTCCTCTTGCGGCACCGGGGCCGCTACGTGGAAGCCGCGCTG CTCGGCAAAAGCAGGGACTCGCCCAGCGGGGCTCCCACAGAGCAGCGACG GCGACGACGGCGGCCTCGGACCGACGGCGGCGGCGGCGACGGCGGTGCGG TGGCGGGCGGCGGCGCCGCGGGGGCGGTGGCGCGCGCCCGGAGGCTGGAA GTGCACCTCTGCGCCGCGGTTGCCGCCATCCAGCAGACCATCGTGGACGT CCAAGCCATTTTTGCGGATAATTTAGGCGAGGAAGCTTCAGCAAAAGGTT CTTCAACCGGCAGCGGCAAAAGTGCATCCCTGCTGGCCGAGCTCGTGTCT TCGGCATGGGGGCGGCCGAACGGGCCTGCTGCGGCACCGCTCACAGTGCC GCCGCTGCCCGCTGCGGCGGCCGCCGAGCTGTGCACCCGCTGGCTGGCAG TGGTGGTGCCGAAGGTGTTCCGCCGCAGCAAGGCACTGCTGCGGGGCGTC GCCGACGCGGCGGCCCTTGCCCACACCCGAGAGGCGCTCTGGACGCTGAC GCGGCGTGGAAGCAGCGGCAGTGGCTGTGGCGGCAGCGGCGCGGATGACG ATGCCAACCGCTGGCGGGCCGCCTGCGCCTACGCCGTAAACGGCAAGCTC CTGGCGGCGCTGCTGAAGTGCCGTGGCTTTGCGGCTGGGGCAGCGGTGGC AGACGGCCCGCTGGCGCCGCCGGGAGGGCCACTGGAGCTGTGGCCGCTGC TCTTCAGCCAGACGTTCGCGGACCTGGCGCAGCGGCTGCTGCAGGATTCG CTGGCCGATGCCGCGGACCGCGTCATCCGCCGCCTGGACATCGTGCTCCT GGCCGCGACCACCGGCGCCGTCGTCGCGTGGCCACCGCCGCCGCCGCTCC TGCGCGGATGCGACTGCGCAAAGGGAGCTTCAACAGCCGCTGCAGCAGCC GGCGCAGCATTGACGTCGACGGCGGCGGCAGTGATGGCGCCGGGAGCGGC GGCTGCGGCGACGGCAGCGGCGGGCGCCGCGCCGCCGCCGCCGCGTCTGG CGGCGCACGAGGTGCTGGCGACAGCGGATAGCGTGGCGTCGCTGCTGAGC GCGCAGCTGACGCGCCTGTCGCGGGACGCCTGGAACTTGGTGCAGCAGGG CGACAGCGTTGCAGCCGCCGCCCTCAGCACGTCCCTGTACCTGCGCTCGG TGGAGACGCTGGCGCGCCTCGCCAACCACCTCCGCCAGACGCTCGAGGCG CTGTCCGCCGCCGCGGCGGCGGCGCTGAGTGGTGGCGGCGGTGGAGGCGG CGGCGGCAGCAGCGGCACGGCTTGGGGTCTGCCGGCGGCCGCGGCGGCTG CGGCGTCGGCAGATGAGGCGGCGGCGCTGGTTGACGCGGCGATGCTGGTG GGGCGCGTCTGCTGGCTGTTGCTCGGCCCCCGCGGGCGGGCGCTGCGGCA TGTGCTGAGCCCGCCGACGGTCCTGACGCGTCCGTCGCCAGACCGCATCG GGCTTGACCAGCTCGAGGCCGCCTTCGAGATCGCTGACACGGACGGCGAC GGTGTGATGGACGCCGAGGAGGCGGCGGAGGCCGTCGCCGCAGTATCGGT TGCCGTGGTGGCCGCCCCGTTCGATGCCGACGGCGGCATCGGCGGCGTCG GCGGCGGCTGGGGCTGCCAGTCGCTGACTCGGCCCGAGTTCGCGCTATTC GCGACACCGCTGCTGGACGAGCAGCGGCCGCACGACTTCTTGCGGGAGTG CCTCGAGCATGTCATCGGCGCCGCGGTCGCCGCGTGGGCCGACTGGGCTC TTGCTGAGCCGATGCTAGCGCTATCTACGGCCGAAGCGCGCGTCGCCGCC GGCTGCGGCGGCGCTTCAAACTCCCGCGGTGACAGCAGTGGCGGGGGCGG CGGCGGCGGCGGCGGAAATAGCGGTGCGGACGGGGCGGCGGCGGCGGCAG CGCTGACGGACGAGGAGTGGCGGCAGCGGCACGGCCTGTGGGAGGAGAAG GCGGTCGAGCTCTCCGCCGCCGCCGGCGACGACACCGTGGAGGAGCGCAT GTGGTTCCCTGCCGTAGTGTCGCCGCCCGTCACCTGCTACCTGCAGCGGC TGACTACCGAGCTCTGCCGTGCCATGTCCATGGCAGACTACGCCGTTGTC GCCGACGCGGACGCTGGCACTGATGCCAATGTGGACATTTTGGGGGCGGC GCGGACGCGGGTGGCGGCGCGGGCGGCGGCGGAGTTGGCGGCACTGTACG GGCGGCTTTGCGTGGGATCGGCGGCCCCGGCGAGGCGCGCCTGCGAGGCG ATGCGGCTGCAGTGCCTGCTGGACTGCTTCTTCCTATCGCGGTGGCTGCC GGCTGGCGGCGGCGGCGGTGCGGCCGCTGGGGGCGCCGGGGACGCCTTCG TGGCCGCCGCCGAAGCGTTATGCGACGACATCGATCCCATCAACCTCCAG ATTTACCTGCCACATCTTCGGGCTGCTGCGCGCGCCAGCGGCGATGTTGG CCGCATCTTCTTGTCGGCGCTTTTTCCCGCCGCCGGAGGGGCCCCGGGCG GGGGCGCTGGCGGGGGAAGCGGCGGCGGCAGCGGCGGCGGCGGCTTTAGC CGCCCGGAAGAGCTCTTGTCGGCTGGGACAAATGTGGTGGCGCTGGCGCC GCGCGTGCACCGGTTCGACCTCTTGCCGCTGCCGCTGCCGCCGGCCGCCC GGAGCGGCGGCGGAGGCGGCAGCGCAGGAGCGGCGGGAGCGGTCGTCGCC GGGCGGGACGGGCTGCCGGGGGCGGGTGGGCTTGACGCCGGCGGCCGAGT AAAGGCAGTGGGCGGACAGGCGCTTGCGCGGGCGGCGGGGCTGATGGGCC AGGCGGAGAGCATGCGGCAAGCGGTGCAACCACTCTCGAACATCTTCGGC GCGGCGTCGTCCTTCCTGGGTGGTGGGCGGCGCAAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1019:1595..5233-

>mRNA_P-wetherbeei_contig1019.1.1 ID=mRNA_P-wetherbeei_contig1019.1.1|Name=mRNA_P-wetherbeei_contig1019.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1965bp|location=Sequence derived from alignment at P-wetherbeei_contig1019:1595..5233- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCGGACCGCGTCATCCGCCGCCTGGACATCGTGCTCCTGGCCGCG
ACCACCGGCGCCGTCGTCGCTGATGGCGCCGGGAGCGGCGGCTGCGGCGA
CGGCAGCGGCGGGCGCCGCGCCGCCGCCGCCGCGTCTGGCGGCGCACGAG
GTGCTGGCGACAGCGGATAGCGTGGCGTCGCTGCTGAGCGCGCAGCTGAC
GCGCCTGTCGCGGGACGCCTGGAACTTGGTGCAGCAGGGCGACAGCGTTG
CAGCCGCCGCCCTCAGCACGTCCCTGTACCTGCGCTCGGTGGAGACGCTG
GCGCGCCTCGCCAACCACCTCCGCCAGACGCTCGAGGCGCTGTCCGCCGC
CGCGGCGGCGGCGCTGAGTGGTGGCGGCGGTGGAGGCGGCGGCGGCAGCA
GCGGCACGGCTTGGGGTCTGCCGGCGGCCGCGGCGGCTGCGGCGTCGGCA
GATGAGGCGGCGGCGCTGGTTGACGCGGCGATGCTGGTGGGGCGCGTCTG
CTGGCTGTTGCTCGGCCCCCGCGGGCGGGCGCTGCGGCATGTGCTGAGCC
CGCCGACGGTCCTGACGCGTCCGTCGCCAGACCGCATCGGGCTTGACCAG
CTCGAGGCCGCCTTCGAGATCGCTGACACGGACGGCGACGGTGTGATGGA
CGCCGAGGAGGCGGCGGAGGCCGTCGCCGCAGTATCGGTTGCCGTGGTGG
CCGCCCCGTTCGATGCCGACGGCGGCATCGGCGGCGTCGGCGGCGGCTGG
GGCTGCCAGTCGCTGACTCGGCCCGAGTTCGCGCTATTCGCGACACCGCT
GCTGGACGAGCAGCGGCCGCACGACTTCTTGCGGGAGTGCCTCGAGCATG
TCATCGGCGCCGCGGTCGCCGCGTGGGCCGACTGGGCTCTTGCTGAGCCG
ATGCTAGCGCTATCTACGGCCGAAGCGCGCGTCGCCGCCGGCTGCGGCGG
CGCTTCAAACTCCCGCGGTGACAGCACGCTGACGGACGAGGAGTGGCGGC
AGCGGCACGGCCTGTGGGAGGAGAAGGCGGTCGAGCTCTCCGCCGCCGCC
GGCGACGACACCGTGGAGGAGCGCATGTGGTTCCCTGCCGTAGTGTCGCC
GCCCGTCACCTGCTACCTGCAGCGGCTGACTACCGAGCTCTGCCGTGCCA
TGTCCATGGCAGACTACGCCGTTGTCGCCGACGCGGACGCTGGCACTGAT
GCCAATGTGGACATTTTGGGGGCGGCGCGGACGCGGGTGGCGGCGCGGGC
GGCGGCGGAGTTGGCGGCACTGTACGGGCGGCTTTGCGTGGGATCGGCGG
CCCCGGCGAGGCGCGCCTGCGAGGCGATGCGGCTGCAGTGCCTGCTGGAC
TGCTTCTTCCTATCGCGGTGGCTGCCGGCTGGCGGCGGCGGCGGTGCGGC
CGCTGGGGGCGCCGGGGACGCCTTCGTGGCCGCCGCCGAAGCGTTATGCG
ACGACATCGATCCCATCAACCTCCAGATTTACCTGCCACATCTTCGGGCT
GCTGCGCGCGCCAGCGGCGATGTTGGCCGCATCTTCTTGTCGGCGCTTTT
TCCCGCCGCCGGAGGGGCCCCGGGCGGGGGCGCTGGCGGGGGAAGCGGCG
GCGGCAGCGGCGGCGGCGGCTTTAGCCGCCCGGAAGAGCTCTTGTCGGCT
GGGACAAATGTGGTGGCGCTGGCGCCGCGCGTGCACCGGTTCGACCTCTT
GCCGCTGCCGCTGCCGCCGGCCGCCCGGAGCGGCGGCGGAGGCGGCAGCG
CAGGAGCGGCGGGAGCGGTCGTCGCCGGGCGGGACGGGCTGCCGGGGGCG
GGTGGGCTTGACGCCGGCGGCCGAGTAAAGGCAGTGGGCGGACAGGCGCT
TGCGCGGGCGGCGGGGCTGATGGGCCAGGCGGAGAGCATGCGGCAAGCGG
TGCAACCACTCTCGAACATCTTCGGCGCGGCGTCGTCCTTCCTGGGTGGT
GGGCGGCGCAAGTGA
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