prot_P-wetherbeei_contig10054.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10054.1.1
Unique Nameprot_P-wetherbeei_contig10054.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length326
Homology
BLAST of mRNA_P-wetherbeei_contig10054.1.1 vs. uniprot
Match: D7FJQ3_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ3_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 2.940e-49
Identity = 91/204 (44.61%), Postives = 128/204 (62.75%), Query Frame = 0
Query:  124 WGMYREKFKRLLSRIGREQFMLDVYDAESRRSANKARLKPRAELEQAARRAAAAQXXXXXTVRAIAEAHTEGARWDHLEDDD--GVDVDDVACTRCGRRDADDADDLLLCDFRSCYRAFHQRCLVPPVPPEDMPDEEDDWFCPQCECLTDCLELLEELYPGRRFESWRDVFPELETGGGTAAAGHGVGGGDTSEEDEDFTLEED 325
            W   R KFK LL ++ R+   L VY  +  +S+ + +LKP AELE+A  R    Q       R + E +  G RW  +++D    ++VD++ CT+CG+ D+DD DD+LLCD+  C+RA+HQ CL PP+ PE  P+EE+DWFC QCECLTDC E+LE  + G +F SW+DVFP +ETG    AAG        S+ED+D + + D
Sbjct:   21 WDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELEKARERIRGIQAELREVTRRLTEMNPGGLRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQGEKFTSWKDVFPVVETGAEGGAAGQQDVLPTDSDEDDDESFKAD 224          
BLAST of mRNA_P-wetherbeei_contig10054.1.1 vs. uniprot
Match: A0A6H5KZT3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZT3_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 9.870e-48
Identity = 85/184 (46.20%), Postives = 119/184 (64.67%), Query Frame = 0
Query:  124 WGMYREKFKRLLSRIGREQFMLDVYDAESRRSANKARLKPRAELEQAARRAAAAQXXXXXTVRAIAEAHTEGARWDHLEDDD--GVDVDDVACTRCGRRDADDADDLLLCDFRSCYRAFHQRCLVPPVPPEDMPDEEDDWFCPQCECLTDCLELLEELYPGRRFESWRDVFPELETGGGTAAAG 305
            W   R KFK LL ++ R+   L VY  +  +S+ + +LKP AELE+A  +    Q       R + E +  G RW  +++D    ++VD++ CT+CG+ D+DD DD+LLCD+  C+RA+HQ CL PP+ PE  P+EE+DWFC QCECLTDC E+LE  + G +F SW+DVFP +ETG    AAG
Sbjct:  156 WDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELEKAREKIRGIQAELREVTRRLTEMNPGGLRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQGEKFTSWKDVFPVVETGAEGGAAG 339          
BLAST of mRNA_P-wetherbeei_contig10054.1.1 vs. uniprot
Match: A0A2K1Z5B7_POPTR (Uncharacterized protein n=4 Tax=Populus TaxID=3689 RepID=A0A2K1Z5B7_POPTR)

HSP 1 Score: 106 bits (264), Expect = 1.230e-21
Identity = 64/203 (31.53%), Postives = 101/203 (49.75%), Query Frame = 0
Query:  122 DEWGMYREKFKRLLSRIGREQFMLDVYDAESRRSANKARLKPRAELEQAARRAAAAQXXXXXTVRAIAEAHTEGARWDHLEDDDG-VDVDDVACTRCGRRDADDADDLLLCDFRSCYRAFHQRCLVPPVPPEDMPDEEDDWFCPQCECLTDCLELLEELYPGRRF---ESWRDVFPELETGGGTAAAGHGVGGGDTSEEDEDF 320
            DE+   R   + LL+R+  EQ ++  Y  E  +  +  +LKP  EL++A       +       + I    +EG     L D +G +D +D+ C +CG +D +  +D++LCD  +C R FHQ CL+PP+  ED+P +++ W CP C+C  DC+ LL +   G      +SW  VFPE           H  G      +D D+
Sbjct:  381 DEYSKIRAHLRYLLNRMSYEQSLITAYSGEGWKGLSLEKLKPEKELQRATSEITRRKVKIRDLFQHIDSLCSEGRFPSSLFDSEGQIDSEDIFCAKCGSKDLNADNDIILCDG-ACDRGFHQFCLIPPLLREDIPPDDEGWLCPGCDCKVDCIGLLNDSQ-GTNISISDSWEKVFPEAAATASGQKLDHNFGPSSDDSDDNDY 581          
BLAST of mRNA_P-wetherbeei_contig10054.1.1 vs. uniprot
Match: L1JX63_GUITC (PHD-type domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JX63_GUITC)

HSP 1 Score: 102 bits (254), Expect = 4.800e-21
Identity = 58/174 (33.33%), Postives = 96/174 (55.17%), Query Frame = 0
Query:  128 REKFKRLLSRIGREQFMLDVYDAESRRSANKARLKPRAELEQAARRAAAAQXXXXXTVRAIAEAHTEGARWDHLEDD-----DGVDVDDVACTRCGRRDADDADDLLLCDFRSCYRAFHQRCLVPPVPPEDMPDEEDDWFCPQCECLTDCLELLEELYPGRRFESWRDVFPELE 296
            R + K  L+     Q MLD Y+ +    ++  +LKP  EL++++     A+      ++ +  A  E A+ +   D+     +G+  + + C+ CG  DA   +D+LLCD+  C RAFHQ+C  P V   ++P +++DWFC  C C TDC+E + EL+ G  + +W  +FPELE
Sbjct:  136 RNRIKTRLTNARYFQTMLDAYEQDGWGPSSHRKLKPTEELKKSSESLIHAKKEIKELLKQMDPASNELAQKETRIDEREYEAEGLAFEKIVCSICGTGDARRGNDILLCDYSECNRAFHQKCHHPQV--TELPHDDEDWFCTHCLCYTDCIEAVNELF-GTHYTTWEKMFPELE 306          
BLAST of mRNA_P-wetherbeei_contig10054.1.1 vs. uniprot
Match: A0A4U6VCS7_SETVI (PHD-type domain-containing protein n=1 Tax=Setaria viridis TaxID=4556 RepID=A0A4U6VCS7_SETVI)

HSP 1 Score: 103 bits (258), Expect = 4.890e-21
Identity = 55/183 (30.05%), Postives = 101/183 (55.19%), Query Frame = 0
Query:  118 KPALDEWGMYREKFKRLLSRIGREQFMLDVYDAESRRSANKARLKPRAELEQAARRAAAAQXXXXXTVRAIAEAHTEGARWDHLEDDDG-VDVDDVACTRCGRRDADDADDLLLCDFRSCYRAFHQRCLVPPVPPEDMPDEEDDWFCPQCECLTDCLELLEELYPGRRF--ESWRDVFPELET 297
            K + DE+   R++ + +L+R+  EQ +++ Y +E  ++ +  +++P  ELE+A       +       + +    ++G   + L D +G +  +D+ C  CG +D    +D++LCD  +C R FHQ CL PP+  ED+P+ ++ W CP C+C  DC++++ +L        +SW  VFPE  T
Sbjct:  120 KSSTDEFSQIRKRVRYILNRMNYEQSLIEAYASEGWKNQSLDKIRPEKELERAKAEILRCKLRIREVFQNLDSLLSKGKIDESLFDSEGEISCEDIFCANCGSKDVTLGNDIILCDG-ACDRGFHQNCLNPPLRTEDIPEGDEGWLCPACDCKIDCIDVINDLQGSDLSIDDSWEKVFPEAAT 301          
BLAST of mRNA_P-wetherbeei_contig10054.1.1 vs. uniprot
Match: A0A2T7EBF1_9POAL (Uncharacterized protein n=6 Tax=Panicum TaxID=4539 RepID=A0A2T7EBF1_9POAL)

HSP 1 Score: 104 bits (259), Expect = 4.940e-21
Identity = 56/184 (30.43%), Postives = 102/184 (55.43%), Query Frame = 0
Query:  114 SEERKPALDEWGMYREKFKRLLSRIGREQFMLDVYDAESRRSANKARLKPRAELEQAARRAAAAQXXXXXTVRAIAEAHTEGARWDHLEDDDG-VDVDDVACTRCGRRDADDADDLLLCDFRSCYRAFHQRCLVPPVPPEDMPDEEDDWFCPQCECLTDCLELLEELYPGRRF--ESWRDVFPE 294
            S+  K + DE+   R++ + +L+R+  EQ +++ Y +E  ++ +  +++P  ELE+A       +       + +    ++G   + L D +G +  +D+ C  CG +D    +D++LCD  +C R FHQ CL PP+  ED+P+ ++ W CP C+C  DC++++ EL        +SW  VFPE
Sbjct:  111 SKSNKSSTDEFSQIRKRVRYILNRMNYEQSLIEAYASEGWKNQSLDKIRPEKELERAKAEILRCKLRIREVFQNLDSLLSKGKIDESLFDSEGEISCEDIFCATCGSKDVTLGNDIILCDG-ACDRGFHQNCLNPPLRTEDIPEGDEGWLCPACDCKIDCIDIINELQGSDLSIDDSWEKVFPE 293          
BLAST of mRNA_P-wetherbeei_contig10054.1.1 vs. uniprot
Match: A0A368QG13_SETIT (Uncharacterized protein n=7 Tax=Setaria TaxID=4554 RepID=A0A368QG13_SETIT)

HSP 1 Score: 103 bits (258), Expect = 6.780e-21
Identity = 55/183 (30.05%), Postives = 101/183 (55.19%), Query Frame = 0
Query:  118 KPALDEWGMYREKFKRLLSRIGREQFMLDVYDAESRRSANKARLKPRAELEQAARRAAAAQXXXXXTVRAIAEAHTEGARWDHLEDDDG-VDVDDVACTRCGRRDADDADDLLLCDFRSCYRAFHQRCLVPPVPPEDMPDEEDDWFCPQCECLTDCLELLEELYPGRRF--ESWRDVFPELET 297
            K + DE+   R++ + +L+R+  EQ +++ Y +E  ++ +  +++P  ELE+A       +       + +    ++G   + L D +G +  +D+ C  CG +D    +D++LCD  +C R FHQ CL PP+  ED+P+ ++ W CP C+C  DC++++ +L        +SW  VFPE  T
Sbjct:  120 KSSTDEFSQIRKRVRYILNRMNYEQSLIEAYASEGWKNQSLDKIRPEKELERAKAEILRCKLRIREVFQNLDSLLSKGKIDESLFDSEGEISCEDIFCANCGSKDVTLGNDIILCDG-ACDRGFHQNCLNPPLRTEDIPEGDEGWLCPACDCKIDCIDVINDLQGSDLSIDDSWEKVFPEAAT 301          
BLAST of mRNA_P-wetherbeei_contig10054.1.1 vs. uniprot
Match: A0A5J9UAE6_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UAE6_9POAL)

HSP 1 Score: 103 bits (258), Expect = 6.960e-21
Identity = 66/207 (31.88%), Postives = 108/207 (52.17%), Query Frame = 0
Query:  122 DEWGMYREKFKRLLSRIGREQFMLDVYDAESRRSANKARLKPRAELEQAARRAAAAQXXXXXTVRAIAEAHTEGARWDHLEDDDG-VDVDDVACTRCGRRDADDADDLLLCDFRSCYRAFHQRCLVPPVPPEDMPDEEDDWFCPQCECLTDCLELLEELYPGRRF--ESWRDVFPELETGGGTAAAGHGVGGGDTSEEDEDFTLEED 325
            DE+   R++ + +L+R+  EQ +L+ Y  +  +S +  +++P  ELE+A       +       + +    ++G   + L D DG +  +D+ C  CG +D    +D++LCD   C R FHQ CL PP+  ED+PD ++ W CP C+C  DC++++ EL        +SW  VFPE       AA  +G      S++DE F L  D
Sbjct:  130 DEFSQIRKRVRYILNRMNYEQSLLEAYANDGWKSQSLEKIRPEKELERAKGEILRCKLRIREVFQNLDSLLSKGKIDESLFDSDGEIACEDIFCATCGSKDVTLNNDIILCDG-VCDRGFHQNCLTPPLLTEDIPDGDEGWLCPACDCKIDCIDVINELQGSDLSVDDSWEKVFPEA------AALANG------SKQDETFDLPSD 323          
BLAST of mRNA_P-wetherbeei_contig10054.1.1 vs. uniprot
Match: C1EG75_MICCC (Uncharacterized protein n=3 Tax=Micromonas TaxID=38832 RepID=C1EG75_MICCC)

HSP 1 Score: 102 bits (255), Expect = 1.050e-20
Identity = 64/163 (39.26%), Postives = 90/163 (55.21%), Query Frame = 0
Query:  135 LSRIGREQFMLDVYDAESRRSANKARLKPRAELEQAARRAAAAQXXXXXTVRAIAEAHTEGARWDHLEDDDG-VDVDDVACTRCGRRDADDADDLLLCDFRSCYRAFHQRCLVPPVPPEDMPDEEDDWFCPQCECLTDCLELLE---ELYPGRRFESWRDVFP 293
            LS I REQ  +D Y+ +  + A++ +L+P  E+ ++  +    +       R I     E +  D +E+D G VDV+DV C RC   DA D +D+L+CD   C RAFHQRC+VPPV  +++PDE   W CP C+   DC   L    +L       SWRDVFP
Sbjct:   81 LSTIRREQHHIDAYEMDGWKGASREKLRPADEIRKSQVKIFNCKLKVRDMFRDIDMDTGEVSFRDRIEEDTGEVDVEDVVCARCADGDATDENDILICDGY-CDRAFHQRCVVPPVKADEIPDE---WLCPLCDARVDCFYTLNADFDLELDAADASWRDVFP 239          
BLAST of mRNA_P-wetherbeei_contig10054.1.1 vs. uniprot
Match: A0A835ERF7_9POAL (Uncharacterized protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835ERF7_9POAL)

HSP 1 Score: 103 bits (256), Expect = 1.230e-20
Identity = 56/180 (31.11%), Postives = 99/180 (55.00%), Query Frame = 0
Query:  118 KPALDEWGMYREKFKRLLSRIGREQFMLDVYDAESRRSANKARLKPRAELEQAARRAAAAQXXXXXTVRAIAEAHTEGARWDHLEDDDG-VDVDDVACTRCGRRDADDADDLLLCDFRSCYRAFHQRCLVPPVPPEDMPDEEDDWFCPQCECLTDCLELLEELYPGRR--FESWRDVFPE 294
            K + DE+   R++ + +L+R+  EQ ++D Y +E  ++ +  +++P  ELE+A       +       + +    ++G   + L D +G +  DD+ C  CG +D    +D++LCD  +C R FHQ CL PP+  E++P  ++ W CP C+C  DC++++ EL        +SW  VFPE
Sbjct:  117 KSSTDEFSQIRKRVRYILNRMKYEQNLIDAYASEGWKNQSLDKIRPEKELERAKAEILRCKLRIREAFQNLDCLLSKGKIDESLFDSEGEISCDDIFCATCGSKDVTSGNDIILCDG-ACDRGFHQNCLNPPLRTEEIPQGDEGWLCPACDCKIDCIDVINELQGSDLSIVDSWEKVFPE 295          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10054.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJQ3_ECTSI2.940e-4944.61PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KZT3_9PHAE9.870e-4846.20PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A2K1Z5B7_POPTR1.230e-2131.53Uncharacterized protein n=4 Tax=Populus TaxID=3689... [more]
L1JX63_GUITC4.800e-2133.33PHD-type domain-containing protein n=1 Tax=Guillar... [more]
A0A4U6VCS7_SETVI4.890e-2130.05PHD-type domain-containing protein n=1 Tax=Setaria... [more]
A0A2T7EBF1_9POAL4.940e-2130.43Uncharacterized protein n=6 Tax=Panicum TaxID=4539... [more]
A0A368QG13_SETIT6.780e-2130.05Uncharacterized protein n=7 Tax=Setaria TaxID=4554... [more]
A0A5J9UAE6_9POAL6.960e-2131.88Uncharacterized protein n=1 Tax=Eragrostis curvula... [more]
C1EG75_MICCC1.050e-2039.26Uncharacterized protein n=3 Tax=Micromonas TaxID=3... [more]
A0A835ERF7_9POAL1.230e-2031.11Uncharacterized protein n=2 Tax=Digitaria exilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 50..82
NoneNo IPR availableCOILSCoilCoilcoord: 164..187
NoneNo IPR availableGENE3D2.30.30.1150coord: 127..268
e-value: 1.4E-14
score: 56.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..122
NoneNo IPR availablePANTHERPTHR12628POLYCOMB-LIKE TRANSCRIPTION FACTORcoord: 45..315
NoneNo IPR availablePANTHERPTHR12628:SF13HOMEOBOX PROTEIN HAT3.1coord: 45..315
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 213..267
e-value: 3.3E-11
score: 53.2
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 214..268
e-value: 8.4E-10
score: 38.4
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 211..269
score: 10.4601
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 214..266
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 201..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10054contigP-wetherbeei_contig10054:344..1321 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10054.1.1mRNA_P-wetherbeei_contig10054.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10054 126..1321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10054.1.1 ID=prot_P-wetherbeei_contig10054.1.1|Name=mRNA_P-wetherbeei_contig10054.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=326bp
MSDKEASEMEHQPKKRARSYPVKTRGMAGILTPKLSFPEAAAPSSSSKKR
RREKETEKDKEAEKEEEKKTATKKQKNEREKKKRPPPPVSTSEKRTRERR
RRKDKNAMKEVEASEERKPALDEWGMYREKFKRLLSRIGREQFMLDVYDA
ESRRSANKARLKPRAELEQAARRAAAAQAEARATVRAIAEAHTEGARWDH
LEDDDGVDVDDVACTRCGRRDADDADDLLLCDFRSCYRAFHQRCLVPPVP
PEDMPDEEDDWFCPQCECLTDCLELLEELYPGRRFESWRDVFPELETGGG
TAAAGHGVGGGDTSEEDEDFTLEEDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD