mRNA_P-wetherbeei_contig9986.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9986.1.1
Unique NamemRNA_P-wetherbeei_contig9986.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9986.1.1 vs. uniprot
Match: A0A6H5JDR2_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR2_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.550e-28
Identity = 53/108 (49.07%), Postives = 69/108 (63.89%), Query Frame = 1
Query:    4 RGLYADQLERWYSLFPRSQILVLDSNELFANFTGVLDRVTAFAGLQPFAYEYDPSRRFPDGKCRPGGEVRYAELREQMAATGDEDALRAFFAPHNERLFRLLGRDLGW 327
            RGLYADQLERW+ ++PRSQILVL+S+E+F NFTG LD+V    GL P  YEYD   +     C       +AE         D+  L+ ++ PHNERL+RLLGR++ W
Sbjct:  424 RGLYADQLERWFRVYPRSQILVLESSEMFGNFTGTLDKVARHIGLPPHGYEYDSRHQHASAPCERNHPELFAEGGRYQKMLEDQRVLQEWYRPHNERLYRLLGREMPW 531          
BLAST of mRNA_P-wetherbeei_contig9986.1.1 vs. uniprot
Match: A0A6H5KMM8_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM8_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 3.710e-22
Identity = 50/114 (43.86%), Postives = 69/114 (60.53%), Query Frame = 1
Query:    4 RGLYADQLERWYSLFPRSQILVLDSNELFANFTGVLDRVTAFAGLQPFAYEYDPSRRFPDGKC---RP---GGEVRYAELREQMAATGDEDALRAFFAPHNERLFRLLGRDLGW 327
            RGLYADQLERW+++F RSQILV+DS+EL+ +F   L+R     GL P  + Y+   +   G C   RP   G + RY ++ EQ      E   R ++ PHNERL+ L+G+D  W
Sbjct:  109 RGLYADQLERWFAVFSRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYNSDFQHSTGACKENRPQFFGEDGRYKKMLEQ------EQLFRDWYRPHNERLYSLIGKDFKW 216          
BLAST of mRNA_P-wetherbeei_contig9986.1.1 vs. uniprot
Match: D7G3W5_ECTSI (Similar to heparan sulfate sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W5_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 8.120e-19
Identity = 47/109 (43.12%), Postives = 66/109 (60.55%), Query Frame = 1
Query:   19 DQLERWYSLFPRSQILVLDSNELFANFTGVLDRVTAFAGLQPFAYEYDPSRRFPDGKC---RP---GGEVRYAELREQMAATGDEDALRAFFAPHNERLFRLLGRDLGW 327
            +QLERW+++FPRSQILV+DS+EL+ +F   L+R     GL P  + YD   +   G C   RP   G + RY ++ EQ      E   R ++ PHNERL+ L+G+DL W
Sbjct:  269 NQLERWFAVFPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDSDFQHGTGACKDNRPQFFGEDGRYKKMLEQ------EQLFRDWYRPHNERLYSLIGKDLKW 371          
BLAST of mRNA_P-wetherbeei_contig9986.1.1 vs. uniprot
Match: D7G3W4_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W4_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 2.930e-18
Identity = 48/118 (40.68%), Postives = 65/118 (55.08%), Query Frame = 1
Query:    4 RGLYADQLERWYSLFPRSQILVLDSNELFANFTGVLDRVTAFAGLQPFAYEYDPSRRFPDGKCRP----------GGEVRYAELREQMAATGDEDALRAFFAPHNERLFRLLGRDLGW 327
            RGLYADQLERW+ +F +SQIL++DS  +  +  GVL  V A  GL    ++ D   +   G C            G E RY ++ E+      ED  R ++ PHNERLF+LLGR + W
Sbjct:  127 RGLYADQLERWFRVFDKSQILIVDSANMMEDLPGVLADVAAHIGLPGSDFDSDRPVQHSTGLCPALGRGEDPDFFGEEGRYDKMLEE------EDLFREWYRPHNERLFKLLGRSMMW 238          
BLAST of mRNA_P-wetherbeei_contig9986.1.1 vs. uniprot
Match: A0A7C1JAP0_9CHLR (Sulfotransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1JAP0_9CHLR)

HSP 1 Score: 82.0 bits (201), Expect = 1.340e-16
Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 1
Query:    4 RGLYADQLERWYSLFPRSQILVLDSNELFANFTGVLDRVTAFAGLQPFAYEYDPSRRFPDGKCRPGGEVRYAELREQMAATGDEDALRAFFAPHNERLFRLLGRDLGW 327
            RGLYADQL+R++ LFPR Q+L+L+S EL  +  G ++RVTAF GL+  ++++      P  K      +  A + ++  A      L AFF PHNERL+ +LG D  W
Sbjct:  171 RGLYADQLKRYFELFPREQLLILESGELRRDPVGTMNRVTAFIGLK--SHDWSQEEYHPANKG-----IYTAPMTDETRAL-----LSAFFRPHNERLYAMLGVDYDW 266          
BLAST of mRNA_P-wetherbeei_contig9986.1.1 vs. uniprot
Match: UPI001AF51203 (sulfotransferase domain-containing protein n=1 Tax=Luteitalea sp. TBR-22 TaxID=2802971 RepID=UPI001AF51203)

HSP 1 Score: 78.6 bits (192), Expect = 2.610e-15
Identity = 47/113 (41.59%), Postives = 61/113 (53.98%), Query Frame = 1
Query:    1 ARGLYADQLERWYSLFPRSQILVLDSNELFANFTGVLDRVTAFAGLQPFAYEYDPSRRFPDGKCRPGGEVRYAELREQMAATGDEDALRAF----FAPHNERLFRLLGRDLGW 327
            +RG YADQLERW++++PR QILVL S + F     V  RV  F GL+P+A    PS   P    R           + +    DE A RA+    +APHN RL  +L R+LGW
Sbjct:  163 SRGFYADQLERWFAVYPREQILVLRSEDFFRETASVYARVVEFLGLRPWA----PSAFTPYNVARS----------QALRVEPDEAATRAWLAATYAPHNVRLESMLERNLGW 261          
BLAST of mRNA_P-wetherbeei_contig9986.1.1 vs. uniprot
Match: A0A1H3PCF8_9CLOT (Sulfotransferase domain-containing protein n=1 Tax=Tindallia californiensis TaxID=159292 RepID=A0A1H3PCF8_9CLOT)

HSP 1 Score: 76.3 bits (186), Expect = 1.740e-14
Identity = 40/108 (37.04%), Postives = 55/108 (50.93%), Query Frame = 1
Query:    4 RGLYADQLERWYSLFPRSQILVLDSNELFANFTGVLDRVTAFAGLQPFAYEYDPSRRFPDGKCRPGGEVRYAELREQMAATGDEDALRAFFAPHNERLFRLLGRDLGW 327
            RG+Y DQLE WYSLFPR QILVL+    F +    +  V  F  +   ++E           C+P    +Y ++  +         LRA+F PHN+RL+R LGR   W
Sbjct:  164 RGIYVDQLEVWYSLFPRKQILVLEYENFFGDLPASMGIVCEFLEVSMHSFE-----------CKPLNVGKYTKMAPETRV-----GLRAYFEPHNQRLYRYLGRTYNW 255          
BLAST of mRNA_P-wetherbeei_contig9986.1.1 vs. uniprot
Match: A0A2E6EAV3_9GAMM (Sulfotransfer_1 domain-containing protein n=1 Tax=Woeseia sp. TaxID=1980636 RepID=A0A2E6EAV3_9GAMM)

HSP 1 Score: 76.3 bits (186), Expect = 3.530e-14
Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 1
Query:    4 RGLYADQLERWYSLFPRSQILVLDSNELFANFTGVLDRVTAFAGLQPFAYEYDPS-RRFPDGKCRPGGEVRYAELREQMAA--TGDEDALRAFFAPHNERLFRLLGRDLGW 327
            R LY DQ+ RW  LFPR Q++++ S + F      +++V  F GL+ F +E  P  +R  D   R       + L +  AA  TG    L  FF P+N++L+RLLG D GW
Sbjct:  217 RSLYCDQVHRWLRLFPRRQLMIIQSEQFFERKVETMNQVAEFLGLEFFKFETAPQLQRSWDAGVRDA-----SRLPQPYAAIDTGLRKTLAQFFDPYNKKLYRLLGEDFGW 322          
BLAST of mRNA_P-wetherbeei_contig9986.1.1 vs. uniprot
Match: A0A6I4SVC4_9SPHN (Uncharacterized protein n=1 Tax=Croceibacterium salegens TaxID=1737568 RepID=A0A6I4SVC4_9SPHN)

HSP 1 Score: 72.8 bits (177), Expect = 4.270e-14
Identity = 45/108 (41.67%), Postives = 57/108 (52.78%), Query Frame = 1
Query:    4 RGLYADQLERWYSLFPRSQILVLDSNELFANFTGVLDRVTAFAGLQPFAYEYDPSRRFPDGKCRPGGEVRYAELREQMAATGDEDALRAFFAPHNERLFRLLGRDLGW 327
            RGLYA QL+R++ LFPR Q+LVL+  EL       L ++ AF G+  FA         P    +P   V  +  RE+MA       L  F+APHNE LF LLGR   W
Sbjct:   34 RGLYARQLKRYFDLFPREQVLVLEDRELKEATERTLGKICAFLGVPDFA---------PGLDWQP---VFVSNYRERMAPQ-TRQFLAEFYAPHNEELFELLGRRFDW 128          
BLAST of mRNA_P-wetherbeei_contig9986.1.1 vs. uniprot
Match: A0A4P6K1P0_9CHLR (Sulfotransferase n=1 Tax=Ktedonosporobacter rubrisoli TaxID=2509675 RepID=A0A4P6K1P0_9CHLR)

HSP 1 Score: 75.1 bits (183), Expect = 7.020e-14
Identity = 39/113 (34.51%), Postives = 63/113 (55.75%), Query Frame = 1
Query:    1 ARGLYADQLERWYSLFPRSQILVLDSNELFANFTGVLDRVTAFAGLQPFAYEYDPSRRFPDGKCRPGGEVRYAELREQMAATGDEDALR----AFFAPHNERLFRLLGRDLGW 327
            ARG+YA+QLERW +LFPR ++L++ S + + + + +   V AF G+  F           + +    G   Y + ++  A    + ALR    A+F PHN+RL++LLGR+  W
Sbjct:  187 ARGIYAEQLERWLNLFPRERMLIIRSEDFYRDSSAIYKEVLAFLGVSVF-----------EPRSLQLGYKAYNKSKDSDAPAKMDPALRKRLVAYFEPHNQRLYKLLGRNFAW 288          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9986.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDR2_9PHAE3.550e-2849.07Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A6H5KMM8_9PHAE3.710e-2243.86Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
D7G3W5_ECTSI8.120e-1943.12Similar to heparan sulfate sulfotransferase n=1 Ta... [more]
D7G3W4_ECTSI2.930e-1840.68Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A7C1JAP0_9CHLR1.340e-1641.67Sulfotransferase n=1 Tax=Chloroflexi bacterium Tax... [more]
UPI001AF512032.610e-1541.59sulfotransferase domain-containing protein n=1 Tax... [more]
A0A1H3PCF8_9CLOT1.740e-1437.04Sulfotransferase domain-containing protein n=1 Tax... [more]
A0A2E6EAV3_9GAMM3.530e-1437.84Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A6I4SVC4_9SPHN4.270e-1441.67Uncharacterized protein n=1 Tax=Croceibacterium sa... [more]
A0A4P6K1P0_9CHLR7.020e-1434.51Sulfotransferase n=1 Tax=Ktedonosporobacter rubris... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9986contigP-wetherbeei_contig9986:204..1004 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G3W5
Model size327
Max annot lvl2880.D7G3W5|-
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.33e-19
EggNOG OGsKOG3704@1|root,KOG3704@2759|Eukaryota
Descriptionheparan sulfate sulfotransferase activity
Cds size327
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187119.8471406-CDS-P-wetherbeei_contig9986:203..4701683187119.8471406-CDS-P-wetherbeei_contig9986:203..470Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9986 204..470 -
1683187119.8722436-CDS-P-wetherbeei_contig9986:944..10041683187119.8722436-CDS-P-wetherbeei_contig9986:944..1004Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9986 945..1004 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9986.1.1prot_P-wetherbeei_contig9986.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9986 204..1004 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9986.1.1

>prot_P-wetherbeei_contig9986.1.1 ID=prot_P-wetherbeei_contig9986.1.1|Name=mRNA_P-wetherbeei_contig9986.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=109bp
ARGLYADQLERWYSLFPRSQILVLDSNELFANFTGVLDRVTAFAGLQPFA
YEYDPSRRFPDGKCRPGGEVRYAELREQMAATGDEDALRAFFAPHNERLF
RLLGRDLGW
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mRNA from alignment at P-wetherbeei_contig9986:204..1004-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9986.1.1 ID=mRNA_P-wetherbeei_contig9986.1.1|Name=mRNA_P-wetherbeei_contig9986.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig9986:204..1004- (Phaeothamnion wetherbeei SAG_119_79)
GCGCGGGGGCTCTACGCCGACCAGCTGGAGCGCTGGTACAGCCTCTTTCC GCGCTCCCAGGTGCGAAGCAATGACGGATGAGACAGGACAGCGTGGAGTC ATGTCTCGAGGCGACGCTGCCTTTCATCAGCCTTTTTCCTTTACCCCTCT AGCCCGTCATAACGCTGGCGCAAAAAGTTTGTAGATGCGCTTGCCTTAAA ACTGCTCAGAATTTCCGTTTTAGGAGGGAATTTGCGTTAGGGACTTCTTA GCTGTCGCAGCCGTGGCGAGGCGGCAGCAAAAATGCATTTCACCAGTCAA TGCTTTGCCCCTCCAAAAGGATGGCTTCTGCAATTTCCACGCCTCTATGT CTTCACCGTTTCCCATGAGACTTCCAGCCCGCGCACCGCCGATTCGTCTT TTCATCCCTCGAGATGCCCCGGTGGCCGTGACCTCTCAATGCAACCGTCA CACTCTTTCTGTTACTCCCTCTTTCACATTTCTCCGAAGCGGAAAGTCGA CCCGCACCCGTGCCCCGCCAAAATATGTCTGCAGATCCTTGTGCTGGACT CCAACGAACTCTTCGCCAACTTCACGGGGGTCCTCGACCGCGTCACCGCC TTCGCCGGCCTCCAGCCCTTCGCCTACGAGTATGACCCGTCCCGCCGCTT CCCCGACGGTAAGTGCCGCCCCGGCGGTGAGGTGCGCTACGCGGAACTCC GGGAGCAGATGGCGGCGACGGGAGACGAGGACGCGCTGCGGGCGTTCTTT GCGCCGCACAACGAGCGGCTGTTTCGGCTTTTGGGAAGGGACCTCGGCTG G
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9986:204..1004-

>mRNA_P-wetherbeei_contig9986.1.1 ID=mRNA_P-wetherbeei_contig9986.1.1|Name=mRNA_P-wetherbeei_contig9986.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig9986:204..1004- (Phaeothamnion wetherbeei SAG_119_79)
GCGCGGGGGCTCTACGCCGACCAGCTGGAGCGCTGGTACAGCCTCTTTCC
GCGCTCCCAGATCCTTGTGCTGGACTCCAACGAACTCTTCGCCAACTTCA
CGGGGGTCCTCGACCGCGTCACCGCCTTCGCCGGCCTCCAGCCCTTCGCC
TACGAGTATGACCCGTCCCGCCGCTTCCCCGACGGTAAGTGCCGCCCCGG
CGGTGAGGTGCGCTACGCGGAACTCCGGGAGCAGATGGCGGCGACGGGAG
ACGAGGACGCGCTGCGGGCGTTCTTTGCGCCGCACAACGAGCGGCTGTTT
CGGCTTTTGGGAAGGGACCTCGGCTGG
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